Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0064300 Salix brachista HOM05D005786 ORTHO05D006946 1.1e-184 649.8 327 100.0
Potri.019G055100 Populus trichocarpa HOM05D005786 ORTHO05D006946 1.7e-148 529.6 327 83.2
Thecc.05G189200 Theobroma cacao HOM05D005786 ORTHO05D006946 1.7e-108 396.7 340 63.8
Manes.13G003500 Manihot esculenta HOM05D005786 ORTHO05D006946 4.1e-107 392.1 325 63.7
Duzib235G1473 Durio zibethinus HOM05D005786 ORTHO05D006946 1.6e-106 390.2 330 63.9
Gohir.D03G060604 Gossypium hirsutum HOM05D005786 ORTHO05D006946 4.6e-106 388.7 330 63.9
Gohir.A02G112711 Gossypium hirsutum HOM05D005786 ORTHO05D006946 1.7e-105 386.7 330 63.6
Actinidia06794 Actinidia chinensis HOM05D005786 ORTHO05D006946 3.9e-105 385.6 330 62.4
Gorai.002G056000 Gossypium raimondii HOM05D005786 ORTHO05D006946 2.5e-104 382.9 333 63.4
MD04G1246900 Malus domestica HOM05D005786 ORTHO05D006946 2.8e-103 379.4 335 63.0
Ciclev10012322m.g Citrus clementina HOM05D005786 ORTHO05D006946 6.2e-103 378.3 338 63.3
TPR.G33911 Trifolium pratense HOM05D005786 ORTHO05D006946 1.1e-102 377.5 323 62.2
Prupe.6G363100 Prunus persica HOM05D005786 ORTHO05D006946 1.4e-102 377.1 334 62.3
Cfa006249 Carpinus fangiana HOM05D005786 ORTHO05D006946 2.0e-101 373.2 333 61.0
MD12G1263300 Malus domestica HOM05D005786 ORTHO05D006946 5.8e-101 371.7 338 61.8
Ca_08003_v3 Cicer arietinum L. HOM05D005786 ORTHO05D006946 7.5e-101 371.3 321 62.6
arahy.Tifrunner.gnm1.ann1.K5KE50 Arachis hypogaea HOM05D005786 ORTHO05D006946 9.9e-101 370.9 331 61.9
TAR633G0414 Trochodendron aralioides HOM05D005786 ORTHO05D006946 9.9e-101 370.9 334 62.3
arahy.Tifrunner.gnm1.ann1.BC747V Arachis hypogaea HOM05D005786 ORTHO05D006946 2.2e-100 369.8 331 61.3
Dinv29083 Davidia involucrata HOM05D005786 ORTHO05D006946 3.7e-100 369.0 336 62.5
CANSAT54G1960 Cannabis sativa HOM05D005786 ORTHO05D006946 3.2e-99 365.9 331 61.9
CSS0002276 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 5.4e-99 365.2 331 61.3
TWI18G0853 Tripterygium wilfordii HOM05D005786 ORTHO05D006946 1.2e-98 364.0 336 60.1
GSVIVG01019061001 Vitis vinifera HOM05D005786 ORTHO05D006946 1.2e-98 364.0 340 59.4
PGR031G0068 Punica granatum HOM05D005786 ORTHO05D006946 3.5e-98 362.5 312 62.8
Medtr7g080350 Medicago truncatula HOM05D005786 ORTHO05D006946 4.6e-98 362.1 325 60.3
CiPaw.07G082100 Carya illinoinensis HOM05D005786 ORTHO05D006946 1.3e-97 360.5 332 59.9
Lalb_Chr03g0038061 Lupinus albus HOM05D005786 ORTHO05D006946 1.3e-97 360.5 337 59.9
Lj1g0012134 Lotus japonicus HOM05D005786 ORTHO05D006946 3.0e-97 359.4 322 61.2
Sc16g0010480 Simmondsia chinensis HOM05D005786 ORTHO05D006946 3.0e-97 359.4 336 58.0
Oeu034777.1 Olea europaea HOM05D005786 ORTHO05D006946 3.9e-97 359.0 334 60.5
Phvul.008G052600 Phaseolus vulgaris HOM05D005786 ORTHO05D006946 6.6e-97 358.2 328 58.8
Nn7g37593 Nelumbo nucifera HOM05D005786 ORTHO05D006946 8.6e-97 357.8 333 60.7
THA.LOC104805701 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 1.5e-96 357.1 319 61.1
FvH4_6g00240 Fragaria vesca HOM05D005786 ORTHO05D006946 3.3e-96 355.9 334 59.0
RcHm_v2.0_Chr3g0447611 Rosa chinensis HOM05D005786 ORTHO05D006946 3.3e-96 355.9 336 60.1
Migut.F01861 Erythranthe guttata HOM05D005786 ORTHO05D006946 4.3e-96 355.5 328 59.5
THA.LOC104823809 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 1.6e-95 353.6 315 60.0
BcaB06g27020 Brassica carinata HOM05D005786 ORTHO05D006946 3.6e-95 352.4 330 59.7
Dinv15702 Davidia involucrata HOM05D005786 ORTHO05D006946 3.6e-95 352.4 342 59.1
C04p43640 Brassica napus HOM05D005786 ORTHO05D006946 6.2e-95 351.7 330 59.7
PSO832G0344 Papaver somniferum HOM05D005786 ORTHO05D006946 6.2e-95 351.7 328 60.1
BcaC02g09515 Brassica carinata HOM05D005786 ORTHO05D006946 1.1e-94 350.9 330 59.4
PSO210G0333 Papaver somniferum HOM05D005786 ORTHO05D006946 1.4e-94 350.5 328 60.1
Sp7g05900 Schrenkiella parvula HOM05D005786 ORTHO05D006946 1.4e-94 350.5 331 57.4
Atru.chr12.1725 Acer truncatum HOM05D005786 ORTHO05D006946 1.8e-94 350.1 307 61.2
VMungo1383G2134 Vigna mungo HOM05D005786 ORTHO05D006946 1.8e-94 350.1 329 57.8
BraA04t16680Z Brassica rapa HOM05D005786 ORTHO05D006946 5.2e-94 348.6 325 59.7
MSTRG.335 Avicennia marina HOM05D005786 ORTHO05D006946 6.8e-94 348.2 318 58.8
CAN.G37.2 Capsicum annuum HOM05D005786 ORTHO05D006946 8.9e-94 347.8 333 59.5
A04p10160 Brassica napus HOM05D005786 ORTHO05D006946 2.0e-93 346.7 330 58.8
Carub.0002s1084 Capsella rubella HOM05D005786 ORTHO05D006946 9.9e-93 344.4 345 57.1
AL2G20300 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 2.2e-92 343.2 330 58.2
AT1G65270 Arabidopsis thaliana HOM05D005786 ORTHO05D006946 2.9e-92 342.8 330 58.2
Lj1A579T43 Lonicera japonica HOM05D005786 ORTHO05D006946 3.8e-92 342.4 386 50.8
BcaB05g24100 Brassica carinata HOM05D005786 ORTHO05D006946 4.9e-92 342.0 311 59.8
Aqoxy5G04319 Aquilegia oxysepala HOM05D005786 ORTHO05D006946 6.4e-92 341.7 328 58.5
Thhalv10004459m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 1.1e-91 340.9 335 56.7
BraA02t06369Z Brassica rapa HOM05D005786 ORTHO05D006946 1.4e-91 340.5 300 58.3
A02p13150 Brassica napus HOM05D005786 ORTHO05D006946 1.9e-91 340.1 300 59.7
CARHR056920 Cardamine hirsuta HOM05D005786 ORTHO05D006946 3.2e-91 339.3 320 57.5
Glyma.18G244000 Glycine max HOM05D005786 ORTHO05D006946 1.6e-90 337.0 305 58.7
Sed0025282 Sechium edule HOM05D005786 ORTHO05D006946 1.6e-90 337.0 325 58.5
Sopen04g017810 Solanum pennellii HOM05D005786 ORTHO05D006946 2.7e-90 336.3 314 60.5
Cc09_g03910 Coffea canephora HOM05D005786 ORTHO05D006946 3.5e-90 335.9 332 56.9
Aa31LG2G2390 Aethionema arabicum HOM05D005786 ORTHO05D006946 4.6e-90 335.5 332 57.5
Nitab4.5_0003825g0070 Nicotiana tabacum HOM05D005786 ORTHO05D006946 1.3e-89 334.0 320 58.1
Thhalv10018947m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 1.7e-89 333.6 314 57.6
FAN05G2398 Fragaria x ananassa HOM05D005786 ORTHO05D006946 1.7e-89 333.6 353 55.2
HanXRQChr04g0101081 Helianthus annuus HOM05D005786 ORTHO05D006946 2.3e-89 333.2 334 57.5
C02p21270 Brassica napus HOM05D005786 ORTHO05D006946 4.3e-88 328.9 304 57.2
Glyma.09G248700 Glycine max HOM05D005786 ORTHO05D006946 7.3e-88 328.2 305 56.7
Sp5g19940 Schrenkiella parvula HOM05D005786 ORTHO05D006946 7.3e-88 328.2 313 56.9
ECA232G2695 Erigeron canadensis HOM05D005786 ORTHO05D006946 2.1e-87 326.6 324 57.7
FAN09G1835 Fragaria x ananassa HOM05D005786 ORTHO05D006946 2.1e-87 326.6 353 54.1
CsaV3_1G044270 Cucumis sativus L. HOM05D005786 ORTHO05D006946 3.6e-87 325.9 329 55.9
HPP92_023718 Vanilla planifolia HOM05D005786 ORTHO05D006946 1.8e-86 323.6 330 55.2
MELO3C010021.2 Cucumis melo HOM05D005786 ORTHO05D006946 4.0e-86 322.4 329 55.6
MBI07_g02892_MAGBIO Magnolia biondii HOM05D005786 ORTHO05D006946 4.0e-86 322.4 286 58.7
SalBow6G2392 Salvia bowleyana HOM05D005786 ORTHO05D006946 4.0e-86 322.4 317 55.2
Hund07363 Selenicereus undatus HOM05D005786 ORTHO05D006946 6.9e-86 321.6 348 52.0
EL10Ac4g10004 Beta vulgaris HOM05D005786 ORTHO05D006946 9.9e-85 317.8 347 51.9
Lsat_1_v5_gn_0_14820 Lactuca sativa HOM05D005786 ORTHO05D006946 1.7e-84 317.0 346 54.9
AUR62006638 Chenopodium quinoa HOM05D005786 ORTHO05D006946 7.1e-83 311.6 338 53.0
DCAR_030004 Daucus carota HOM05D005786 ORTHO05D006946 1.2e-82 310.8 326 53.7
FAN14G0011 Fragaria x ananassa HOM05D005786 ORTHO05D006946 4.6e-82 308.9 361 51.0
ATR0743G231 Amborella trichopoda HOM05D005786 ORTHO05D006946 1.1e-80 304.3 331 52.3
CDE04G1735 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 7.3e-80 301.6 322 55.6
Peaxi162Scf01053g00210 Petunia axillaris HOM05D005786 ORTHO05D006946 9.0e-78 294.7 334 52.1
Nitab4.5_0000248g0060 Nicotiana tabacum HOM05D005786 ORTHO05D006946 1.2e-77 294.3 315 53.7
CDE07G0365 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 1.3e-76 290.8 330 53.0
SGA_v2.0_scaffold340G49308 Striga asiatica HOM05D005786 ORTHO05D006946 4.6e-74 282.3 333 52.6
Lsat_1_v5_gn_2_63981 Lactuca sativa HOM05D005786 ORTHO05D006946 1.3e-73 280.8 340 50.6
SEGI_32803 Sequoiadendron giganteum HOM05D005786 ORTHO05D006946 5.1e-73 278.9 334 48.8
Zm00001eb168750 Zea mays HOM05D005786 ORTHO05D006946 9.0e-70 268.1 323 48.6
Os11g0264600 Oryza sativa ssp. japonica HOM05D005786 ORTHO05D006946 1.7e-68 263.8 262 55.0
CSS0048270 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 2.9e-68 263.1 268 54.5
unitig_0.g385 Utricularia gibba HOM05D005786 ORTHO05D006946 1.5e-64 250.8 246 53.3
CARHR216460 Cardamine hirsuta HOM05D005786 ORTHO05D006946 1.9e-64 250.4 230 58.7
Actinidia03265 Actinidia chinensis HOM05D005786 ORTHO05D006946 1.3e-60 237.7 211 59.2
Psat3g102080 Pisum sativum HOM05D005786 ORTHO05D006946 3.5e-58 229.6 217 59.0
QL01p048186 Quercus lobata HOM05D005786 ORTHO05D006946 1.9e-51 207.2 122 79.5
Eucgr.H01412 Eucalyptus grandis HOM05D005786 ORTHO05D006946 2.3e-49 200.3 178 56.2
Haze_04584 Corylus avellana HOM05D005786 ORTHO05D006946 2.0e-48 197.2 125 78.4
Mapoly0069s0067 Marchantia polymorpha HOM05D005786 ORTHO05D006946 4.3e-48 196.1 322 39.8
Solyc04g047720.4 Solanum lycopersicum HOM05D005786 ORTHO05D006946 4.3e-48 196.1 216 53.7
SMO203G0033 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 4.8e-47 192.6 334 39.8
BcaC03g14691 Brassica carinata HOM05D005786 ORTHO05D006946 6.9e-46 188.7 226 46.5
vmacro19569 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 7.9e-42 175.3 208 51.4
Haze_04585 Corylus avellana HOM05D005786 ORTHO05D006946 2.0e-40 170.6 158 60.1
Cpa.g.sc123.39 Carica papaya HOM05D005786 ORTHO05D006946 1.7e-39 167.5 164 57.3
AagrBONN_evm.TU.Sc2ySwM_368.936 Anthoceros agrestis HOM05D005786 ORTHO05D006946 6.3e-39 165.6 328 34.5
Pp3c3_22280 Physcomitrium patens HOM05D005786 ORTHO05D006946 1.4e-38 164.5 338 35.5
SMO357G0021 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 7.7e-37 158.7 237 43.0
FAN02G1732 Fragaria x ananassa HOM05D005786 ORTHO05D006946 6.5e-36 155.6 161 55.3
vmacro19570 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 1.9e-35 154.1 104 76.0
CSS0025324 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 4.2e-35 152.9 145 58.6
Cpa.g.sc123.40 Carica papaya HOM05D005786 ORTHO05D006946 5.5e-35 152.5 104 75.0
AagrBONN_evm.TU.Sc2ySwM_117.2462 Anthoceros agrestis HOM05D005786 ORTHO05D006946 1.6e-34 151.0 322 33.2
ClCG03G010290 Citrullus lanatus HOM05D005786 ORTHO05D006946 8.8e-33 145.2 135 63.0
CSS0033529 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.6e-29 134.4 147 53.1
Medtr3g103380 Medicago truncatula HOM05D005786 ORTHO05D006946 2.6e-24 117.1 124 50.0
ClCG03G010310 Citrullus lanatus HOM05D005786 ORTHO05D006946 1.8e-22 110.9 115 55.7
AL2G20340 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 5.9e-21 105.9 84 66.7
Eucgr.H01411 Eucalyptus grandis HOM05D005786 ORTHO05D006946 2.5e-19 100.5 82 68.3
CARHR216470 Cardamine hirsuta HOM05D005786 ORTHO05D006946 5.5e-19 99.4 98 59.2
BcaB04g17978 Brassica carinata HOM05D005786 ORTHO05D006946 2.2e-15 87.4 87 52.9
Oeu040717.1 Olea europaea HOM05D005786 ORTHO05D006946 3.7e-15 86.7 102 57.8
CBR_g36458 Chara braunii HOM05D005786 ORTHO05D006946 5.4e-14 82.8 257 31.9
Ah.04g159110 Amaranthus hybridus HOM05D005786 ORTHO05D006946 3.8e-12 76.6 98 50.0
MCO14G575 Micromonas commoda HOM05D005786 ORTHO05D006946 2.8e-10 70.5 310 24.8
BolC2t08267H Brassica oleracea HOM05D005786 ORTHO05D006946 1.2e-08 65.1 87 48.3


User provided reference genes

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