Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0060200 Salix brachista HOM05D004639 ORTHO05D005201 7.2e-133 477.2 241 100.0
Sabra19G0061000 Salix brachista HOM05D004639 ORTHO05D005201 8.8e-123 443.7 252 91.7
Sabra19G0060900 Salix brachista HOM05D004639 ORTHO05D005201 9.8e-122 440.3 252 91.7
SabraUnG0000200 Salix brachista HOM05D004639 ORTHO05D005201 1.2e-119 433.3 235 92.3
SabraUnG0000100 Salix brachista HOM05D004639 ORTHO05D005201 3.5e-119 431.8 235 91.9
Potri.014G189400 Populus trichocarpa HOM05D004639 ORTHO05D005201 1.9e-96 356.3 253 78.7
Potri.014G187000 Populus trichocarpa HOM05D004639 ORTHO05D005201 7.3e-93 344.4 253 75.5
Potri.014G187300 Populus trichocarpa HOM05D004639 ORTHO05D005201 2.1e-92 342.8 253 75.1
Sabra19G0060700 Salix brachista HOM05D004639 ORTHO05D005201 6.6e-78 294.7 159 89.3
Sabra19G0060600 Salix brachista HOM05D004639 ORTHO05D005201 7.3e-69 264.6 167 87.4
Potri.014G187766 Populus trichocarpa HOM05D004639 ORTHO05D005201 6.2e-68 261.5 236 63.1
Sabra19G0060300 Salix brachista HOM05D004639 ORTHO05D005201 1.3e-46 190.7 89 100.0
MD00G1164900 Malus domestica HOM05D004639 ORTHO05D005201 1.5e-45 187.2 170 55.9
DCAR_016067 Daucus carota HOM05D004639 ORTHO05D005201 1.6e-44 183.7 211 48.3
Carub.0003s0750 Capsella rubella HOM05D004639 ORTHO05D005201 6.3e-44 181.8 171 52.6
Aqoxy4G01839 Aquilegia oxysepala HOM05D004639 ORTHO05D005201 1.4e-43 180.6 192 49.5
C07p01740 Brassica napus HOM05D004639 ORTHO05D005201 4.1e-43 179.1 173 52.6
BolC7t40577H Brassica oleracea HOM05D004639 ORTHO05D005201 4.1e-43 179.1 173 52.6
RcHm_v2.0_Chr3g0497491 Rosa chinensis HOM05D004639 ORTHO05D005201 9.0e-43 177.9 165 55.2
Ciclev10028470m.g Citrus clementina HOM05D004639 ORTHO05D005201 1.2e-42 177.6 155 57.4
Prupe.4G286600 Prunus persica HOM05D004639 ORTHO05D005201 2.0e-42 176.8 168 53.0
Lsat_1_v5_gn_3_140620 Lactuca sativa HOM05D004639 ORTHO05D005201 2.6e-42 176.4 162 52.5
Thhalv10020704m.g Eutrema salsugineum HOM05D004639 ORTHO05D005201 4.5e-42 175.6 173 51.4
Sp3g06840 Schrenkiella parvula HOM05D004639 ORTHO05D005201 4.5e-42 175.6 171 52.0
Thecc.04G056700 Theobroma cacao HOM05D004639 ORTHO05D005201 4.5e-42 175.6 163 56.4
AL3G19300 Arabidopsis lyrata HOM05D004639 ORTHO05D005201 7.6e-42 174.9 171 50.9
CAN.G989.2 Capsicum annuum HOM05D004639 ORTHO05D005201 7.6e-42 174.9 178 51.7
Oeu061992.1 Olea europaea HOM05D004639 ORTHO05D005201 7.6e-42 174.9 171 52.0
Aa31LG5G18470 Aethionema arabicum HOM05D004639 ORTHO05D005201 1.0e-41 174.5 177 49.2
Nitab4.5_0010824g0010 Nicotiana tabacum HOM05D004639 ORTHO05D005201 1.3e-41 174.1 165 53.9
BraA07t27872Z Brassica rapa HOM05D004639 ORTHO05D005201 2.2e-41 173.3 173 51.4
A07p00740 Brassica napus HOM05D004639 ORTHO05D005201 2.9e-41 172.9 173 50.9
Rhsim11G0007200 Rhododendron simsii HOM05D004639 ORTHO05D005201 2.9e-41 172.9 176 54.5
Sopen02g005400 Solanum pennellii HOM05D004639 ORTHO05D005201 5.0e-41 172.2 172 50.0
Gohir.A09G007300 Gossypium hirsutum HOM05D004639 ORTHO05D005201 6.5e-41 171.8 155 55.5
Gorai.006G008100 Gossypium raimondii HOM05D004639 ORTHO05D005201 8.5e-41 171.4 155 55.5
Solyc02g021100.3 Solanum lycopersicum HOM05D004639 ORTHO05D005201 8.5e-41 171.4 172 50.0
Gohir.D09G006600 Gossypium hirsutum HOM05D004639 ORTHO05D005201 1.1e-40 171.0 155 55.5
BcaB04g16901 Brassica carinata HOM05D004639 ORTHO05D005201 1.4e-40 170.6 173 50.3
Migut.A01100 Erythranthe guttata HOM05D004639 ORTHO05D005201 1.4e-40 170.6 165 54.5
Dinv01634 Davidia involucrata HOM05D004639 ORTHO05D005201 1.9e-40 170.2 216 45.4
Actinidia23035 Actinidia chinensis HOM05D004639 ORTHO05D005201 3.2e-40 169.5 156 52.6
arahy.Tifrunner.gnm1.ann1.CP937L Arachis hypogaea HOM05D004639 ORTHO05D005201 3.2e-40 169.5 172 47.7
arahy.Tifrunner.gnm1.ann1.GWL1KB Arachis hypogaea HOM05D004639 ORTHO05D005201 3.2e-40 169.5 172 47.7
Manes.18G143900 Manihot esculenta HOM05D004639 ORTHO05D005201 3.2e-40 169.5 165 52.1
Cpa.g.sc15.68 Carica papaya HOM05D004639 ORTHO05D005201 4.2e-40 169.1 171 50.9
Lj2g0020909 Lotus japonicus HOM05D004639 ORTHO05D005201 4.2e-40 169.1 175 48.0
Peaxi162Scf00331g00311 Petunia axillaris HOM05D004639 ORTHO05D005201 4.2e-40 169.1 160 52.5
QL01p053168 Quercus lobata HOM05D004639 ORTHO05D005201 4.2e-40 169.1 202 45.0
THA.LOC104805811 Tarenaya hassleriana HOM05D004639 ORTHO05D005201 5.5e-40 168.7 232 41.8
MBI03_g13041_MAGBIO Magnolia biondii HOM05D004639 ORTHO05D005201 1.2e-39 167.5 188 50.0
Nitab4.5_0001799g0030 Nicotiana tabacum HOM05D004639 ORTHO05D005201 1.2e-39 167.5 185 48.6
ATR0068G005 Amborella trichopoda HOM05D004639 ORTHO05D005201 1.6e-39 167.2 178 48.3
FvH4_1g27870 Fragaria vesca HOM05D004639 ORTHO05D005201 1.6e-39 167.2 169 49.1
FAN26G1776 Fragaria x ananassa HOM05D004639 ORTHO05D005201 1.6e-39 167.2 169 49.1
SGA_v2.0_scaffold291G47333 Striga asiatica HOM05D004639 ORTHO05D005201 1.6e-39 167.2 158 51.9
Atru.chr9.65 Acer truncatum HOM05D004639 ORTHO05D005201 2.1e-39 166.8 169 50.3
FAN19G3130 Fragaria x ananassa HOM05D004639 ORTHO05D005201 2.1e-39 166.8 169 49.1
Phvul.L000400 Phaseolus vulgaris HOM05D004639 ORTHO05D005201 2.1e-39 166.8 185 47.0
Cc00_g06760 Coffea canephora HOM05D004639 ORTHO05D005201 1.8e-38 163.7 168 48.2
PSO384G4518 Papaver somniferum HOM05D004639 ORTHO05D005201 1.8e-38 163.7 178 48.9
PSO493G0020 Papaver somniferum HOM05D004639 ORTHO05D005201 1.8e-38 163.7 178 48.9
ECA234G0087 Erigeron canadensis HOM05D004639 ORTHO05D005201 3.9e-38 162.5 155 50.3
QL01p053770 Quercus lobata HOM05D004639 ORTHO05D005201 3.9e-38 162.5 202 44.1
SalBow6G0181 Salvia bowleyana HOM05D004639 ORTHO05D005201 8.7e-38 161.4 179 46.9
SalBow6G5700 Salvia bowleyana HOM05D004639 ORTHO05D005201 8.7e-38 161.4 179 46.9
ECA234G3785 Erigeron canadensis HOM05D004639 ORTHO05D005201 1.1e-37 161.0 204 43.6
VMungo0540G1855 Vigna mungo HOM05D004639 ORTHO05D005201 1.1e-37 161.0 174 46.0
AUR62017756 Chenopodium quinoa HOM05D004639 ORTHO05D005201 1.5e-37 160.6 180 47.2
Glyma.13G009500 Glycine max HOM05D004639 ORTHO05D005201 1.9e-37 160.2 169 47.9
HanXRQChr12g0386021 Helianthus annuus HOM05D004639 ORTHO05D005201 9.7e-37 157.9 151 47.7
TWI15G1026 Tripterygium wilfordii HOM05D004639 ORTHO05D005201 9.7e-37 157.9 160 49.4
TWI31G0951 Tripterygium wilfordii HOM05D004639 ORTHO05D005201 1.3e-36 157.5 160 50.0
MSTRG.8994 Avicennia marina HOM05D004639 ORTHO05D005201 1.6e-36 157.1 165 49.7
vmacro22429 Vaccinium macrocarpon HOM05D004639 ORTHO05D005201 1.6e-36 157.1 160 51.2
Hma1.2p1_1077F.1_g254710 Hydrangea macrophylla HOM05D004639 ORTHO05D005201 2.2e-36 156.8 170 47.6
Medtr0037s0250 Medicago truncatula HOM05D004639 ORTHO05D005201 2.2e-36 156.8 178 46.1
GSVIVG01003641001 Vitis vinifera HOM05D004639 ORTHO05D005201 2.2e-36 156.8 150 50.0
vmacro04281 Vaccinium macrocarpon HOM05D004639 ORTHO05D005201 3.7e-36 156.0 159 51.6
HPP92_007024 Vanilla planifolia HOM05D004639 ORTHO05D005201 4.8e-36 155.6 151 53.0
TAR376G0371 Trochodendron aralioides HOM05D004639 ORTHO05D005201 6.3e-36 155.2 155 51.0
Sabra12G0026100 Salix brachista HOM05D004639 ORTHO05D005201 8.2e-36 154.8 148 51.4
SEGI_27362 Sequoiadendron giganteum HOM05D004639 ORTHO05D005201 1.8e-35 153.7 152 50.7
CANSAT64G1383 Cannabis sativa HOM05D004639 ORTHO05D005201 2.4e-35 153.3 154 49.4
CANSAT64G2443 Cannabis sativa HOM05D004639 ORTHO05D005201 2.4e-35 153.3 154 49.4
HanXRQChr16g0532761 Helianthus annuus HOM05D004639 ORTHO05D005201 2.4e-35 153.3 151 46.4
Lj2g0022882 Lotus japonicus HOM05D004639 ORTHO05D005201 5.3e-35 152.1 170 46.5
CANSAT64G2852 Cannabis sativa HOM05D004639 ORTHO05D005201 6.9e-35 151.8 155 49.0
Medtr0037s0060 Medicago truncatula HOM05D004639 ORTHO05D005201 1.5e-34 150.6 179 44.7
Potri.012G037700 Populus trichocarpa HOM05D004639 ORTHO05D005201 2.0e-34 150.2 148 50.7
Ah.05g167280 Amaranthus hybridus HOM05D001485 ORTHO05D001407 3.4e-34 149.4 172 44.8
EL10As7g23724 Beta vulgaris HOM05D004639 ORTHO05D005201 1.3e-33 147.5 203 40.9
CsaV3_5G037160 Cucumis sativus L. HOM05D004639 ORTHO05D005201 8.5e-33 144.8 181 43.6
HPP92_007076 Vanilla planifolia HOM05D004639 ORTHO05D005201 8.5e-33 144.8 144 54.2
MELO3C022885.2 Cucumis melo HOM05D004639 ORTHO05D005201 1.4e-32 144.1 181 43.1
Nn5g27169 Nelumbo nucifera HOM05D004639 ORTHO05D005201 4.2e-32 142.5 172 45.9
BcaC08g44553 Brassica carinata HOM05D004639 ORTHO05D005201 5.5e-32 142.1 177 46.9
PGR031G3121 Punica granatum HOM05D004639 ORTHO05D005201 7.2e-32 141.7 163 44.8
ClCG08G005050 Citrullus lanatus HOM05D004639 ORTHO05D005201 9.4e-32 141.4 181 42.0
Eucgr.B01580 Eucalyptus grandis HOM05D004639 ORTHO05D005201 2.7e-31 139.8 171 45.6
QL01p052883 Quercus lobata HOM05D011240 ORTHO05D005201 2.3e-30 136.7 116 55.2
SHI25031 Sapria himalayana HOM05D004639 ORTHO05D005201 2.3e-30 136.7 151 47.7
Lj2g0018447 Lotus japonicus HOM05D004639 ORTHO05D005201 1.5e-29 134.0 176 37.5
CARHR082670 Cardamine hirsuta HOM05D004639 ORTHO05D005201 2.0e-29 133.7 100 59.0
CiPaw.15G093500 Carya illinoinensis HOM05D004639 ORTHO05D005201 3.3e-29 132.9 154 48.7
Lalb_Chr00c23g0406301 Lupinus albus HOM05D004639 ORTHO05D005201 1.3e-28 131.0 155 45.2
Dinv08242 Davidia involucrata HOM05D004639 ORTHO05D005201 4.8e-28 129.0 94 61.7
Hund25534 Selenicereus undatus HOM05D004639 ORTHO05D005201 4.8e-28 129.0 154 44.2
Mapoly0049s0024 Marchantia polymorpha HOM05D004639 ORTHO05D005201 8.2e-28 128.3 139 45.3
TPR.G9531 Trifolium pratense HOM05D004639 ORTHO05D005201 8.2e-28 128.3 100 57.0
CDE02G2478 Ceratophyllum demersum HOM05D004639 ORTHO05D005201 5.3e-27 125.6 177 40.7
CBR_g51322 Chara braunii HOM05D004639 ORTHO05D005201 1.2e-26 124.4 139 44.6
C06p20180 Brassica napus HOM05D004639 ORTHO05D005201 5.9e-26 122.1 163 44.2
BolC6t37199H Brassica oleracea HOM05D004639 ORTHO05D005201 5.9e-26 122.1 163 44.2
Pp3c15_4380 Physcomitrium patens HOM05D004639 ORTHO05D005201 1.0e-25 121.3 138 42.8
HPP92_015991 Vanilla planifolia HOM05D004639 ORTHO05D005201 3.8e-25 119.4 99 55.6
Os09g0101100 Oryza sativa ssp. japonica HOM05D004639 ORTHO05D005201 5.0e-25 119.0 171 40.9
BcaC06g36658 Brassica carinata HOM05D004639 ORTHO05D005201 6.5e-25 118.6 140 46.4
Duzib235G0802 Durio zibethinus HOM05D004639 ORTHO05D005201 4.2e-24 115.9 139 46.8
Zm00001eb264110 Zea mays HOM05D004639 ORTHO05D005201 9.4e-24 114.8 175 39.4
Nitab4.5_0000843g0080 Nicotiana tabacum HOM05D004639 ORTHO05D005201 1.6e-23 114.0 150 46.0
Lalb_Chr18g0049251 Lupinus albus HOM05D004639 ORTHO05D005201 2.7e-23 113.2 99 52.5
AUR62032895 Chenopodium quinoa HOM05D004639 ORTHO05D005201 3.6e-23 112.8 180 40.0
Lalb_Chr00c55g0413711 Lupinus albus HOM05D004639 ORTHO05D005201 1.8e-22 110.5 97 52.6
unitig_22.g6364 Utricularia gibba HOM05D004639 ORTHO05D005201 3.9e-22 109.4 135 44.4
SMO334G0025 Selaginella moellendorffii HOM05D004639 ORTHO05D005201 1.1e-21 107.8 133 42.1
Sc22g0004560 Simmondsia chinensis HOM05D004639 ORTHO05D005201 8.2e-20 101.7 176 38.1
Gohir.D02G140450 Gossypium hirsutum HOM05D004639 ORTHO05D005201 2.9e-17 93.2 66 63.6
QL93p0107_0438 Quercus lobata HOM05D004639 ORTHO05D005201 6.5e-17 92.0 59 66.1
COL.COLO4_05916 Corchorus olitorius HOM05D004639 ORTHO05D005201 9.4e-16 88.2 117 41.0
Gorai.005G156200 Gossypium raimondii HOM05D004639 ORTHO05D005201 1.2e-15 87.8 66 60.6
PRCOL_00006916 Prasinoderma coloniale HOM05D004639 ORTHO05D005201 4.7e-15 85.9 137 36.5
Cre05.g234250 Chlamydomonas reinhardtii HOM05D004639 ORTHO05D005201 1.2e-13 81.3 136 34.6
Sed0017627 Sechium edule HOM05D004639 ORTHO05D005201 7.5e-13 78.6 143 35.0
CSS0047186 Camellia sinensis var. sinensis HOM05D004639 ORTHO05D005201 9.7e-13 78.2 110 41.8
CBR_g37349 Chara braunii HOM05D000004 ORTHO05D000002 3.5e-10 69.7 105 35.2
FAN23G0569 Fragaria x ananassa HOM05D004639 ORTHO05D005201 1.5e-08 64.3 65 47.7
unitig_22.g6365 Utricularia gibba HOM05D004639 ORTHO05D005201 9.4e-08 61.6 32 75.0
Medtr6g034730 Medicago truncatula HOM05D004639 ORTHO05D005201 1.2e-07 61.2 65 43.1
AT3G07930 Arabidopsis thaliana HOM05D004639 ORTHO05D005201 2.3e-06 57.0 65 46.2
HPP92_015994 Vanilla planifolia HOM05D004639 ORTHO05D005201 3.0e-06 56.6 32 68.8
CARHR082660 Cardamine hirsuta HOM05D004639 ORTHO05D005201 8.8e-06 55.1 55 49.1


User provided reference genes

Program Settings