Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0056400 Salix brachista HOM05D007504 ORTHO05D007629 2.3e-224 781.9 397 100.0
Potri.019G052300 Populus trichocarpa HOM05D007504 ORTHO05D007629 6.2e-158 561.2 477 67.1
Cfa006286 Carpinus fangiana HOM05D007504 ORTHO05D007629 3.2e-45 186.8 473 33.4
Atru.chr12.1547 Acer truncatum HOM05D007504 ORTHO05D007629 2.7e-44 183.7 537 33.9
Dinv02913 Davidia involucrata HOM05D007504 ORTHO05D007629 2.1e-41 174.1 612 30.4
Manes.08G105000 Manihot esculenta HOM05D007504 ORTHO05D007629 8.2e-41 172.2 404 36.6
CiPaw.07G074500 Carya illinoinensis HOM05D007504 ORTHO05D007629 1.7e-38 164.5 474 33.3
Haze_04521 Corylus avellana HOM05D007504 ORTHO05D007629 1.9e-37 161.0 534 29.4
Actinidia38910 Actinidia chinensis HOM05D007504 ORTHO05D007629 2.1e-36 157.5 608 28.3
Rhsim09G0131100 Rhododendron simsii HOM05D007504 ORTHO05D007629 2.5e-34 150.6 548 28.5
TWI59G0549 Tripterygium wilfordii HOM05D007504 ORTHO05D007629 2.5e-34 150.6 486 30.2
MD12G1258000 Malus domestica HOM05D007504 ORTHO05D007629 3.7e-33 146.7 579 28.7
PGR031G1611 Punica granatum HOM05D007504 ORTHO05D007629 4.8e-33 146.4 471 29.9
Eucgr.H01377 Eucalyptus grandis HOM05D007504 ORTHO05D007629 6.3e-33 146.0 488 29.7
TWI14G0943 Tripterygium wilfordii HOM05D007504 ORTHO05D007629 3.1e-32 143.7 479 29.6
CSS0023929 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 4.1e-32 143.3 502 30.3
Ciclev10011923m.g Citrus clementina HOM05D007504 ORTHO05D007629 1.7e-30 137.9 230 39.1
RcHm_v2.0_Chr3g0448301 Rosa chinensis HOM05D007504 ORTHO05D007629 3.2e-29 133.7 486 29.2
THA.LOC104823805 Tarenaya hassleriana HOM05D009566 ORTHO05D007629 5.5e-29 132.9 412 32.3
Hund21875 Selenicereus undatus HOM05D007504 ORTHO05D007629 9.4e-29 132.1 454 30.2
COL.COLO4_06844 Corchorus olitorius HOM05D007504 ORTHO05D007629 2.7e-28 130.6 162 47.5
Duzib177G0136 Durio zibethinus HOM05D007504 ORTHO05D007629 7.9e-28 129.0 174 46.0
Cc09_g03320 Coffea canephora HOM05D007504 ORTHO05D007629 1.0e-27 128.6 512 27.7
VMungo0720G1881 Vigna mungo HOM05D007504 ORTHO05D007629 1.0e-27 128.6 507 27.0
Thecc.05G204700 Theobroma cacao HOM05D007504 ORTHO05D007629 3.0e-27 127.1 175 42.3
Aqoxy2G03947 Aquilegia oxysepala HOM05D007504 ORTHO05D007629 1.1e-26 125.2 520 27.9
FAN09G1848 Fragaria x ananassa HOM05D007504 ORTHO05D007629 2.0e-26 124.4 526 26.6
Lalb_Chr21g0311381 Lupinus albus HOM05D007504 ORTHO05D007629 2.0e-26 124.4 426 29.3
GSVIVG01019149001 Vitis vinifera HOM05D007504 ORTHO05D007629 4.3e-26 123.2 161 46.6
EL10Ac4g09412 Beta vulgaris HOM05D007504 ORTHO05D007629 9.7e-26 122.1 154 47.4
CsaV3_1G037800 Cucumis sativus L. HOM05D007504 ORTHO05D007629 2.8e-25 120.6 370 30.3
Gohir.D13G093400 Gossypium hirsutum HOM05D007504 ORTHO05D007629 2.8e-25 120.6 257 34.2
AL2G19730 Arabidopsis lyrata HOM05D009566 ORTHO05D007629 8.2e-25 119.0 374 29.7
Gorai.002G147900 Gossypium raimondii HOM05D007504 ORTHO05D007629 8.2e-25 119.0 257 34.2
Gohir.A13G089900 Gossypium hirsutum HOM05D007504 ORTHO05D007629 1.1e-24 118.6 240 35.0
ClCG01G008930 Citrullus lanatus HOM05D007504 ORTHO05D007629 3.1e-24 117.1 404 30.4
MELO3C021807.2 Cucumis melo HOM05D007504 ORTHO05D007629 4.1e-24 116.7 372 31.2
Thhalv10005424m.g Eutrema salsugineum HOM05D009566 ORTHO05D007629 4.1e-24 116.7 360 30.3
BraA02t06358Z Brassica rapa HOM05D009566 ORTHO05D007629 6.9e-24 115.9 360 27.8
DCAR_029902 Daucus carota HOM05D007504 ORTHO05D007629 6.9e-24 115.9 229 36.2
Sed0012429 Sechium edule HOM05D007504 ORTHO05D007629 1.2e-23 115.2 369 32.0
PGSC0003DMG400016931 Solanum tuberosum HOM05D007504 ORTHO05D007629 1.2e-23 115.2 558 26.2
AUR62006721 Chenopodium quinoa HOM05D007504 ORTHO05D007629 3.4e-23 113.6 278 34.5
FvH4_6g00830 Fragaria vesca HOM05D007504 ORTHO05D007629 4.5e-23 113.2 623 24.9
CDE05G0344 Ceratophyllum demersum HOM05D007504 ORTHO05D007629 7.7e-23 112.5 376 27.4
FAN14G3522 Fragaria x ananassa HOM05D007504 ORTHO05D007629 7.7e-23 112.5 621 25.0
BolC2t08254H Brassica oleracea HOM05D009566 ORTHO05D007629 1.0e-22 112.1 360 28.9
BcaC03g14675 Brassica carinata HOM05D009566 ORTHO05D007629 1.3e-22 111.7 367 28.6
C02p21140 Brassica napus HOM05D009566 ORTHO05D007629 1.3e-22 111.7 360 28.3
Nitab4.5_0000276g0060 Nicotiana tabacum HOM05D007504 ORTHO05D007629 1.7e-22 111.3 554 25.6
CDE05G2205 Ceratophyllum demersum HOM05D007504 ORTHO05D007629 2.9e-22 110.5 377 30.8
Glyma.20G219900 Glycine max HOM05D007504 ORTHO05D007629 2.9e-22 110.5 565 25.5
AT5G36100 Arabidopsis thaliana HOM05D009566 ORTHO05D007629 8.5e-22 109.0 356 28.4
Lsat_1_v5_gn_8_3001 Lactuca sativa HOM05D007504 ORTHO05D007629 8.5e-22 109.0 590 25.9
Nitab4.5_0000456g0090 Nicotiana tabacum HOM05D007504 ORTHO05D007629 8.5e-22 109.0 554 24.9
Carub.0007s3177 Capsella rubella HOM05D009566 ORTHO05D007629 1.9e-21 107.8 357 26.9
Sp7g06100 Schrenkiella parvula HOM05D009566 ORTHO05D007629 1.9e-21 107.8 368 28.3
A02p13020 Brassica napus HOM05D009566 ORTHO05D007629 2.5e-21 107.5 360 29.4
Lj7A601T114 Lonicera japonica HOM05D007504 ORTHO05D007629 2.5e-21 107.5 201 36.8
Medtr1g078420 Medicago truncatula HOM05D007504 ORTHO05D007629 2.5e-21 107.5 213 34.3
TPR.G14656 Trifolium pratense HOM05D007504 ORTHO05D007629 4.2e-21 106.7 148 41.2
Solyc04g051280.4 Solanum lycopersicum HOM05D007504 ORTHO05D007629 5.5e-21 106.3 577 24.4
MD04G1241000 Malus domestica HOM05D007504 ORTHO05D007629 7.2e-21 105.9 162 42.0
PSO017G3378 Papaver somniferum HOM05D007504 ORTHO05D007629 9.4e-21 105.5 73 65.8
TAR636G3585 Trochodendron aralioides HOM05D007504 ORTHO05D007629 9.4e-21 105.5 70 70.0
Ah.06g195770 Amaranthus hybridus HOM05D007504 ORTHO05D007629 1.2e-20 105.1 584 23.5
SHI33673 Sapria himalayana HOM05D007504 ORTHO05D000001 1.2e-20 105.1 366 31.1
SGA_v2.0_scaffold10G05147 Striga asiatica HOM05D007504 ORTHO05D007629 1.6e-20 104.8 426 27.9
Peaxi162Scf00994g00026 Petunia axillaris HOM05D007504 ORTHO05D007629 2.1e-20 104.4 574 25.8
QL01p050471 Quercus lobata HOM05D007504 ORTHO05D007629 2.1e-20 104.4 71 66.2
ECA233G2160 Erigeron canadensis HOM05D007504 ORTHO05D007629 2.7e-20 104.0 153 43.8
AT1G65090 Arabidopsis thaliana HOM05D009566 ORTHO05D007629 3.6e-20 103.6 373 29.2
BcaB05g24082 Brassica carinata HOM05D009566 ORTHO05D007629 4.7e-20 103.2 374 26.5
MBI07_g00623_MAGBIO Magnolia biondii HOM05D007504 ORTHO05D007629 4.7e-20 103.2 89 56.2
Sc09g0001640 Simmondsia chinensis HOM05D007504 ORTHO05D007629 4.7e-20 103.2 518 25.1
Lj5g0006161 Lotus japonicus HOM05D007504 ORTHO05D007629 1.0e-19 102.1 604 23.2
ATR0609G092 Amborella trichopoda HOM05D007504 ORTHO05D007629 2.3e-19 100.9 71 63.4
CSS0029071 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 5.1e-19 99.8 72 68.1
CAN.G29.22 Capsicum annuum HOM05D007504 ORTHO05D007629 1.5e-18 98.2 598 24.4
Ca_09972_v3 Cicer arietinum L. HOM05D007504 ORTHO05D007629 1.5e-18 98.2 210 35.2
CARHR216660 Cardamine hirsuta HOM05D009566 ORTHO05D007629 3.3e-18 97.1 361 27.4
Psat6g051960 Pisum sativum HOM05D007504 ORTHO05D007629 3.3e-18 97.1 182 35.2
BolC4t25935H Brassica oleracea HOM05D009566 ORTHO05D007629 9.7e-18 95.5 365 26.6
BcaC02g09508 Brassica carinata HOM05D009566 ORTHO05D007629 1.3e-17 95.1 365 26.0
SalBow6G5451 Salvia bowleyana HOM05D007504 ORTHO05D007629 1.7e-17 94.7 378 26.7
C04p43550 Brassica napus HOM05D009566 ORTHO05D007629 2.2e-17 94.4 373 25.5
Cpa.g.sc123.14 Carica papaya HOM05D007504 ORTHO05D007629 2.2e-17 94.4 72 62.5
AUR62000366 Chenopodium quinoa HOM05D007504 ORTHO05D007629 2.4e-16 90.9 277 30.0
BcaB06g27006 Brassica carinata HOM05D009566 ORTHO05D007629 9.1e-16 89.0 366 25.7
Oeu008540.1 Olea europaea HOM05D007504 ORTHO05D007629 1.3e-14 85.1 78 50.0
Aa31LG9G17880 Aethionema arabicum HOM05D009566 ORTHO05D007629 2.9e-14 84.0 378 24.9
Migut.F01885 Erythranthe guttata HOM05D007504 ORTHO05D007629 2.9e-14 84.0 206 32.5
FAN05G3219 Fragaria x ananassa HOM05D007504 ORTHO05D007629 2.9e-14 84.0 279 31.2
Glyma.10G170100 Glycine max HOM05D007504 ORTHO05D007629 3.8e-14 83.6 129 39.5
arahy.Tifrunner.gnm1.ann1.DN7JE5 Arachis hypogaea HOM05D007504 ORTHO05D007629 8.5e-14 82.4 73 53.4
BraA04t16670Z Brassica rapa HOM05D009566 ORTHO05D007629 8.5e-14 82.4 367 25.1
TAR636G2263 Trochodendron aralioides HOM05D007504 ORTHO05D007629 8.5e-14 82.4 143 42.0
arahy.Tifrunner.gnm1.ann1.V3BTAU Arachis hypogaea HOM05D007504 ORTHO05D007629 1.1e-13 82.0 73 52.1
QL01p050434 Quercus lobata HOM05D007504 ORTHO05D007629 1.1e-13 82.0 197 35.5
A04p10080 Brassica napus HOM05D009566 ORTHO05D007629 1.9e-13 81.3 366 26.5
HPP92_009958 Vanilla planifolia HOM05D007504 ORTHO05D007629 3.2e-13 80.5 436 24.5
HanXRQChr05g0156881 Helianthus annuus HOM05D007504 ORTHO05D007629 4.2e-13 80.1 249 31.3
Phvul.010G077946 Phaseolus vulgaris HOM05D007504 ORTHO05D007629 5.5e-13 79.7 73 47.9
Aa31LG2G2280 Aethionema arabicum HOM05D009566 ORTHO05D007629 9.4e-13 79.0 370 25.9
Sopen04g022690 Solanum pennellii HOM05D007504 ORTHO05D007629 1.6e-12 78.2 209 33.0
BcaB02g08045 Brassica carinata HOM05D009566 ORTHO05D007629 2.1e-12 77.8 344 25.9
SEGI_35581 Sequoiadendron giganteum HOM05D007504 ORTHO05D007629 2.1e-12 77.8 66 53.0
Nn1g08319 Nelumbo nucifera HOM05D007504 ORTHO05D007629 2.7e-12 77.4 50 72.0
Prupe.6G358500 Prunus persica HOM05D007504 ORTHO05D007629 6.1e-12 76.3 261 31.0
CSS0043883 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 8.0e-12 75.9 219 32.0
Os12g0506700 Oryza sativa ssp. japonica HOM05D007504 ORTHO05D007629 8.0e-12 75.9 75 50.7
Phvul.010G077868 Phaseolus vulgaris HOM05D007504 ORTHO05D007629 3.0e-11 73.9 223 34.1
Oeu014606.1 Olea europaea HOM05D007504 ORTHO05D007629 1.1e-10 72.0 103 43.7
AL7G45070 Arabidopsis lyrata HOM05D009566 ORTHO05D007629 9.7e-10 68.9 101 41.6
THA.LOC104821804 Tarenaya hassleriana HOM05D009566 ORTHO05D007629 9.7e-10 68.9 140 35.0
Carub.0002s1043 Capsella rubella HOM05D009566 ORTHO05D007629 1.7e-09 68.2 198 31.3
Sp5g19730 Schrenkiella parvula HOM05D009566 ORTHO05D007629 7.0e-08 62.8 164 36.0
Sc09g0001620 Simmondsia chinensis HOM05D007504 ORTHO05D007629 1.2e-07 62.0 88 39.8
CARHR056580 Cardamine hirsuta HOM05D009566 ORTHO05D007629 5.9e-07 59.7 210 31.0
Cpa.g.sc123.15 Carica papaya HOM05D007504 ORTHO05D007629 5.0e-06 56.6 55 52.7


User provided reference genes

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