Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0060300 Salix brachista HOM05D004639 ORTHO05D005201 3.8e-107 391.3 177 100.0
Sabra19G0060200 Salix brachista HOM05D004639 ORTHO05D005201 7.6e-47 191.0 89 100.0
Sabra19G0060700 Salix brachista HOM05D004639 ORTHO05D005201 7.6e-47 191.0 89 100.0
Sabra19G0060900 Salix brachista HOM05D004639 ORTHO05D005201 7.6e-47 191.0 89 100.0
Sabra19G0061000 Salix brachista HOM05D004639 ORTHO05D005201 7.6e-47 191.0 89 100.0
SabraUnG0000100 Salix brachista HOM05D004639 ORTHO05D005201 7.6e-47 191.0 89 100.0
SabraUnG0000200 Salix brachista HOM05D004639 ORTHO05D005201 7.6e-47 191.0 89 100.0
Potri.014G187300 Populus trichocarpa HOM05D004639 ORTHO05D005201 5.3e-40 168.3 89 87.6
Potri.014G189400 Populus trichocarpa HOM05D004639 ORTHO05D005201 5.3e-40 168.3 89 87.6
Potri.014G187000 Populus trichocarpa HOM05D004639 ORTHO05D005201 9.0e-40 167.5 89 87.6
Potri.014G187766 Populus trichocarpa HOM05D004639 ORTHO05D005201 6.0e-28 128.3 89 70.8
DCAR_016067 Daucus carota HOM05D004639 ORTHO05D005201 1.6e-25 120.2 79 69.6
Oeu061992.1 Olea europaea HOM05D004639 ORTHO05D005201 1.8e-24 116.7 79 65.8
Sabra12G0026100 Salix brachista HOM05D004639 ORTHO05D005201 2.4e-24 116.3 79 64.6
Phvul.L000400 Phaseolus vulgaris HOM05D004639 ORTHO05D005201 1.5e-23 113.6 81 63.0
Potri.012G037700 Populus trichocarpa HOM05D004639 ORTHO05D005201 2.0e-23 113.2 79 63.3
Aqoxy4G01839 Aquilegia oxysepala HOM05D004639 ORTHO05D005201 3.4e-23 112.5 82 59.8
MD00G1164900 Malus domestica HOM05D004639 ORTHO05D005201 7.6e-23 111.3 81 64.2
QL01p053168 Quercus lobata HOM05D004639 ORTHO05D005201 7.6e-23 111.3 83 59.0
QL01p052883 Quercus lobata HOM05D011240 ORTHO05D005201 1.0e-22 110.9 83 59.0
C07p01740 Brassica napus HOM05D004639 ORTHO05D005201 1.3e-22 110.5 80 63.8
BolC7t40577H Brassica oleracea HOM05D004639 ORTHO05D005201 1.3e-22 110.5 80 63.8
Nitab4.5_0010824g0010 Nicotiana tabacum HOM05D004639 ORTHO05D005201 1.3e-22 110.5 81 59.3
QL01p053770 Quercus lobata HOM05D004639 ORTHO05D005201 1.7e-22 110.2 83 59.0
SalBow6G0181 Salvia bowleyana HOM05D004639 ORTHO05D005201 1.7e-22 110.2 96 56.2
SalBow6G5700 Salvia bowleyana HOM05D004639 ORTHO05D005201 1.7e-22 110.2 96 56.2
Ciclev10028470m.g Citrus clementina HOM05D004639 ORTHO05D005201 2.2e-22 109.8 79 64.6
Glyma.13G009500 Glycine max HOM05D004639 ORTHO05D005201 2.2e-22 109.8 79 63.3
Hma1.2p1_1077F.1_g254710 Hydrangea macrophylla HOM05D004639 ORTHO05D005201 2.2e-22 109.8 80 62.5
Cpa.g.sc15.68 Carica papaya HOM05D004639 ORTHO05D005201 2.9e-22 109.4 79 62.0
MBI03_g13041_MAGBIO Magnolia biondii HOM05D004639 ORTHO05D005201 2.9e-22 109.4 90 57.8
Nn5g27169 Nelumbo nucifera HOM05D004639 ORTHO05D005201 2.9e-22 109.4 101 53.5
arahy.Tifrunner.gnm1.ann1.CP937L Arachis hypogaea HOM05D004639 ORTHO05D005201 3.8e-22 109.0 81 58.0
arahy.Tifrunner.gnm1.ann1.GWL1KB Arachis hypogaea HOM05D004639 ORTHO05D005201 3.8e-22 109.0 81 58.0
Dinv01634 Davidia involucrata HOM05D004639 ORTHO05D005201 3.8e-22 109.0 78 62.8
Dinv08242 Davidia involucrata HOM05D004639 ORTHO05D005201 3.8e-22 109.0 78 62.8
Sopen02g005400 Solanum pennellii HOM05D004639 ORTHO05D005201 3.8e-22 109.0 82 61.0
Actinidia23035 Actinidia chinensis HOM05D004639 ORTHO05D005201 4.9e-22 108.6 80 60.0
AL3G19300 Arabidopsis lyrata HOM05D004639 ORTHO05D005201 4.9e-22 108.6 80 61.2
BraA07t27872Z Brassica rapa HOM05D004639 ORTHO05D005201 6.5e-22 108.2 80 62.5
Solyc02g021100.3 Solanum lycopersicum HOM05D004639 ORTHO05D005201 6.5e-22 108.2 82 61.0
TAR376G0371 Trochodendron aralioides HOM05D004639 ORTHO05D005201 6.5e-22 108.2 79 62.0
Carub.0003s0750 Capsella rubella HOM05D004639 ORTHO05D005201 8.4e-22 107.8 80 61.2
Migut.A01100 Erythranthe guttata HOM05D004639 ORTHO05D005201 8.4e-22 107.8 79 62.0
Lj2g0020909 Lotus japonicus HOM05D004639 ORTHO05D005201 8.4e-22 107.8 80 60.0
Manes.18G143900 Manihot esculenta HOM05D004639 ORTHO05D005201 1.1e-21 107.5 81 60.5
Peaxi162Scf00331g00311 Petunia axillaris HOM05D004639 ORTHO05D005201 1.1e-21 107.5 84 56.0
Sp3g06840 Schrenkiella parvula HOM05D004639 ORTHO05D005201 1.1e-21 107.5 81 61.7
Aa31LG5G18470 Aethionema arabicum HOM05D004639 ORTHO05D005201 1.4e-21 107.1 80 60.0
CAN.G989.2 Capsicum annuum HOM05D004639 ORTHO05D005201 1.4e-21 107.1 84 57.1
RcHm_v2.0_Chr3g0497491 Rosa chinensis HOM05D004639 ORTHO05D005201 1.4e-21 107.1 79 64.6
THA.LOC104805811 Tarenaya hassleriana HOM05D004639 ORTHO05D005201 1.4e-21 107.1 79 60.8
A07p00740 Brassica napus HOM05D004639 ORTHO05D005201 1.9e-21 106.7 80 61.2
CARHR082670 Cardamine hirsuta HOM05D004639 ORTHO05D005201 1.9e-21 106.7 80 60.0
Cc00_g06760 Coffea canephora HOM05D004639 ORTHO05D005201 2.5e-21 106.3 80 57.5
Prupe.4G286600 Prunus persica HOM05D004639 ORTHO05D005201 2.5e-21 106.3 79 60.8
Rhsim11G0007200 Rhododendron simsii HOM05D004639 ORTHO05D005201 2.5e-21 106.3 79 60.8
CANSAT64G1383 Cannabis sativa HOM05D004639 ORTHO05D005201 3.2e-21 105.9 140 43.6
CANSAT64G2443 Cannabis sativa HOM05D004639 ORTHO05D005201 3.2e-21 105.9 140 43.6
Atru.chr9.65 Acer truncatum HOM05D004639 ORTHO05D005201 4.2e-21 105.5 83 54.2
ATR0068G005 Amborella trichopoda HOM05D004639 ORTHO05D005201 4.2e-21 105.5 80 58.8
BcaB04g16901 Brassica carinata HOM05D004639 ORTHO05D005201 4.2e-21 105.5 80 61.2
AUR62017756 Chenopodium quinoa HOM05D004639 ORTHO05D005201 4.2e-21 105.5 76 59.2
Thhalv10020704m.g Eutrema salsugineum HOM05D004639 ORTHO05D005201 5.5e-21 105.1 80 61.2
Gohir.A09G007300 Gossypium hirsutum HOM05D004639 ORTHO05D005201 5.5e-21 105.1 79 62.0
Gorai.006G008100 Gossypium raimondii HOM05D004639 ORTHO05D005201 7.1e-21 104.8 79 62.0
Nitab4.5_0001799g0030 Nicotiana tabacum HOM05D004639 ORTHO05D005201 7.1e-21 104.8 81 58.0
TPR.G9531 Trifolium pratense HOM05D004639 ORTHO05D005201 7.1e-21 104.8 79 58.2
TWI31G0951 Tripterygium wilfordii HOM05D004639 ORTHO05D005201 7.1e-21 104.8 80 58.8
HPP92_007024 Vanilla planifolia HOM05D004639 ORTHO05D005201 7.1e-21 104.8 78 59.0
HPP92_015991 Vanilla planifolia HOM05D004639 ORTHO05D005201 7.1e-21 104.8 118 46.6
VMungo0540G1855 Vigna mungo HOM05D004639 ORTHO05D005201 7.1e-21 104.8 79 59.5
Gohir.D09G006600 Gossypium hirsutum HOM05D004639 ORTHO05D005201 9.3e-21 104.4 79 62.0
CBR_g51322 Chara braunii HOM05D004639 ORTHO05D005201 1.2e-20 104.0 118 46.6
ClCG08G005050 Citrullus lanatus HOM05D004639 ORTHO05D005201 1.2e-20 104.0 78 56.4
HanXRQChr12g0386021 Helianthus annuus HOM05D004639 ORTHO05D005201 2.1e-20 103.2 87 51.7
Thecc.04G056700 Theobroma cacao HOM05D004639 ORTHO05D005201 2.1e-20 103.2 79 62.0
MSTRG.8994 Avicennia marina HOM05D004639 ORTHO05D005201 2.7e-20 102.8 80 58.8
TWI15G1026 Tripterygium wilfordii HOM05D004639 ORTHO05D005201 4.6e-20 102.1 80 56.2
CANSAT64G2852 Cannabis sativa HOM05D004639 ORTHO05D005201 6.0e-20 101.7 79 58.2
CsaV3_5G037160 Cucumis sativus L. HOM05D004639 ORTHO05D005201 6.0e-20 101.7 80 55.0
Lsat_1_v5_gn_3_140620 Lactuca sativa HOM05D004639 ORTHO05D005201 6.0e-20 101.7 76 57.9
PSO384G4518 Papaver somniferum HOM05D004639 ORTHO05D005201 6.0e-20 101.7 78 57.7
PSO493G0020 Papaver somniferum HOM05D004639 ORTHO05D005201 6.0e-20 101.7 78 57.7
vmacro22429 Vaccinium macrocarpon HOM05D004639 ORTHO05D005201 6.0e-20 101.7 81 60.5
SGA_v2.0_scaffold291G47333 Striga asiatica HOM05D004639 ORTHO05D005201 7.9e-20 101.3 78 57.7
EL10As7g23724 Beta vulgaris HOM05D004639 ORTHO05D005201 1.8e-19 100.1 77 57.1
FvH4_1g27870 Fragaria vesca HOM05D004639 ORTHO05D005201 1.8e-19 100.1 79 59.5
FAN26G1776 Fragaria x ananassa HOM05D004639 ORTHO05D005201 1.8e-19 100.1 79 59.5
Medtr0037s0060 Medicago truncatula HOM05D004639 ORTHO05D005201 1.8e-19 100.1 97 49.5
Medtr0037s0250 Medicago truncatula HOM05D004639 ORTHO05D005201 1.8e-19 100.1 80 53.8
PGR031G3121 Punica granatum HOM05D004639 ORTHO05D005201 1.8e-19 100.1 83 54.2
FAN19G3130 Fragaria x ananassa HOM05D004639 ORTHO05D005201 2.3e-19 99.8 79 59.5
vmacro04281 Vaccinium macrocarpon HOM05D004639 ORTHO05D005201 2.3e-19 99.8 79 60.8
MELO3C022885.2 Cucumis melo HOM05D004639 ORTHO05D005201 3.0e-19 99.4 80 53.8
HanXRQChr16g0532761 Helianthus annuus HOM05D004639 ORTHO05D005201 5.1e-19 98.6 87 49.4
ECA234G0087 Erigeron canadensis HOM05D004639 ORTHO05D005201 1.1e-18 97.4 72 59.7
ECA234G3785 Erigeron canadensis HOM05D004639 ORTHO05D005201 1.5e-18 97.1 79 51.9
Lj2g0022882 Lotus japonicus HOM05D004639 ORTHO05D005201 1.5e-18 97.1 79 57.0
SEGI_27362 Sequoiadendron giganteum HOM05D004639 ORTHO05D005201 1.5e-18 97.1 85 54.1
GSVIVG01003641001 Vitis vinifera HOM05D004639 ORTHO05D005201 1.5e-18 97.1 89 51.7
Ah.05g167280 Amaranthus hybridus HOM05D001485 ORTHO05D001407 1.9e-18 96.7 73 57.5
BcaC08g44553 Brassica carinata HOM05D004639 ORTHO05D005201 1.9e-18 96.7 106 48.1
Lj2g0018447 Lotus japonicus HOM05D004639 ORTHO05D005201 7.4e-18 94.7 83 48.2
Eucgr.B01580 Eucalyptus grandis HOM05D004639 ORTHO05D005201 1.3e-17 94.0 82 56.1
Gohir.D02G140450 Gossypium hirsutum HOM05D004639 ORTHO05D005201 1.6e-17 93.6 92 52.2
SHI25031 Sapria himalayana HOM05D004639 ORTHO05D005201 2.8e-17 92.8 73 56.2
QL93p0107_0438 Quercus lobata HOM05D004639 ORTHO05D005201 4.8e-17 92.0 59 66.1
HPP92_007076 Vanilla planifolia HOM05D004639 ORTHO05D005201 6.2e-17 91.7 65 64.6
Mapoly0049s0024 Marchantia polymorpha HOM05D004639 ORTHO05D005201 8.2e-17 91.3 73 54.8
Lalb_Chr00c23g0406301 Lupinus albus HOM05D004639 ORTHO05D005201 1.1e-16 90.9 78 53.8
Lalb_Chr00c55g0413711 Lupinus albus HOM05D004639 ORTHO05D005201 1.1e-16 90.9 78 53.8
Lalb_Chr18g0049251 Lupinus albus HOM05D004639 ORTHO05D005201 1.1e-16 90.9 78 53.8
Pp3c15_4380 Physcomitrium patens HOM05D004639 ORTHO05D005201 4.1e-16 89.0 89 48.3
Gorai.005G156200 Gossypium raimondii HOM05D004639 ORTHO05D005201 6.9e-16 88.2 92 50.0
C06p20180 Brassica napus HOM05D004639 ORTHO05D005201 3.4e-15 85.9 45 80.0
BolC6t37199H Brassica oleracea HOM05D004639 ORTHO05D005201 3.4e-15 85.9 45 80.0
Zm00001eb264110 Zea mays HOM05D004639 ORTHO05D005201 1.7e-14 83.6 85 45.9
Os09g0101100 Oryza sativa ssp. japonica HOM05D004639 ORTHO05D005201 2.2e-14 83.2 73 47.9
AUR62032895 Chenopodium quinoa HOM05D004639 ORTHO05D005201 7.2e-13 78.2 57 61.4
CDE02G2478 Ceratophyllum demersum HOM05D004639 ORTHO05D005201 9.3e-13 77.8 90 45.6
CiPaw.15G093500 Carya illinoinensis HOM05D004639 ORTHO05D005201 1.6e-12 77.0 65 53.8
CSS0047186 Camellia sinensis var. sinensis HOM05D004639 ORTHO05D005201 6.1e-12 75.1 70 48.6
SMO334G0025 Selaginella moellendorffii HOM05D004639 ORTHO05D005201 7.9e-12 74.7 72 47.2
Hund25534 Selenicereus undatus HOM05D004639 ORTHO05D005201 8.7e-11 71.2 56 55.4
PRCOL_00006916 Prasinoderma coloniale HOM05D004639 ORTHO05D005201 1.1e-10 70.9 73 45.2
unitig_22.g6365 Utricularia gibba HOM05D004639 ORTHO05D005201 6.9e-08 61.6 32 75.0
Cre05.g234250 Chlamydomonas reinhardtii HOM05D004639 ORTHO05D005201 2.6e-07 59.7 75 38.7
unitig_22.g6364 Utricularia gibba HOM05D004639 ORTHO05D005201 7.7e-07 58.2 67 46.3
HPP92_015994 Vanilla planifolia HOM05D004639 ORTHO05D005201 2.2e-06 56.6 32 68.8
SHI28181 Sapria himalayana HOM05D000002 ORTHO05D000047 8.5e-06 54.7 34 64.7


User provided reference genes

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