Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0051900 Salix brachista HOM05D002479 ORTHO05D002675 2.2e-178 629.0 359 100.0
Sabra19G0052000 Salix brachista HOM05D002479 ORTHO05D002675 2.2e-178 629.0 359 100.0
Sabra11G0090800 Salix brachista HOM05D002479 ORTHO05D002675 2.9e-146 522.3 359 79.1
Sabra15G0052600 Salix brachista HOM05D002479 ORTHO05D002675 9.1e-124 447.6 355 71.5
Sabra03G0030600 Salix brachista HOM05D002479 ORTHO05D002675 1.6e-112 410.2 386 68.7
Sabra10G0036100 Salix brachista HOM05D002479 ORTHO05D002675 2.4e-108 396.4 404 65.6
Sabra16G0279300 Salix brachista HOM05D002479 ORTHO05D002675 4.1e-108 395.6 332 68.7
Sabra03G0044800 Salix brachista HOM05D002479 ORTHO05D002675 6.0e-83 312.0 250 70.4
Rhsim05G0175800 Rhododendron simsii HOM05D002479 ORTHO05D002675 3.0e-42 176.8 317 36.3
Sabra10G0064300 Salix brachista HOM05D002479 ORTHO05D002675 6.7e-42 175.6 133 80.5
Potri.010G078900 Populus trichocarpa HOM05D002479 ORTHO05D002675 4.3e-41 172.9 133 78.2
CDE06G1783 Ceratophyllum demersum HOM05D002479 ORTHO05D002675 9.3e-36 155.2 229 40.2
Sabra03G0044700 Salix brachista HOM05D002479 ORTHO05D002675 1.1e-33 148.3 120 67.5
Ah.13g068120 Amaranthus hybridus HOM05D002479 ORTHO05D002675 7.4e-33 145.6 237 42.2
Manes.15G035300 Manihot esculenta HOM05D002479 ORTHO05D002675 1.5e-30 137.9 129 67.4
THA.LOC104808589 Tarenaya hassleriana HOM05D002479 ORTHO05D002675 2.2e-29 134.0 182 47.8
FAN22G0099 Fragaria x ananassa HOM05D002479 ORTHO05D002675 5.5e-28 129.4 126 69.0
RcHm_v2.0_Chr4g0388991 Rosa chinensis HOM05D002479 ORTHO05D002675 5.5e-28 129.4 128 67.2
QL06p014970 Quercus lobata HOM05D002479 ORTHO05D002675 1.6e-27 127.9 131 68.7
FAN17G1196 Fragaria x ananassa HOM05D002479 ORTHO05D002675 4.6e-27 126.3 126 74.6
Gohir.D09G223800 Gossypium hirsutum HOM05D002479 ORTHO05D002675 7.9e-27 125.6 132 61.4
MD13G1203500 Malus domestica HOM05D002479 ORTHO05D002675 7.9e-27 125.6 170 52.4
CiPaw.01G192700 Carya illinoinensis HOM05D002479 ORTHO05D002675 1.0e-26 125.2 131 51.9
Ciclev10004292m.g Citrus clementina HOM05D002479 ORTHO05D002675 1.8e-26 124.4 132 51.5
Gorai.006G245300 Gossypium raimondii HOM05D002479 ORTHO05D002675 3.0e-26 123.6 132 54.5
Thecc.04G243400 Theobroma cacao HOM05D002479 ORTHO05D002675 3.9e-26 123.2 129 65.9
FAN12G1103 Fragaria x ananassa HOM05D002479 ORTHO05D002675 5.1e-26 122.9 128 74.2
GSVIVG01018090001 Vitis vinifera HOM05D002479 ORTHO05D002675 5.1e-26 122.9 128 51.6
Cfa008402 Carpinus fangiana HOM05D002479 ORTHO05D002675 8.8e-26 122.1 132 64.4
Prupe.1G026500 Prunus persica HOM05D002479 ORTHO05D002675 1.5e-25 121.3 120 67.5
Haze_11266 Corylus avellana HOM05D002479 ORTHO05D002675 2.5e-25 120.6 132 63.6
Gohir.A09G221700 Gossypium hirsutum HOM05D002479 ORTHO05D002675 2.5e-25 120.6 233 42.9
Duzib212G0327 Durio zibethinus HOM05D002479 ORTHO05D002675 3.3e-25 120.2 132 62.1
COL.COLO4_15763 Corchorus olitorius HOM05D003117 ORTHO05D003612 4.3e-25 119.8 132 57.6
Cpa.g.sc58.9 Carica papaya HOM05D002479 ORTHO05D002675 7.4e-25 119.0 129 65.9
BcaB06g26423 Brassica carinata HOM05D002479 ORTHO05D002675 4.8e-24 116.3 167 51.5
BraA05t21449Z Brassica rapa HOM05D002479 ORTHO05D002675 6.3e-24 115.9 164 55.5
CANSAT78G2316 Cannabis sativa HOM05D002479 ORTHO05D002675 8.2e-24 115.5 131 48.9
Atru.chr4.2287 Acer truncatum HOM05D002479 ORTHO05D002675 1.1e-23 115.2 132 49.2
Nitab4.5_0007585g0010 Nicotiana tabacum HOM05D002479 ORTHO05D002675 1.8e-23 114.4 128 50.0
Lju1074C3T5 Lonicera japonica HOM05D002479 ORTHO05D002675 3.1e-23 113.6 131 46.6
Oeu064217.1 Olea europaea HOM05D002479 ORTHO05D002675 3.1e-23 113.6 131 48.1
TWI09G1194 Tripterygium wilfordii HOM05D002479 ORTHO05D002675 3.1e-23 113.6 125 48.0
CSS0026566 Camellia sinensis var. sinensis HOM05D002479 ORTHO05D002675 4.1e-23 113.2 134 68.7
CSS0032076 Camellia sinensis var. sinensis HOM05D002479 ORTHO05D002675 4.1e-23 113.2 134 68.7
Thhalv10020060m.g Eutrema salsugineum HOM05D002479 ORTHO05D002675 4.1e-23 113.2 160 50.0
Nitab4.5_0001856g0030 Nicotiana tabacum HOM05D003117 ORTHO05D003612 4.1e-23 113.2 128 49.2
TAR365G0241 Trochodendron aralioides HOM05D002479 ORTHO05D002675 4.1e-23 113.2 129 46.5
TAR365G0877 Trochodendron aralioides HOM05D002479 ORTHO05D002675 4.1e-23 113.2 129 62.8
Dinv05730 Davidia involucrata HOM05D002479 ORTHO05D002675 5.3e-23 112.8 129 60.5
Lj1P569T5 Lonicera japonica HOM05D002479 ORTHO05D002675 5.3e-23 112.8 132 47.0
Eucgr.D00099 Eucalyptus grandis HOM05D002479 ORTHO05D002675 6.9e-23 112.5 125 48.8
vmacro20006 Vaccinium macrocarpon HOM05D002479 ORTHO05D002675 6.9e-23 112.5 199 38.2
Solyc09g083110.3 Solanum lycopersicum HOM05D002479 ORTHO05D002675 9.1e-23 112.1 128 47.7
Sopen09g031990 Solanum pennellii HOM05D002479 ORTHO05D002675 9.1e-23 112.1 128 47.7
PGSC0003DMG400006105 Solanum tuberosum HOM05D002479 ORTHO05D002675 9.1e-23 112.1 128 47.7
PGR004G1668 Punica granatum HOM05D002479 ORTHO05D002675 2.6e-22 110.5 126 47.6
MSTRG.24708 Avicennia marina HOM05D002479 ORTHO05D002675 4.5e-22 109.8 131 46.6
Peaxi162Scf00788g00034 Petunia axillaris HOM05D002479 ORTHO05D002675 1.0e-21 108.6 129 60.5
A05p25680 Brassica napus HOM05D002479 ORTHO05D002675 1.7e-21 107.8 164 53.0
Migut.N00231 Erythranthe guttata HOM05D002479 ORTHO05D002675 3.8e-21 106.7 127 44.1
Sed0003943 Sechium edule HOM05D002479 ORTHO05D002675 5.0e-21 106.3 131 67.2
Lalb_Chr01g0020831 Lupinus albus HOM05D002479 ORTHO05D002675 6.5e-21 105.9 122 45.1
Actinidia06778 Actinidia chinensis HOM05D002479 ORTHO05D002675 8.5e-21 105.5 128 40.6
Actinidia07831 Actinidia chinensis HOM05D002479 ORTHO05D002675 8.5e-21 105.5 128 40.6
Lsat_1_v5_gn_5_67920 Lactuca sativa HOM05D002479 ORTHO05D002675 8.5e-21 105.5 123 58.5
Lj6g0009664 Lotus japonicus HOM05D002479 ORTHO05D002675 8.5e-21 105.5 121 45.5
PSO528G0065 Papaver somniferum HOM05D002479 ORTHO05D002675 8.5e-21 105.5 130 50.0
Ah.06g188690 Amaranthus hybridus HOM05D002479 ORTHO05D002675 1.1e-20 105.1 131 50.4
Ah.13g068180 Amaranthus hybridus HOM05D002479 ORTHO05D002675 1.9e-20 104.4 121 52.1
CAN.G749.33 Capsicum annuum HOM05D002479 ORTHO05D002675 2.5e-20 104.0 128 59.4
ECA233G5632 Erigeron canadensis HOM05D003117 ORTHO05D003612 2.5e-20 104.0 123 59.3
TPR.G22484 Trifolium pratense HOM05D002479 ORTHO05D002675 2.5e-20 104.0 132 42.4
HanXRQChr06g0184931 Helianthus annuus HOM05D002479 ORTHO05D002675 3.2e-20 103.6 123 43.9
Lj5g0026763 Lotus japonicus HOM05D002479 ORTHO05D002675 5.5e-20 102.8 131 45.0
Phvul.006G222000 Phaseolus vulgaris HOM05D002479 ORTHO05D002675 5.5e-20 102.8 133 43.6
Sabra11G0052400 Salix brachista HOM05D000022 ORTHO05D000071 7.2e-20 102.4 64 76.6
VMungo0720G1484 Vigna mungo HOM05D002479 ORTHO05D002675 9.4e-20 102.1 128 42.2
Nn1g02530 Nelumbo nucifera HOM05D002479 ORTHO05D002675 1.2e-19 101.7 160 53.8
PSO170G3719 Papaver somniferum HOM05D002479 ORTHO05D002675 1.6e-19 101.3 130 40.0
AUR62006894 Chenopodium quinoa HOM05D002479 ORTHO05D002675 2.1e-19 100.9 135 58.5
CARHR098950 Cardamine hirsuta HOM05D002479 ORTHO05D002675 3.6e-19 100.1 128 64.1
Glyma.10G001500 Glycine max HOM05D002479 ORTHO05D002675 3.6e-19 100.1 115 45.2
Aqoxy2G03503 Aquilegia oxysepala HOM05D002479 ORTHO05D002675 1.0e-18 98.6 152 36.2
AUR62000543 Chenopodium quinoa HOM05D002479 ORTHO05D002675 1.0e-18 98.6 135 55.6
EL10Ac4g09674 Beta vulgaris HOM05D002479 ORTHO05D002675 1.4e-18 98.2 133 57.9
FvH4_4g02020 Fragaria vesca HOM05D002479 ORTHO05D002675 2.3e-18 97.4 128 66.4
Medtr1g040765 Medicago truncatula HOM05D002479 ORTHO05D002675 3.0e-18 97.1 128 40.6
MBI11_g15907_MAGBIO Magnolia biondii HOM05D002479 ORTHO05D002675 3.9e-18 96.7 159 36.5
HanXRQChr14g0428761 Helianthus annuus HOM05D002479 ORTHO05D002675 1.1e-17 95.1 123 58.5
Ca_10409_v3 Cicer arietinum L. HOM05D002479 ORTHO05D002675 1.5e-17 94.7 173 36.4
RcHm_v2.0_Chr4g0389071 Rosa chinensis HOM05D002479 ORTHO05D002675 1.5e-17 94.7 112 46.4
Cc03_g04610 Coffea canephora HOM05D002479 ORTHO05D002675 4.4e-17 93.2 116 67.2
AT3G23020 Arabidopsis thaliana HOM05D002479 ORTHO05D002675 9.7e-17 92.0 164 51.2
DCAR_005281 Daucus carota HOM05D002479 ORTHO05D002675 1.7e-16 91.3 130 39.2
arahy.Tifrunner.gnm1.ann1.13GU12 Arachis hypogaea HOM05D002479 ORTHO05D002675 2.2e-16 90.9 131 41.2
BcaC05g27986 Brassica carinata HOM05D002479 ORTHO05D002675 2.2e-16 90.9 83 53.0
C05p39950 Brassica napus HOM05D002479 ORTHO05D002675 2.2e-16 90.9 83 53.0
BolC5t32740H Brassica oleracea HOM05D002479 ORTHO05D002675 2.2e-16 90.9 83 53.0
SGA_v2.0_scaffold79G25620 Striga asiatica HOM05D002479 ORTHO05D002675 2.2e-16 90.9 125 41.6
Medtr1g090120 Medicago truncatula HOM05D002479 ORTHO05D002675 2.8e-16 90.5 134 41.0
Sp3g20700 Schrenkiella parvula HOM05D002479 ORTHO05D002675 4.8e-16 89.7 167 50.9
AL3G37450 Arabidopsis lyrata HOM05D002479 ORTHO05D002675 8.2e-16 89.0 164 51.2
Sc19g0003840 Simmondsia chinensis HOM05D002479 ORTHO05D002675 1.1e-15 88.6 133 57.9
TPR.G37719 Trifolium pratense HOM05D002479 ORTHO05D002675 3.1e-15 87.0 162 35.2
Ca_12209_v3 Cicer arietinum L. HOM05D002479 ORTHO05D002675 1.2e-14 85.1 133 49.6
Carub.0003s2318 Capsella rubella HOM05D002479 ORTHO05D002675 5.9e-14 82.8 132 58.3
AL57U10010 Arabidopsis lyrata HOM05D002479 ORTHO05D002675 1.7e-13 81.3 132 58.3
arahy.Tifrunner.gnm1.ann1.CUF5YV Arachis hypogaea HOM05D002479 ORTHO05D002675 2.2e-13 80.9 153 35.3
Psat6g170520 Pisum sativum HOM05D002479 ORTHO05D002675 8.5e-13 79.0 132 59.1
MELO3C014273.2 Cucumis melo HOM05D002479 ORTHO05D002675 1.1e-12 78.6 132 59.8
AL3G37420 Arabidopsis lyrata HOM05D002479 ORTHO05D002675 2.5e-12 77.4 53 71.7
CsaV3_4G030850 Cucumis sativus L. HOM05D002479 ORTHO05D002675 5.5e-12 76.3 127 59.8
TPR.G39814 Trifolium pratense HOM05D002479 ORTHO05D002675 7.2e-12 75.9 50 72.0
ClCG01G020210 Citrullus lanatus HOM05D002479 ORTHO05D002675 9.4e-12 75.5 132 58.3
HPP92_006127 Vanilla planifolia HOM05D002479 ORTHO05D002675 8.0e-11 72.4 127 50.4
Lalb_Chr21g0312681 Lupinus albus HOM05D002479 ORTHO05D002675 3.9e-10 70.1 49 69.4
ATR0665G174 Amborella trichopoda HOM05D002479 ORTHO05D002675 6.7e-10 69.3 49 63.3
Medtr1g040725 Medicago truncatula HOM05D003117 ORTHO05D003612 2.0e-09 67.8 76 48.7
Medtr5g042370 Medicago truncatula HOM05D002479 ORTHO05D002675 2.0e-09 67.8 76 48.7
Zm00001eb004770 Zea mays HOM05D002479 ORTHO05D002675 3.3e-09 67.0 141 29.8
Aa31LG8G9510 Aethionema arabicum HOM05D002479 ORTHO05D002675 4.4e-09 66.6 126 56.3
SEGI_41252 Sequoiadendron giganteum HOM05D002479 ORTHO05D002675 2.8e-08 63.9 97 35.1
arahy.Tifrunner.gnm1.ann1.4S02NL Arachis hypogaea HOM05D000001 ORTHO05D009083 1.1e-07 62.0 50 62.0
Os03g0162900 Oryza sativa ssp. japonica HOM05D002479 ORTHO05D002675 1.8e-07 61.2 116 31.0
Sabra19G0071000 Salix brachista HOM05D000002 ORTHO05D010776 1.6e-06 58.2 45 64.4
Zm00001eb315460 Zea mays HOM05D003689 ORTHO05D003950 3.5e-06 57.0 126 27.8
Psat7g237360 Pisum sativum HOM05D002479 ORTHO05D002675 4.5e-06 56.6 205 24.4


User provided reference genes

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