Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0056300 Salix brachista HOM05D006369 ORTHO05D007764 3.0e-58 228.4 123 100.0
Potri.019G052400 Populus trichocarpa HOM05D006369 ORTHO05D007764 1.1e-36 156.8 93 94.6
Manes.08G163800 Manihot esculenta HOM05D006369 ORTHO05D007764 5.7e-25 117.9 93 72.0
Ciclev10021854m.g Citrus clementina HOM05D006369 ORTHO05D007764 8.2e-24 114.0 94 70.2
Atru.chr7.1119 Acer truncatum HOM05D006369 ORTHO05D007764 4.1e-23 111.7 96 65.6
Dinv29169 Davidia involucrata HOM05D006369 ORTHO05D007764 9.0e-23 110.5 94 68.1
Thecc.03G000800 Theobroma cacao HOM05D006369 ORTHO05D007764 1.0e-21 107.1 93 69.9
Hma1.2p1_1235F.1_g269100 Hydrangea macrophylla HOM05D006369 ORTHO05D007764 1.7e-21 106.3 93 67.7
MD07G1306400 Malus domestica HOM05D006369 ORTHO05D007764 1.4e-20 103.2 94 63.8
RcHm_v2.0_Chr1g0383921 Rosa chinensis HOM05D006369 ORTHO05D007764 2.5e-20 102.4 94 64.9
COL.COLO4_13442 Corchorus olitorius HOM05D006369 ORTHO05D007764 4.6e-19 98.2 94 63.8
FvH4_7g33790 Fragaria vesca HOM05D006369 ORTHO05D007764 7.9e-19 97.4 94 64.9
FAN01G2653 Fragaria x ananassa HOM05D006369 ORTHO05D007764 7.9e-19 97.4 94 64.9
FAN03G1142 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.0e-18 97.1 94 64.9
FAN03G2967 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.0e-18 97.1 94 64.9
FAN10G1961 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.8e-18 96.3 94 63.8
FAN10G2535 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.8e-18 96.3 94 63.8
Duzib211G0044 Durio zibethinus HOM05D006369 ORTHO05D007764 2.3e-18 95.9 93 63.4
CiPaw.05G237500 Carya illinoinensis HOM05D006369 ORTHO05D007764 3.0e-18 95.5 94 60.6
Haze_00598 Corylus avellana HOM05D006369 ORTHO05D007764 8.8e-18 94.0 95 58.9
MD01G1234200 Malus domestica HOM05D006369 ORTHO05D007764 2.5e-17 92.4 95 58.9
Prupe.2G324400 Prunus persica HOM05D006369 ORTHO05D007764 4.3e-17 91.7 94 59.6
CiPaw.06G019700 Carya illinoinensis HOM05D006369 ORTHO05D007764 2.2e-16 89.4 92 56.5
ClCG10G009050 Citrullus lanatus HOM05D006369 ORTHO05D007764 2.8e-16 89.0 95 56.8
CsaV3_4G008720 Cucumis sativus L. HOM05D006369 ORTHO05D007764 6.3e-16 87.8 95 57.9
Gorai.001G204600 Gossypium raimondii HOM05D006369 ORTHO05D007764 6.3e-16 87.8 93 60.2
Cfa015892 Carpinus fangiana HOM05D006369 ORTHO05D007764 8.2e-16 87.4 96 57.3
Gohir.A07G176900 Gossypium hirsutum HOM05D006369 ORTHO05D007764 8.2e-16 87.4 93 60.2
Gohir.D07G184401 Gossypium hirsutum HOM05D006369 ORTHO05D007764 8.2e-16 87.4 93 60.2
TAR365G0740 Trochodendron aralioides HOM05D006369 ORTHO05D007764 1.8e-15 86.3 93 57.0
MELO3C024871.2 Cucumis melo HOM05D006369 ORTHO05D007764 2.4e-15 85.9 95 53.7
CSS0035893 Camellia sinensis var. sinensis HOM05D006369 ORTHO05D007764 1.5e-14 83.2 101 55.4
Lj1A1033G61 Lonicera japonica HOM05D006369 ORTHO05D007764 1.5e-14 83.2 99 59.6
Oeu005324.1 Olea europaea HOM05D006369 ORTHO05D007764 3.4e-14 82.0 90 56.7
Phvul.011G021200 Phaseolus vulgaris HOM05D006369 ORTHO05D007764 3.4e-14 82.0 93 59.1
CANSAT21G0373 Cannabis sativa HOM05D006369 ORTHO05D007764 1.4e-12 76.6 101 55.4
Migut.F00102 Erythranthe guttata HOM05D006369 ORTHO05D007764 1.4e-12 76.6 92 54.3
Lalb_Chr19g0139881 Lupinus albus HOM05D006369 ORTHO05D007764 2.5e-12 75.9 94 51.1
Cc02_g00390 Coffea canephora HOM05D006369 ORTHO05D007764 4.2e-12 75.1 93 51.6
Glyma.12G018800 Glycine max HOM05D006369 ORTHO05D007764 5.5e-12 74.7 95 55.8
Nitab4.5_0000001g0150 Nicotiana tabacum HOM05D006369 ORTHO05D007764 2.1e-11 72.8 95 45.3
Actinidia00694 Actinidia chinensis HOM05D006369 ORTHO05D007764 3.6e-11 72.0 92 54.3
Ca_04928_v3 Cicer arietinum L. HOM05D006369 ORTHO05D007764 1.4e-10 70.1 94 46.8
Glyma.11G092500 Glycine max HOM05D006369 ORTHO05D007764 1.8e-10 69.7 95 51.6
Ah.08g212670 Amaranthus hybridus HOM05D006369 ORTHO05D007764 2.3e-10 69.3 98 50.0
MSTRG.8579 Avicennia marina HOM05D006369 ORTHO05D007764 2.3e-10 69.3 91 48.4
CAN.G317.12 Capsicum annuum HOM05D006369 ORTHO05D007764 2.3e-10 69.3 94 45.7
Sed0025457 Sechium edule HOM05D006369 ORTHO05D007764 3.0e-10 68.9 99 53.5
VMungo1127G0993 Vigna mungo HOM05D006369 ORTHO05D007764 3.0e-10 68.9 93 54.8
Nitab4.5_0000820g0010 Nicotiana tabacum HOM05D006369 ORTHO05D007764 5.1e-10 68.2 96 45.8
BcaNung00427 Brassica carinata HOM05D006369 ORTHO05D007764 6.7e-10 67.8 89 50.6
Psat7g171520 Pisum sativum HOM05D006369 ORTHO05D007764 6.7e-10 67.8 96 51.0
PGSC0003DMG401008641 Solanum tuberosum HOM05D006369 ORTHO05D007764 2.6e-09 65.9 95 46.3
AL6G28090 Arabidopsis lyrata HOM05D006369 ORTHO05D007764 4.4e-09 65.1 91 47.3
Rhsim13G0016700 Rhododendron simsii HOM05D006369 ORTHO05D007764 5.7e-09 64.7 113 44.2
A02p03940 Brassica napus HOM05D006369 ORTHO05D007764 1.7e-08 63.2 93 49.5
vmacro02505 Vaccinium macrocarpon HOM05D006369 ORTHO05D007764 2.2e-08 62.8 101 46.5
CARHR196110 Cardamine hirsuta HOM05D006369 ORTHO05D007764 2.8e-08 62.4 89 49.4
BcaB01g04960 Brassica carinata HOM05D006369 ORTHO05D007764 4.8e-08 61.6 93 47.3
BraA02t05358Z Brassica rapa HOM05D006369 ORTHO05D007764 4.8e-08 61.6 96 47.9
Hund18049 Selenicereus undatus HOM05D006369 ORTHO05D007764 4.8e-08 61.6 102 44.1
BolC3t13440H Brassica oleracea HOM05D006369 ORTHO05D007764 6.3e-08 61.2 94 46.8
THA.LOC104820876 Tarenaya hassleriana HOM05D006369 ORTHO05D007764 6.3e-08 61.2 93 49.5
Carub.0006s1525 Capsella rubella HOM05D006369 ORTHO05D007764 8.2e-08 60.8 91 49.5
AT5G17070 Arabidopsis thaliana HOM05D006369 ORTHO05D007764 1.4e-07 60.1 89 48.3
BcaC03g18532 Brassica carinata HOM05D006369 ORTHO05D007764 1.4e-07 60.1 89 48.3
C02p08760 Brassica napus HOM05D006369 ORTHO05D007764 1.4e-07 60.1 89 48.3
BolC2t06790H Brassica oleracea HOM05D006369 ORTHO05D007764 1.4e-07 60.1 89 48.3
EL10Ac7g17391 Beta vulgaris HOM05D006369 ORTHO05D007764 1.8e-07 59.7 98 43.9
Nn3g21321 Nelumbo nucifera HOM05D006369 ORTHO05D007764 1.8e-07 59.7 88 45.5
Sp6g27090 Schrenkiella parvula HOM05D006369 ORTHO05D007764 3.1e-07 58.9 90 46.7
Solyc03g062680.3 Solanum lycopersicum HOM05D006369 ORTHO05D007764 4.1e-07 58.5 96 44.8
DCAR_020401 Daucus carota HOM05D006369 ORTHO05D007764 7.0e-07 57.8 83 47.0
arahy.Tifrunner.gnm1.ann1.F9R2PF Arachis hypogaea HOM05D006369 ORTHO05D007764 9.1e-07 57.4 93 46.2
arahy.Tifrunner.gnm1.ann1.WFP97B Arachis hypogaea HOM05D006369 ORTHO05D007764 9.1e-07 57.4 94 45.7
Thhalv10014449m.g Eutrema salsugineum HOM05D006369 ORTHO05D007764 1.2e-06 57.0 97 43.3
SalBow4G3280 Salvia bowleyana HOM05D006369 ORTHO05D007764 1.2e-06 57.0 88 37.5
SGA_v2.0_scaffold18G08505 Striga asiatica HOM05D006369 ORTHO05D007764 1.2e-06 57.0 90 43.3
Peaxi162Scf00076g00928 Petunia axillaris HOM05D006369 ORTHO05D007764 1.5e-06 56.6 60 55.0
Eucgr.A02962 Eucalyptus grandis HOM05D006369 ORTHO05D007764 2.6e-06 55.8 86 40.7
Sopen03g015000 Solanum pennellii HOM05D006369 ORTHO05D007764 2.6e-06 55.8 96 44.8
Aqoxy2G03109 Aquilegia oxysepala HOM05D006369 ORTHO05D007764 5.9e-06 54.7 93 46.2
GSVIVG01024423001 Vitis vinifera HOM05D006369 ORTHO05D007764 5.9e-06 54.7 61 60.7


User provided reference genes

Program Settings