Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0074800 Salix brachista HOM05D004876 ORTHO05D005488 5.7e-59 230.7 117 100.0
Potri.019G061200 Populus trichocarpa HOM05D004876 ORTHO05D005488 7.0e-49 197.2 112 90.2
ClCG07G004830 Citrullus lanatus HOM05D004876 ORTHO05D005488 9.8e-43 176.8 112 80.4
MBI15_g39395_MAGBIO Magnolia biondii HOM05D004876 ORTHO05D005488 1.7e-42 176.0 112 78.6
CsaV3_5G010740 Cucumis sativus L. HOM05D004876 ORTHO05D005488 2.2e-42 175.6 112 79.5
QL08p065087 Quercus lobata HOM05D004876 ORTHO05D005488 2.2e-42 175.6 113 80.5
Ca_29868_v3 Cicer arietinum L. HOM05D000260 ORTHO05D000318 4.8e-42 174.5 108 81.5
MELO3C020110.2 Cucumis melo HOM05D004876 ORTHO05D005488 8.3e-42 173.7 112 79.5
Lj1g0004349 Lotus japonicus HOM05D004876 ORTHO05D005488 8.3e-42 173.7 112 80.4
Sed0020097 Sechium edule HOM05D004876 ORTHO05D005488 1.1e-41 173.3 112 79.5
Atru.chr12.194 Acer truncatum HOM05D004876 ORTHO05D005488 1.8e-41 172.6 112 79.5
CiPaw.04G175400 Carya illinoinensis HOM05D004876 ORTHO05D005488 3.1e-41 171.8 112 78.6
CiPaw.02G093900 Carya illinoinensis HOM05D004876 ORTHO05D005488 5.4e-41 171.0 112 77.7
Duzib114G0677 Durio zibethinus HOM05D004876 ORTHO05D005488 7.0e-41 170.6 112 77.7
Prupe.2G265600 Prunus persica HOM05D004876 ORTHO05D005488 1.2e-40 169.9 112 77.7
MD01G1169400 Malus domestica HOM05D004876 ORTHO05D005488 4.5e-40 167.9 112 76.8
Phvul.009G042700 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 1.0e-39 166.8 112 75.0
RcHm_v2.0_Chr1g0372561 Rosa chinensis HOM05D004876 ORTHO05D005488 1.0e-39 166.8 112 77.7
Cpa.g.sc128.23 Carica papaya HOM05D004876 ORTHO05D005488 2.3e-39 165.6 112 76.8
CiPaw.04G175300 Carya illinoinensis HOM05D004876 ORTHO05D005488 2.9e-39 165.2 106 80.2
FvH4_7g26120 Fragaria vesca HOM05D004876 ORTHO05D005488 3.8e-39 164.9 112 76.8
FAN10G2920 Fragaria x ananassa HOM05D004876 ORTHO05D005488 3.8e-39 164.9 112 76.8
Lalb_Chr11g0067701 Lupinus albus HOM05D004876 ORTHO05D005488 5.0e-39 164.5 112 75.0
Psat5g069360 Pisum sativum HOM05D004876 ORTHO05D005488 5.0e-39 164.5 112 75.9
TAR636G2293 Trochodendron aralioides HOM05D004876 ORTHO05D005488 5.0e-39 164.5 112 75.9
Glyma.06G141500 Glycine max HOM05D004876 ORTHO05D005488 6.6e-39 164.1 108 76.9
Phvul.005G185900 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 6.6e-39 164.1 112 74.1
FAN12G2601 Fragaria x ananassa HOM05D004876 ORTHO05D005488 8.6e-39 163.7 112 75.9
THA.LOC104824370 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 1.9e-38 162.5 109 76.1
TWI09G0651 Tripterygium wilfordii HOM05D004876 ORTHO05D005488 1.9e-38 162.5 113 76.1
FAN06G0183 Fragaria x ananassa HOM05D004876 ORTHO05D005488 9.5e-38 160.2 107 78.5
VMungo1309G0380 Vigna mungo HOM05D004876 ORTHO05D005488 9.5e-38 160.2 108 75.0
ATR0733G227 Amborella trichopoda HOM05D004876 ORTHO05D005488 1.2e-37 159.8 112 71.4
TPR.G28952 Trifolium pratense HOM05D004876 ORTHO05D005488 1.2e-37 159.8 112 75.0
CANSAT64G1352 Cannabis sativa HOM05D004876 ORTHO05D005488 1.6e-37 159.5 112 72.3
CANSAT64G2122 Cannabis sativa HOM05D004876 ORTHO05D005488 1.6e-37 159.5 112 72.3
FAN17G0734 Fragaria x ananassa HOM05D004876 ORTHO05D005488 1.6e-37 159.5 112 74.1
FAN03G2458 Fragaria x ananassa HOM05D004876 ORTHO05D005488 2.8e-37 158.7 112 75.0
TPR.G13975 Trifolium pratense HOM05D004876 ORTHO05D005488 6.1e-37 157.5 112 74.1
ATR1127G178 Amborella trichopoda HOM05D004876 ORTHO05D005488 1.4e-36 156.4 112 71.4
PGR142G2846 Punica granatum HOM05D004876 ORTHO05D005488 3.0e-36 155.2 108 70.4
PSO170G6098 Papaver somniferum HOM05D004876 ORTHO05D005488 2.0e-35 152.5 112 72.3
FvH4_4g04970 Fragaria vesca HOM05D004876 ORTHO05D005488 2.6e-35 152.1 131 64.9
CDE07G1038 Ceratophyllum demersum HOM05D004876 ORTHO05D005488 7.5e-35 150.6 115 70.4
PSO675G4155 Papaver somniferum HOM05D004876 ORTHO05D005488 7.5e-35 150.6 112 70.5
Os03g0114200 Oryza sativa ssp. japonica HOM05D004876 ORTHO05D005488 9.8e-35 150.2 112 66.1
AUR62008150 Chenopodium quinoa HOM05D004876 ORTHO05D005488 1.3e-34 149.8 108 72.2
AUR62028732 Chenopodium quinoa HOM05D004876 ORTHO05D005488 1.3e-34 149.8 108 72.2
HPP92_015433 Vanilla planifolia HOM05D004876 ORTHO05D005488 2.2e-34 149.1 107 70.1
Dinv21858 Davidia involucrata HOM05D004876 ORTHO05D005488 6.3e-34 147.5 111 69.4
Thecc.10G185000 Theobroma cacao HOM05D004876 ORTHO05D005488 1.1e-33 146.7 108 70.4
Aqoxy2G01672 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 1.4e-33 146.4 112 66.1
TWI53G0120 Tripterygium wilfordii HOM05D004876 ORTHO05D005488 1.4e-33 146.4 108 70.4
Zm00001eb000910 Zea mays HOM05D004876 ORTHO05D005488 3.1e-33 145.2 112 66.1
Aqoxy6G02070 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 7.0e-33 144.1 112 65.2
AL4G34450 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 2.0e-32 142.5 112 66.1
AL4G38670 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 2.0e-32 142.5 112 66.1
CARHR135880 Cardamine hirsuta HOM05D004876 ORTHO05D005488 2.0e-32 142.5 112 66.1
Thhalv10017311m.g Eutrema salsugineum HOM05D004876 ORTHO05D005488 2.0e-32 142.5 112 65.2
Sp4g23100 Schrenkiella parvula HOM05D004876 ORTHO05D005488 2.0e-32 142.5 112 66.1
EL10Ac5g10661 Beta vulgaris HOM05D004876 ORTHO05D005488 2.7e-32 142.1 108 70.4
BcaB06g29175 Brassica carinata HOM05D004876 ORTHO05D005488 2.7e-32 142.1 112 65.2
A04p31160 Brassica napus HOM05D004876 ORTHO05D005488 2.7e-32 142.1 112 65.2
C04p68560 Brassica napus HOM05D004876 ORTHO05D005488 2.7e-32 142.1 112 65.2
AT2G40780 Arabidopsis thaliana HOM05D004876 ORTHO05D005488 3.5e-32 141.7 112 65.2
BolC4t28355H Brassica oleracea HOM05D004876 ORTHO05D005488 3.5e-32 141.7 112 65.2
BraA04t18571Z Brassica rapa HOM05D004876 ORTHO05D005488 3.5e-32 141.7 108 66.7
Manes.10G044800 Manihot esculenta HOM05D004876 ORTHO05D005488 3.5e-32 141.7 112 69.6
Carub.0004s2308 Capsella rubella HOM05D004876 ORTHO05D005488 4.5e-32 141.4 112 65.2
vmacro06902 Vaccinium macrocarpon HOM05D004876 ORTHO05D005488 5.9e-32 141.0 112 67.0
Migut.F01232 Erythranthe guttata HOM05D004876 ORTHO05D005488 2.9e-31 138.7 112 64.3
Aa31LG3G1350 Aethionema arabicum HOM05D004876 ORTHO05D005488 5.0e-31 137.9 112 64.3
GSVIVG01038577001 Vitis vinifera HOM05D004876 ORTHO05D005488 4.3e-30 134.8 112 64.3
Aqoxy5G02193 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 1.2e-29 133.3 99 64.6
arahy.Tifrunner.gnm1.ann1.58ULDB Arachis hypogaea HOM05D004876 ORTHO05D005488 1.2e-29 133.3 108 64.8
Gohir.D10G184200 Gossypium hirsutum HOM05D004876 ORTHO05D005488 3.6e-29 131.7 112 64.3
Gorai.011G206400 Gossypium raimondii HOM05D004876 ORTHO05D005488 3.6e-29 131.7 112 64.3
Haze_17370 Corylus avellana HOM05D004876 ORTHO05D005488 1.4e-28 129.8 112 63.4
Duzib106G1237 Durio zibethinus HOM05D004876 ORTHO05D005488 1.4e-28 129.8 108 65.7
Gohir.A10G177600 Gossypium hirsutum HOM05D004876 ORTHO05D005488 3.0e-28 128.6 112 62.5
COL.COLO4_19475 Corchorus olitorius HOM05D004876 ORTHO05D005488 4.0e-28 128.3 112 62.5
Ciclev10032334m.g Citrus clementina HOM05D004876 ORTHO05D005488 8.9e-28 127.1 112 61.6
Lj8A52T23 Lonicera japonica HOM05D004876 ORTHO05D005488 8.9e-28 127.1 111 57.7
THA.LOC104803220 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 8.9e-28 127.1 112 61.6
SEGI_18121 Sequoiadendron giganteum HOM05D004876 ORTHO05D005488 2.0e-27 125.9 108 56.5
Nn2g10267 Nelumbo nucifera HOM05D004876 ORTHO05D005488 7.5e-27 124.0 82 78.0
Eucgr.G03147 Eucalyptus grandis HOM05D004876 ORTHO05D005488 2.9e-26 122.1 108 59.3
Medtr3g093790 Medicago truncatula HOM05D004876 ORTHO05D005488 3.7e-26 121.7 112 59.8
Rhsim03G0153600 Rhododendron simsii HOM05D004876 ORTHO05D005488 3.7e-26 121.7 108 60.2
Dinv37250 Davidia involucrata HOM05D004876 ORTHO05D005488 4.9e-26 121.3 112 58.9
THA.LOC104808402 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 6.4e-26 120.9 71 81.7
BcaB01g03515 Brassica carinata HOM05D004876 ORTHO05D005488 8.3e-26 120.6 112 57.1
Lj6g0009237 Lotus japonicus HOM05D004876 ORTHO05D005488 1.1e-25 120.2 112 58.9
Sc10g0003050 Simmondsia chinensis HOM05D004876 ORTHO05D005488 1.1e-25 120.2 74 78.4
ECA247G1702 Erigeron canadensis HOM05D004876 ORTHO05D008274 1.4e-25 119.8 111 57.7
Sopen03g025590 Solanum pennellii HOM05D004876 ORTHO05D005488 1.4e-25 119.8 115 52.2
HanXRQChr14g0460541 Helianthus annuus HOM05D004876 ORTHO05D005488 2.4e-25 119.0 112 57.1
CSS0007534 Camellia sinensis var. sinensis HOM05D004876 ORTHO05D005488 3.2e-25 118.6 112 57.1
Migut.A00831 Erythranthe guttata HOM05D004876 ORTHO05D005488 3.2e-25 118.6 110 56.4
Lsat_1_v5_gn_5_104800 Lactuca sativa HOM05D004876 ORTHO05D005488 3.2e-25 118.6 111 57.7
Peaxi162Scf00073g02225 Petunia axillaris HOM05D004876 ORTHO05D005488 3.2e-25 118.6 112 54.5
Nitab4.5_0006356g0050 Nicotiana tabacum HOM05D004876 ORTHO05D005488 4.1e-25 118.2 112 54.5
Nitab4.5_0000171g0270 Nicotiana tabacum HOM05D004876 ORTHO05D005488 1.2e-24 116.7 112 54.5
Ca_29506_v3 Cicer arietinum L. HOM05D004876 ORTHO05D005488 1.6e-24 116.3 112 58.0
PGR142G0395 Punica granatum HOM05D004876 ORTHO05D005488 2.0e-24 115.9 112 53.6
unitig_736.g22953 Utricularia gibba HOM05D004876 ORTHO05D005488 3.5e-24 115.2 112 56.2
Ah.11g051130 Amaranthus hybridus HOM05D004876 ORTHO05D005488 6.0e-24 114.4 108 57.4
CAN.G1229.8 Capsicum annuum HOM05D004876 ORTHO05D005488 3.0e-23 112.1 112 52.7
SGA_v2.0_scaffold2G00887 Striga asiatica HOM05D004876 ORTHO05D005488 3.9e-23 111.7 110 54.5
Rhsim04G0113200 Rhododendron simsii HOM05D004876 ORTHO05D005488 5.0e-23 111.3 96 62.5
PGSC0003DMG400020604 Solanum tuberosum HOM05D004876 ORTHO05D005488 5.0e-23 111.3 108 51.9
PGSC0003DMG400011645 Solanum tuberosum HOM05D004876 ORTHO05D005488 1.9e-22 109.4 110 53.6
MSTRG.8381 Avicennia marina HOM05D004876 ORTHO05D005488 2.5e-22 109.0 108 55.6
Solyc05g052180.3 Solanum lycopersicum HOM05D004876 ORTHO05D005488 2.5e-22 109.0 110 53.6
Sopen05g030710 Solanum pennellii HOM05D004876 ORTHO05D005488 4.3e-22 108.2 110 52.7
BcaC02g12879 Brassica carinata HOM05D004876 ORTHO05D005488 5.6e-22 107.8 71 71.8
Ca_16858_v3 Cicer arietinum L. HOM05D004876 ORTHO05D005488 7.3e-22 107.5 129 51.2
BcaB05g22749 Brassica carinata HOM05D004876 ORTHO05D005488 1.6e-21 106.3 71 70.4
TPR.G24790 Trifolium pratense HOM05D004876 ORTHO05D005488 2.1e-21 105.9 78 71.8
Cc02_g05210 Coffea canephora HOM05D004876 ORTHO05D005488 2.8e-21 105.5 112 50.9
SalBow7G3110 Salvia bowleyana HOM05D004876 ORTHO05D005488 3.6e-21 105.1 112 50.9
Nitab4.5_0008902g0030 Nicotiana tabacum HOM05D004876 ORTHO05D005488 1.1e-20 103.6 106 50.9
Peaxi162Scf00167g01129 Petunia axillaris HOM05D004876 ORTHO05D005488 1.1e-20 103.6 81 61.7
Mapoly0014s0200 Marchantia polymorpha HOM05D004876 ORTHO05D005488 1.4e-20 103.2 112 49.1
Oeu006067.1 Olea europaea HOM05D004876 ORTHO05D005488 1.4e-20 103.2 108 49.1
Pp3c16_8280 Physcomitrium patens HOM05D004876 ORTHO05D005488 1.4e-20 103.2 108 48.1
Lsat_1_v5_gn_2_126741 Lactuca sativa HOM05D004876 ORTHO05D005488 3.4e-19 98.6 103 52.4
Actinidia13638 Actinidia chinensis HOM05D004876 ORTHO05D005488 6.0e-16 87.8 52 78.8
AagrBONN_evm.TU.Sc2ySwM_368.2679 Anthoceros agrestis HOM05D004876 ORTHO05D005488 1.5e-14 83.2 112 41.1
Nn1g06656 Nelumbo nucifera HOM05D004876 ORTHO05D005488 4.0e-12 75.1 61 68.9
HanXRQChr07g0204961 Helianthus annuus HOM05D004876 ORTHO05D005488 1.3e-10 70.1 47 68.1
Cre03.g155800 Chlamydomonas reinhardtii HOM05D004876 ORTHO05D005488 2.4e-09 65.9 81 39.5
AL4G14440 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 6.0e-08 61.2 64 50.0
C03p81600 Brassica napus HOM05D004876 ORTHO05D005488 1.1e-06 57.0 44 59.1
BolC3t20430H Brassica oleracea HOM05D004876 ORTHO05D005488 1.1e-06 57.0 44 59.1
MCO11G196 Micromonas commoda HOM05D004876 ORTHO05D005488 3.3e-06 55.5 112 30.4
C01p26050 Brassica napus HOM05D004876 ORTHO05D005488 5.6e-06 54.7 38 65.8
Zm00001eb290470 Zea mays HOM05D004876 ORTHO05D005488 5.6e-06 54.7 44 54.5


User provided reference genes

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