Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0059400 Salix brachista HOM05D000623 ORTHO05D050763 5.1e-75 284.3 137 100.0
Potri.019G049800 Populus trichocarpa HOM05D000623 ORTHO05D006801 7.2e-29 131.0 99 67.7
Sabra17G0072200 Salix brachista HOM05D000623 ORTHO05D006801 1.0e-27 127.1 99 67.7
CSS0015652 Camellia sinensis var. sinensis HOM05D000623 ORTHO05D006801 1.1e-24 117.1 106 56.6
Manes.09G126700 Manihot esculenta HOM05D000623 ORTHO05D006801 1.1e-24 117.1 106 53.8
Cfa016037 Carpinus fangiana HOM05D000623 ORTHO05D006801 1.4e-24 116.7 106 56.6
Haze_00420 Corylus avellana HOM05D000623 ORTHO05D006801 1.4e-24 116.7 106 56.6
Dinv29156 Davidia involucrata HOM05D000623 ORTHO05D006801 4.1e-24 115.2 106 55.7
Duzib177G1063 Durio zibethinus HOM05D000623 ORTHO05D006801 4.1e-24 115.2 99 58.6
Nn7g37138 Nelumbo nucifera HOM05D000623 ORTHO05D006801 5.3e-24 114.8 108 52.8
Prupe.2G326700 Prunus persica HOM05D000623 ORTHO05D006801 5.3e-24 114.8 106 53.8
CiPaw.06G033100 Carya illinoinensis HOM05D000623 ORTHO05D006801 7.0e-24 114.4 106 55.7
Atru.BG.252.p Acer truncatum HOM05D000623 ORTHO05D006801 9.1e-24 114.0 106 54.7
FvH4_7g34020 Fragaria vesca HOM05D000623 ORTHO05D006801 1.6e-23 113.2 105 56.2
QL09p023747 Quercus lobata HOM05D000623 ORTHO05D006801 1.6e-23 113.2 106 54.7
TAR375G0749 Trochodendron aralioides HOM05D000623 ORTHO05D006801 1.6e-23 113.2 110 52.7
GSVIVG01014123001 Vitis vinifera HOM05D000623 ORTHO05D006801 1.6e-23 113.2 106 54.7
Glyma.11G107900 Glycine max HOM05D000623 ORTHO05D006801 2.0e-23 112.8 99 56.6
Hma1.2p1_1680F.1_g297150 Hydrangea macrophylla HOM05D000623 ORTHO05D006801 2.0e-23 112.8 106 53.8
Cc02_g00260 Coffea canephora HOM05D000623 ORTHO05D006801 2.6e-23 112.5 106 52.8
Glyma.12G017500 Glycine max HOM05D000623 ORTHO05D006801 2.6e-23 112.5 99 56.6
Actinidia08745 Actinidia chinensis HOM05D000074 ORTHO05D006801 3.5e-23 112.1 103 55.3
ClCG02G014450 Citrullus lanatus HOM05D000623 ORTHO05D006801 3.5e-23 112.1 112 52.7
SalBow4G1923 Salvia bowleyana HOM05D000623 ORTHO05D006801 3.5e-23 112.1 106 54.7
Ciclev10019794m.g Citrus clementina HOM05D000623 ORTHO05D006801 4.5e-23 111.7 99 57.6
CANSAT21G1001 Cannabis sativa HOM05D000623 ORTHO05D006801 7.7e-23 110.9 106 51.9
DCAR_009018 Daucus carota HOM05D000623 ORTHO05D006801 7.7e-23 110.9 106 54.7
FAN03G1666 Fragaria x ananassa HOM05D000623 ORTHO05D006801 7.7e-23 110.9 99 55.6
Lj3A887G70 Lonicera japonica HOM05D000623 ORTHO05D006801 7.7e-23 110.9 106 53.8
Eucgr.K00083 Eucalyptus grandis HOM05D000623 ORTHO05D006801 1.0e-22 110.5 99 55.6
Phvul.011G019900 Phaseolus vulgaris HOM05D000623 ORTHO05D006801 1.0e-22 110.5 99 53.5
RcHm_v2.0_Chr1g0384281 Rosa chinensis HOM05D000623 ORTHO05D006801 1.0e-22 110.5 99 55.6
Actinidia34310 Actinidia chinensis HOM05D000623 ORTHO05D006801 1.3e-22 110.2 98 57.1
AL6G27900 Arabidopsis lyrata HOM05D000623 ORTHO05D006801 1.3e-22 110.2 99 55.6
Cpa.g.sc43.87 Carica papaya HOM05D000623 ORTHO05D006801 1.3e-22 110.2 99 56.6
Sed0007302 Sechium edule HOM05D000623 ORTHO05D006801 1.3e-22 110.2 106 51.9
VMungo1127G0704 Vigna mungo HOM05D000623 ORTHO05D006801 1.3e-22 110.2 106 50.0
AT5G16890 Arabidopsis thaliana HOM05D000623 ORTHO05D006801 1.7e-22 109.8 99 54.5
A02p03830 Brassica napus HOM05D000623 ORTHO05D006801 1.7e-22 109.8 96 57.3
Sed0018270 Sechium edule HOM05D000623 ORTHO05D006801 2.2e-22 109.4 106 51.9
Thecc.05G214300 Theobroma cacao HOM05D000623 ORTHO05D006801 2.2e-22 109.4 99 56.6
PGR142G3700 Punica granatum HOM05D000623 ORTHO05D006801 2.9e-22 109.0 106 50.9
Rhsim03G0221800 Rhododendron simsii HOM05D000623 ORTHO05D006801 2.9e-22 109.0 106 52.8
COL.COLO4_37804 Corchorus olitorius HOM05D000623 ORTHO05D006801 3.8e-22 108.6 99 54.5
Lalb_Chr09g0320171 Lupinus albus HOM05D000623 ORTHO05D006801 3.8e-22 108.6 106 50.0
SalBow4G0865 Salvia bowleyana HOM05D000623 ORTHO05D006801 3.8e-22 108.6 106 53.8
arahy.Tifrunner.gnm1.ann1.03WG9V Arachis hypogaea HOM05D000623 ORTHO05D006801 5.0e-22 108.2 99 54.5
arahy.Tifrunner.gnm1.ann1.RS8UUT Arachis hypogaea HOM05D000623 ORTHO05D006801 5.0e-22 108.2 99 54.5
CsaV3_2G007550 Cucumis sativus L. HOM05D000623 ORTHO05D006801 5.0e-22 108.2 106 51.9
BolC2t06780H Brassica oleracea HOM05D000623 ORTHO05D006801 6.5e-22 107.8 99 55.6
MELO3C004131.2 Cucumis melo HOM05D000623 ORTHO05D006801 6.5e-22 107.8 106 50.9
BcaC03g18521 Brassica carinata HOM05D000623 ORTHO05D006801 8.5e-22 107.5 99 55.6
C02p08640 Brassica napus HOM05D000106 ORTHO05D006801 8.5e-22 107.5 99 55.6
BraA02t05349Z Brassica rapa HOM05D000623 ORTHO05D006801 8.5e-22 107.5 96 57.3
CiPaw.05G219300 Carya illinoinensis HOM05D000623 ORTHO05D006801 8.5e-22 107.5 106 50.9
Duzib128G0029 Durio zibethinus HOM05D000623 ORTHO05D006801 8.5e-22 107.5 99 54.5
Hund09794 Selenicereus undatus HOM05D000623 ORTHO05D006801 8.5e-22 107.5 106 50.0
vmacro06513 Vaccinium macrocarpon HOM05D000623 ORTHO05D006801 8.5e-22 107.5 99 55.6
MSTRG.26928 Avicennia marina HOM05D000623 ORTHO05D006801 1.1e-21 107.1 99 57.6
C09p60190 Brassica napus HOM05D000623 ORTHO05D006801 1.1e-21 107.1 96 56.2
BolC9t58852H Brassica oleracea HOM05D000623 ORTHO05D006801 1.1e-21 107.1 96 56.2
CDE08G0653 Ceratophyllum demersum HOM05D000623 ORTHO05D006801 1.1e-21 107.1 108 50.9
CDE09G1431 Ceratophyllum demersum HOM05D000623 ORTHO05D006801 1.1e-21 107.1 108 50.9
Gohir.D08G241900 Gossypium hirsutum HOM05D000623 ORTHO05D006801 1.1e-21 107.1 99 54.5
Gorai.004G257200 Gossypium raimondii HOM05D000623 ORTHO05D006801 1.1e-21 107.1 99 54.5
PSO339G0021 Papaver somniferum HOM05D000623 ORTHO05D006801 1.1e-21 107.1 108 50.0
TPR.G27321 Trifolium pratense HOM05D000623 ORTHO05D006801 1.1e-21 107.1 106 50.0
BraA03t10132Z Brassica rapa HOM05D000623 ORTHO05D006801 1.5e-21 106.7 99 53.5
BraA10t44293Z Brassica rapa HOM05D000623 ORTHO05D006801 1.5e-21 106.7 96 56.2
Carub.0006s1511 Capsella rubella HOM05D000623 ORTHO05D006801 1.5e-21 106.7 103 51.5
MBI19_g25012_MAGBIO Magnolia biondii HOM05D000623 ORTHO05D006801 1.5e-21 106.7 108 49.1
PSO384G3175 Papaver somniferum HOM05D000623 ORTHO05D006801 1.5e-21 106.7 108 50.0
BcaNung04949 Brassica carinata HOM05D000623 ORTHO05D006801 1.9e-21 106.3 106 50.9
Lsat_1_v5_gn_9_47601 Lactuca sativa HOM05D000623 ORTHO05D006801 1.9e-21 106.3 99 52.5
Peaxi162Scf00516g00649 Petunia axillaris HOM05D000623 ORTHO05D006801 1.9e-21 106.3 106 53.8
CARHR196270 Cardamine hirsuta HOM05D000623 ORTHO05D006801 2.5e-21 105.9 99 53.5
Ca_04914_v3 Cicer arietinum L. HOM05D000623 ORTHO05D006801 2.5e-21 105.9 106 49.1
DCAR_020410 Daucus carota HOM05D000623 ORTHO05D006801 2.5e-21 105.9 103 54.4
Thhalv10013266m.g Eutrema salsugineum HOM05D000623 ORTHO05D006801 2.5e-21 105.9 99 53.5
MD01G1236700 Malus domestica HOM05D000623 ORTHO05D006801 2.5e-21 105.9 106 50.9
Sp6g27210 Schrenkiella parvula HOM05D000623 ORTHO05D006801 2.5e-21 105.9 99 53.5
A03p08070 Brassica napus HOM05D000623 ORTHO05D006801 3.2e-21 105.5 99 53.5
AUR62002067 Chenopodium quinoa HOM05D000623 ORTHO05D006801 3.2e-21 105.5 106 50.9
Gohir.A08G221672 Gossypium hirsutum HOM05D000623 ORTHO05D006801 4.2e-21 105.1 99 53.5
Nitab4.5_0000021g0630 Nicotiana tabacum HOM05D000623 ORTHO05D006801 4.2e-21 105.1 106 52.8
MD07G1309300 Malus domestica HOM05D000623 ORTHO05D006801 5.5e-21 104.8 106 50.0
Medtr4g077920 Medicago truncatula HOM05D000623 ORTHO05D006801 5.5e-21 104.8 106 49.1
Aa31LG11G12690 Aethionema arabicum HOM05D000623 ORTHO05D006801 7.2e-21 104.4 99 53.5
A10p22340 Brassica napus HOM05D000623 ORTHO05D006801 7.2e-21 104.4 96 55.2
C03p09330 Brassica napus HOM05D000623 ORTHO05D006801 7.2e-21 104.4 99 52.5
Lj3g0009745 Lotus japonicus HOM05D000623 ORTHO05D006801 7.2e-21 104.4 106 49.1
Solyc03g097060.4 Solanum lycopersicum HOM05D000623 ORTHO05D006801 7.2e-21 104.4 106 50.9
Rhsim07G0247900 Rhododendron simsii HOM05D000623 ORTHO05D006801 9.4e-21 104.0 106 50.9
TAR375G0083 Trochodendron aralioides HOM05D000623 ORTHO05D006801 9.4e-21 104.0 101 51.5
AUR62028180 Chenopodium quinoa HOM05D000623 ORTHO05D006801 1.2e-20 103.6 106 50.0
Gohir.D03G051000 Gossypium hirsutum HOM05D000623 ORTHO05D006801 1.2e-20 103.6 99 52.5
Gorai.003G052700 Gossypium raimondii HOM05D000623 ORTHO05D006801 1.2e-20 103.6 99 52.5
HanXRQChr03g0088471 Helianthus annuus HOM05D000623 ORTHO05D006801 1.2e-20 103.6 99 52.5
THA.LOC104827211 Tarenaya hassleriana HOM05D000623 ORTHO05D006801 1.2e-20 103.6 106 50.0
BcaB01g04966 Brassica carinata HOM05D000623 ORTHO05D006801 1.6e-20 103.2 99 52.5
Psat7g170560 Pisum sativum HOM05D000623 ORTHO05D006801 2.1e-20 102.8 106 48.1
Sc19g0000160 Simmondsia chinensis HOM05D000623 ORTHO05D006801 2.1e-20 102.8 106 49.1
Sopen03g027800 Solanum pennellii HOM05D000623 ORTHO05D006801 2.7e-20 102.4 106 50.9
PGSC0003DMG402003156 Solanum tuberosum HOM05D000623 ORTHO05D006801 2.7e-20 102.4 106 50.9
unitig_60.g25782 Utricularia gibba HOM05D000623 ORTHO05D006801 2.7e-20 102.4 106 50.0
SGA_v2.0_scaffold18G08512 Striga asiatica HOM05D000623 ORTHO05D006801 4.7e-20 101.7 106 51.9
CAN.G1131.16 Capsicum annuum HOM05D000623 ORTHO05D006801 8.0e-20 100.9 106 50.9
ECA232G1729 Erigeron canadensis HOM05D002083 ORTHO05D006801 8.0e-20 100.9 99 50.5
ATR1096G091 Amborella trichopoda HOM05D000623 ORTHO05D006801 1.0e-19 100.5 108 48.1
Ah.13g072730 Amaranthus hybridus HOM05D000623 ORTHO05D006801 1.4e-19 100.1 79 59.5
EL10Ac3g05072 Beta vulgaris HOM05D000623 ORTHO05D006801 1.4e-19 100.1 106 46.2
Thhalv10020554m.g Eutrema salsugineum HOM05D000623 ORTHO05D006801 1.4e-19 100.1 99 49.5
Migut.F00093 Erythranthe guttata HOM05D000623 ORTHO05D006801 2.3e-19 99.4 106 50.9
Zm00001eb150150 Zea mays HOM05D000623 ORTHO05D006801 2.3e-19 99.4 106 47.2
BolC3t13428H Brassica oleracea HOM05D000623 ORTHO05D006801 3.0e-19 99.0 99 50.5
THA.LOC104802924 Tarenaya hassleriana HOM05D000623 ORTHO05D006801 4.0e-19 98.6 106 47.2
SGA_v2.0_scaffold44G16894 Striga asiatica HOM05D000623 ORTHO05D006801 3.4e-18 95.5 106 50.0
Oeu063726.1 Olea europaea HOM05D000623 ORTHO05D006801 2.2e-14 82.8 130 40.0
SEGI_19686 Sequoiadendron giganteum HOM05D000623 ORTHO05D006801 3.8e-14 82.0 98 46.9
Nitab4.5_0001762g0090 Nicotiana tabacum HOM05D000623 ORTHO05D006801 8.5e-14 80.9 79 54.4
Rhsim13G0060400 Rhododendron simsii HOM05D001179 ORTHO05D339156 1.1e-13 80.5 71 53.5
Pp3c14_19620 Physcomitrium patens HOM05D000623 ORTHO05D006801 4.0e-11 72.0 97 38.1
HPP92_013283 Vanilla planifolia HOM05D000623 ORTHO05D050763 6.8e-11 71.2 71 47.9
SEGI_35165 Sequoiadendron giganteum HOM05D000623 ORTHO05D006801 1.1e-08 63.9 61 54.1


User provided reference genes

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