Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0043200 Salix brachista HOM05D009213 ORTHO05D010313 2.3e-145 518.8 260 100.0
Sabra19G0046300 Salix brachista HOM05D003265 ORTHO05D010313 1.1e-105 387.1 241 85.9
Sabra19G0043100 Salix brachista HOM05D003265 ORTHO05D010313 1.4e-105 386.7 241 85.5
Sabra05G0023700 Salix brachista HOM05D003265 ORTHO05D003819 2.2e-42 176.8 112 85.7
Potri.016G085600 Populus trichocarpa HOM05D003265 ORTHO05D003819 2.4e-41 173.3 151 68.9
Sabra16G0092200 Salix brachista HOM05D003265 ORTHO05D003819 1.5e-38 164.1 137 72.3
Potri.019G000657 Populus trichocarpa HOM05D009213 ORTHO05D010313 9.2e-25 118.2 96 63.5
Sabra19G0043400 Salix brachista HOM05D009213 ORTHO05D010313 9.2e-25 118.2 83 72.3
Sabra19G0046600 Salix brachista HOM05D009213 ORTHO05D010313 9.2e-25 118.2 83 72.3
Sabra19G0046000 Salix brachista HOM05D009213 ORTHO05D010313 2.7e-24 116.7 82 70.7
Sabra19G0046100 Salix brachista HOM05D009213 ORTHO05D010313 2.7e-24 116.7 82 70.7
Potri.T005501 Populus trichocarpa HOM05D000005 ORTHO05D000012 7.8e-24 115.2 70 77.1
Sabra19G0045800 Salix brachista HOM05D009213 ORTHO05D010313 1.0e-23 114.8 81 71.6
Potri.019G002628 Populus trichocarpa HOM05D009213 ORTHO05D010313 1.7e-23 114.0 70 78.6
Sabra19G0043300 Salix brachista HOM05D009213 ORTHO05D010313 2.9e-23 113.2 82 70.7
Sabra06G0103300 Salix brachista HOM05D003265 ORTHO05D003819 5.0e-23 112.5 145 53.1
Sabra19G0046500 Salix brachista HOM05D009213 ORTHO05D010313 1.1e-22 111.3 72 77.8
Sabra19G0007400 Salix brachista HOM05D009213 ORTHO05D010313 7.3e-22 108.6 79 70.9
Sabra19G0008300 Salix brachista HOM05D009213 ORTHO05D010313 7.3e-22 108.6 68 80.9
Sabra19G0003200 Salix brachista HOM05D009213 ORTHO05D010313 2.1e-21 107.1 79 70.9
Sabra17G0065700 Salix brachista HOM05D009213 ORTHO05D010313 8.0e-21 105.1 83 67.5
Sabra19G0007100 Salix brachista HOM05D009213 ORTHO05D010313 8.0e-21 105.1 83 66.3
Potri.019G003942 Populus trichocarpa HOM05D000005 ORTHO05D000012 1.0e-20 104.8 70 72.9
Sabra19G0046200 Salix brachista HOM05D009213 ORTHO05D010313 1.8e-20 104.0 83 66.3
Sabra19G0053100 Salix brachista HOM05D009213 ORTHO05D010313 1.8e-20 104.0 94 59.6
Sabra19G0008400 Salix brachista HOM05D009213 ORTHO05D010313 2.3e-20 103.6 95 60.0
Sabra19G0008700 Salix brachista HOM05D009213 ORTHO05D010313 2.3e-20 103.6 67 80.6
Sabra19G0009000 Salix brachista HOM05D009213 ORTHO05D010313 2.3e-20 103.6 98 58.2
Sabra19G0045600 Salix brachista HOM05D009213 ORTHO05D010313 2.3e-20 103.6 72 79.2
Sabra19G0052700 Salix brachista HOM05D009213 ORTHO05D010313 2.3e-20 103.6 79 68.4
Potri.006G131650 Populus trichocarpa HOM05D003265 ORTHO05D003819 1.5e-19 100.9 156 48.7
Sabra19G0046800 Salix brachista HOM05D009213 ORTHO05D010313 2.0e-19 100.5 76 65.8
Potri.019G003285 Populus trichocarpa HOM05D000005 ORTHO05D000012 5.8e-19 99.0 102 52.9
Sabra19G0008800 Salix brachista HOM05D009213 ORTHO05D010313 9.2e-17 91.7 68 70.6
Sabra19G0007600 Salix brachista HOM05D009213 ORTHO05D010313 6.6e-15 85.5 71 67.6
Sabra19G0008500 Salix brachista HOM05D009213 ORTHO05D010313 8.0e-13 78.6 88 51.1
Sabra19G0007800 Salix brachista HOM05D009213 ORTHO05D010313 1.1e-12 78.2 64 70.3
Sabra19G0008100 Salix brachista HOM05D009213 ORTHO05D010313 1.1e-12 78.2 64 70.3
Sabra19G0007000 Salix brachista HOM05D009213 ORTHO05D010313 1.4e-12 77.8 65 66.2
Sabra19G0045500 Salix brachista HOM05D009213 ORTHO05D010313 5.2e-12 75.9 73 60.3
DCAR_017729 Daucus carota HOM05D003265 ORTHO05D003819 5.8e-11 72.4 87 51.7
Ciclev10011133m.g Citrus clementina HOM05D003265 ORTHO05D003819 7.5e-11 72.0 123 40.7
Dinv37252 Davidia involucrata HOM05D003265 ORTHO05D003819 7.5e-11 72.0 69 58.0
Sabra17G0065500 Salix brachista HOM05D009213 ORTHO05D010313 1.7e-10 70.9 79 49.4
Hund20166 Selenicereus undatus HOM05D003265 ORTHO05D003819 2.2e-10 70.5 68 58.8
Sabra19G0045700 Salix brachista HOM05D009213 ORTHO05D010313 2.9e-10 70.1 37 89.2
Prupe.6G241300 Prunus persica HOM05D003265 ORTHO05D003819 4.9e-10 69.3 69 58.0
CSS0020316 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 6.4e-10 68.9 62 56.5
Haze_20650 Corylus avellana HOM05D003265 ORTHO05D003819 8.3e-10 68.6 78 52.6
Atru.chr8.2556 Acer truncatum HOM05D003265 ORTHO05D003819 1.1e-09 68.2 57 64.9
Cfa017508 Carpinus fangiana HOM05D003265 ORTHO05D003819 1.1e-09 68.2 166 35.5
Hma1.2p1_0111F.1_g053890 Hydrangea macrophylla HOM05D003265 ORTHO05D003819 1.9e-09 67.4 81 50.6
TWI74G1096 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 1.9e-09 67.4 98 44.9
Nitab4.5_0001142g0090 Nicotiana tabacum HOM05D000855 ORTHO05D002321 2.4e-09 67.0 63 61.9
Thecc.05G053900 Theobroma cacao HOM05D003265 ORTHO05D003819 2.4e-09 67.0 87 44.8
Rhsim04G0151400 Rhododendron simsii HOM05D003265 ORTHO05D003819 3.2e-09 66.6 79 50.6
TWI77G0315 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 4.1e-09 66.2 86 46.5
MSTRG.26726 Avicennia marina HOM05D003265 ORTHO05D003819 5.4e-09 65.9 70 58.6
Oeu026065.2 Olea europaea HOM05D003265 ORTHO05D003819 9.2e-09 65.1 73 54.8
vmacro20061 Vaccinium macrocarpon HOM05D003265 ORTHO05D003819 9.2e-09 65.1 71 52.1
EL10Ac7g17351 Beta vulgaris HOM05D003265 ORTHO05D003819 1.2e-08 64.7 65 60.0
Eucgr.A01175 Eucalyptus grandis HOM05D003265 ORTHO05D003819 1.2e-08 64.7 80 46.2
Peaxi162Scf00005g04612 Petunia axillaris HOM05D003265 ORTHO05D003819 1.2e-08 64.7 107 41.1
Actinidia13106 Actinidia chinensis HOM05D003265 ORTHO05D003819 1.6e-08 64.3 58 63.8
COL.COLO4_27082 Corchorus olitorius HOM05D003265 ORTHO05D003819 2.1e-08 63.9 82 47.6
Nitab4.5_0003895g0030 Nicotiana tabacum HOM05D000855 ORTHO05D002321 2.1e-08 63.9 63 58.7
Migut.L01659 Erythranthe guttata HOM05D003265 ORTHO05D003819 2.7e-08 63.5 195 30.8
HanXRQChr01g0027471 Helianthus annuus HOM05D003265 ORTHO05D003819 3.5e-08 63.2 75 52.0
MD04G1104400 Malus domestica HOM05D003265 ORTHO05D003819 3.5e-08 63.2 67 53.7
RhsimUnG0118100 Rhododendron simsii HOM05D003265 ORTHO05D003819 3.5e-08 63.2 44 70.5
Aqoxy3G02606 Aquilegia oxysepala HOM05D003265 ORTHO05D003819 4.6e-08 62.8 68 55.9
AUR62042920 Chenopodium quinoa HOM05D003265 ORTHO05D003819 4.6e-08 62.8 52 69.2
ECA248G3421 Erigeron canadensis HOM05D002706 ORTHO05D003253 6.0e-08 62.4 71 53.5
Manes.08G003400 Manihot esculenta HOM05D003265 ORTHO05D003819 6.0e-08 62.4 54 64.8
QL07p045275 Quercus lobata HOM05D003265 ORTHO05D003819 7.8e-08 62.0 81 50.6
FAN05G5023 Fragaria x ananassa HOM05D003265 ORTHO05D003819 1.3e-07 61.2 72 51.4
FAN05G5644 Fragaria x ananassa HOM05D003265 ORTHO05D003819 1.3e-07 61.2 72 51.4
FAN14G0893 Fragaria x ananassa HOM05D000009 ORTHO05D003819 1.3e-07 61.2 72 51.4
MD12G1124300 Malus domestica HOM05D003265 ORTHO05D003819 1.3e-07 61.2 76 52.6
Solyc09g007340.4 Solanum lycopersicum HOM05D000855 ORTHO05D002321 1.3e-07 61.2 77 46.8
Sopen09g002240 Solanum pennellii HOM05D003265 ORTHO05D003819 1.3e-07 61.2 66 51.5
PGSC0003DMG400001737 Solanum tuberosum HOM05D003265 ORTHO05D003819 1.3e-07 61.2 86 45.3
FAN09G0144 Fragaria x ananassa HOM05D003265 ORTHO05D003819 1.7e-07 60.8 72 51.4
Cc06_g03550 Coffea canephora HOM05D003265 ORTHO05D003819 2.3e-07 60.5 82 46.3
Sc20g0004060 Simmondsia chinensis HOM05D003265 ORTHO05D003819 2.3e-07 60.5 63 57.1
DCAR_014962 Daucus carota HOM05D003265 ORTHO05D003819 3.0e-07 60.1 73 50.7
SGA_v2.0_scaffold94G28667 Striga asiatica HOM05D003265 ORTHO05D003819 3.0e-07 60.1 82 48.8
Ah.15g092100 Amaranthus hybridus HOM05D003265 ORTHO05D003819 3.9e-07 59.7 66 62.1
Gohir.A01G217200 Gossypium hirsutum HOM05D003265 ORTHO05D003819 5.0e-07 59.3 70 50.0
Gohir.D01G205900 Gossypium hirsutum HOM05D003265 ORTHO05D003819 5.0e-07 59.3 82 46.3
Gorai.002G250300 Gossypium raimondii HOM05D003265 ORTHO05D003819 5.0e-07 59.3 82 46.3
Duzib106G1383 Durio zibethinus HOM05D003265 ORTHO05D003819 6.6e-07 58.9 70 48.6
FvH4_6g15330 Fragaria vesca HOM05D003265 ORTHO05D003819 8.6e-07 58.5 72 50.0
HanXRQChr11g0350071 Helianthus annuus HOM05D003265 ORTHO05D003819 8.6e-07 58.5 94 41.5
RcHm_v2.0_Chr3g0468801 Rosa chinensis HOM05D003265 ORTHO05D003819 8.6e-07 58.5 76 50.0
AUR62040021 Chenopodium quinoa HOM05D003265 ORTHO05D003819 1.1e-06 58.2 47 70.2
SGA_v2.0_scaffold35G14161 Striga asiatica HOM05D003265 ORTHO05D003819 1.1e-06 58.2 83 48.2
Sabra19G0007300 Salix brachista HOM05D009213 ORTHO05D010313 1.5e-06 57.8 55 56.4
Duzib128G1251 Durio zibethinus HOM05D003265 ORTHO05D003819 2.5e-06 57.0 87 41.4
CiPaw.10G137500 Carya illinoinensis HOM05D003265 ORTHO05D003819 3.3e-06 56.6 81 45.7
Nn2g12994 Nelumbo nucifera HOM05D003265 ORTHO05D003819 3.3e-06 56.6 64 53.1
Lsat_1_v5_gn_1_53881 Lactuca sativa HOM05D003265 ORTHO05D003819 4.3e-06 56.2 69 49.3
unitig_746.g26760 Utricularia gibba HOM05D003265 ORTHO05D003819 4.3e-06 56.2 59 59.3
Nn2g10657 Nelumbo nucifera HOM05D003265 ORTHO05D003819 5.6e-06 55.8 74 51.4
GSVIVG01025624001 Vitis vinifera HOM05D000855 ORTHO05D002321 9.5e-06 55.1 55 58.2


User provided reference genes

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