Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 1.4e-193 679.5 356 100.0
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 4.3e-182 641.3 356 91.3
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 4.9e-170 601.3 356 85.7
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 5.6e-166 587.8 356 81.2
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 2.0e-163 579.3 358 81.0
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 3.4e-163 578.6 352 80.4
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 2.2e-162 575.9 349 82.5
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 3.2e-161 572.0 349 82.2
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 2.7e-160 568.9 352 78.1
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 2.7e-160 568.9 352 79.3
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 3.5e-160 568.5 356 79.2
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 4.6e-160 568.2 349 81.4
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 5.1e-159 564.7 354 81.4
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 5.6e-158 561.2 347 79.0
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 2.1e-157 559.3 347 79.0
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 2.1e-157 559.3 356 78.4
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 5.2e-156 554.7 367 76.8
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 1.2e-155 553.5 354 76.3
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 1.2e-155 553.5 356 80.1
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 1.2e-155 553.5 347 77.8
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 1.5e-155 553.1 352 76.4
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 2.0e-155 552.7 343 79.9
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 2.6e-155 552.4 347 77.2
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 4.4e-155 551.6 313 83.4
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 7.6e-155 550.8 354 75.4
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 7.6e-155 550.8 349 76.8
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 9.9e-155 550.4 346 76.0
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 1.7e-154 549.7 349 76.5
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 2.9e-154 548.9 345 77.1
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 3.8e-154 548.5 354 76.0
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 3.8e-154 548.5 355 79.2
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 4.9e-154 548.1 347 75.8
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 4.9e-154 548.1 351 78.3
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 6.4e-154 547.7 349 76.5
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 3.2e-153 545.4 347 75.8
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 5.4e-153 544.7 319 80.9
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 7.1e-153 544.3 349 75.9
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 1.2e-152 543.5 344 78.8
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 2.1e-152 542.7 321 78.8
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 4.6e-152 541.6 311 82.0
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 6.0e-152 541.2 348 75.0
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 7.8e-152 540.8 350 74.9
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 1.0e-151 540.4 347 75.2
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 2.3e-151 539.3 341 76.0
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 2.3e-151 539.3 318 80.2
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 8.7e-151 537.3 355 74.4
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 1.1e-150 537.0 311 82.0
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 1.5e-150 536.6 347 74.9
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 3.3e-150 535.4 352 73.0
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 4.3e-150 535.0 352 75.0
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 5.6e-150 534.6 313 80.2
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 7.3e-150 534.3 304 82.6
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 9.6e-150 533.9 346 75.7
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 2.8e-149 532.3 352 74.4
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 2.8e-149 532.3 352 74.4
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 3.6e-149 531.9 349 74.8
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 4.8e-149 531.6 351 75.2
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 1.1e-148 530.4 354 73.4
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 1.4e-148 530.0 317 79.8
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 3.1e-148 528.9 352 73.9
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 1.2e-147 526.9 350 74.0
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 1.2e-147 526.9 316 79.1
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 1.2e-147 526.9 349 74.2
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 1.5e-147 526.6 352 73.6
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 1.5e-147 526.6 305 81.6
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 4.4e-147 525.0 346 73.1
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 4.4e-147 525.0 349 73.1
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 7.6e-147 524.2 352 73.6
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 1.3e-146 523.5 350 73.1
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 2.2e-146 522.7 352 72.7
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 2.9e-146 522.3 347 72.6
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 2.9e-146 522.3 308 83.1
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 3.8e-146 521.9 317 78.9
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 3.2e-145 518.8 346 72.5
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 3.5e-144 515.4 342 72.2
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 2.3e-143 512.7 349 75.9
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 1.6e-141 506.5 352 72.7
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 9.0e-140 500.7 318 73.6
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 2.4e-137 492.7 348 69.3
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 1.6e-136 490.0 348 68.7
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 7.9e-136 487.6 349 69.9
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 3.0e-135 485.7 362 66.9
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 9.6e-134 480.7 349 68.8
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 2.0e-131 473.0 263 87.1
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 5.5e-129 464.9 309 69.6
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 1.5e-126 456.8 319 67.4
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 5.8e-123 444.9 349 65.6
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 1.9e-121 439.9 252 84.5
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 6.1e-120 434.9 304 67.8
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 2.5e-118 429.5 357 63.9
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 1.3e-117 427.2 367 61.9
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 5.5e-113 411.8 528 46.8
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 1.6e-112 410.2 349 61.6
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 2.0e-110 403.3 313 64.9
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 7.4e-110 401.4 229 82.1
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 2.9e-106 389.4 222 82.9
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 2.9e-106 389.4 253 76.3
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 1.1e-102 377.5 258 73.3
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 4.5e-91 339.0 192 83.9
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 9.8e-86 321.2 339 53.7
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 5.2e-79 298.9 165 83.0
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 1.6e-75 287.3 177 79.7
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 8.0e-72 275.0 217 59.9
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 5.7e-70 268.9 363 40.8
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 2.1e-64 250.4 321 43.9
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 2.4e-60 236.9 128 82.0
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 1.1e-57 228.0 127 85.0
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 6.6e-50 202.2 345 36.8
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 1.1e-49 201.4 326 38.7
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 2.0e-46 190.7 126 71.4
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 5.6e-41 172.6 97 83.5
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 1.1e-39 168.3 100 74.0
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 5.4e-36 156.0 84 86.9
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 5.4e-28 129.4 85 68.2
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 3.3e-25 120.2 62 88.7
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.9e-17 94.4 76 57.9
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 9.6e-17 92.0 56 87.5
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.0e-10 72.0 44 68.2
MELO3C033538.2 Cucumis melo HOM05D006459 ORTHO05D169875 2.1e-08 64.3 167 28.7
Lsat_1_v5_gn_2_49420 Lactuca sativa HOM05D006459 ORTHO05D008414 1.2e-06 58.5 30 86.7


User provided reference genes

Program Settings