Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0026400 Salix brachista HOM05D011447 ORTHO05D010069 1.7e-52 209.1 109 100.0
Sabra19G0016700 Salix brachista HOM05D011447 ORTHO05D010069 4.1e-51 204.5 109 98.2
Sabra19G0016900 Salix brachista HOM05D011447 ORTHO05D010069 8.8e-38 160.2 91 92.3
Sabra19G0026300 Salix brachista HOM05D011447 ORTHO05D010069 8.8e-38 160.2 91 92.3
Potri.019G013300 Populus trichocarpa HOM05D011447 ORTHO05D010069 8.2e-36 153.7 91 89.0
Sabra19G0016800 Salix brachista HOM05D001365 ORTHO05D010069 1.8e-35 152.5 83 96.4
Potri.019G013750 Populus trichocarpa HOM05D011447 ORTHO05D010069 2.9e-33 145.2 92 87.0
Potri.016G093900 Populus trichocarpa HOM05D011447 ORTHO05D010069 1.2e-21 106.7 94 66.0
Potri.013G043800 Populus trichocarpa HOM05D011447 ORTHO05D010069 5.7e-21 104.4 94 64.9
Sabra13G0040600 Salix brachista HOM05D011447 ORTHO05D010069 7.5e-21 104.0 81 66.7
Manes.08G137000 Manihot esculenta HOM05D011447 ORTHO05D010069 4.0e-14 81.6 78 60.3
Manes.08G137100 Manihot esculenta HOM05D011447 ORTHO05D010069 1.9e-11 72.8 56 66.1
Manes.09G150100 Manihot esculenta HOM05D011447 ORTHO05D010069 7.8e-10 67.4 115 44.3
QL03p028359 Quercus lobata HOM05D009218 ORTHO05D010069 5.0e-09 64.7 92 44.6
QL03p029061 Quercus lobata HOM05D009218 ORTHO05D010069 5.0e-09 64.7 92 44.6
QL03p028391 Quercus lobata HOM05D011447 ORTHO05D010069 6.6e-09 64.3 70 52.9
QL03p029028 Quercus lobata HOM05D011447 ORTHO05D010069 6.6e-09 64.3 70 52.9
PGR004G0279 Punica granatum HOM05D011447 ORTHO05D010069 4.3e-08 61.6 63 55.6
Cpa.g.sc162.8 Carica papaya HOM05D009218 ORTHO05D010069 5.6e-08 61.2 52 59.6
Sc20g0000500 Simmondsia chinensis HOM05D009218 ORTHO05D010069 7.3e-08 60.8 73 49.3
Gorai.013G186400 Gossypium raimondii HOM05D009218 ORTHO05D010069 2.1e-07 59.3 46 67.4
TAR623G1017 Trochodendron aralioides HOM05D002974 ORTHO05D002992 2.8e-07 58.9 79 45.6
Nn7g36749 Nelumbo nucifera HOM05D002974 ORTHO05D002992 4.7e-07 58.2 66 50.0
CiPaw.07G070200 Carya illinoinensis HOM05D009218 ORTHO05D010069 6.2e-07 57.8 41 68.3
Cc06_g19310 Coffea canephora HOM05D002974 ORTHO05D002992 6.2e-07 57.8 51 60.8
COL.COLO4_15410 Corchorus olitorius HOM05D009218 ORTHO05D010069 8.0e-07 57.4 99 37.4
CsaV3_2G003860 Cucumis sativus L. HOM05D009218 ORTHO05D010069 8.0e-07 57.4 76 42.1
Dinv05728 Davidia involucrata HOM05D009218 ORTHO05D010069 1.1e-06 57.0 96 36.5
Gohir.A13G168950 Gossypium hirsutum HOM05D009218 ORTHO05D010069 1.1e-06 57.0 46 63.0
Ciclev10022688m.g Citrus clementina HOM05D009218 ORTHO05D010069 1.4e-06 56.6 57 52.6
MELO3C004409.2 Cucumis melo HOM05D009218 ORTHO05D010069 1.4e-06 56.6 85 43.5
Rhsim05G0175900 Rhododendron simsii HOM05D009218 ORTHO05D010069 1.4e-06 56.6 44 63.6
SHI31328 Sapria himalayana HOM05D011447 ORTHO05D010069 1.4e-06 56.6 87 46.0
CAN.G1465.2 Capsicum annuum HOM05D011340 ORTHO05D010069 1.8e-06 56.2 51 64.7
Nn3g19575 Nelumbo nucifera HOM05D011447 ORTHO05D010069 1.8e-06 56.2 69 47.8
Duzib106G0159 Durio zibethinus HOM05D002974 ORTHO05D002992 2.3e-06 55.8 76 39.5
Medtr3g013980 Medicago truncatula HOM05D002974 ORTHO05D002992 2.3e-06 55.8 50 62.0
Thecc.05G277300 Theobroma cacao HOM05D009218 ORTHO05D010069 2.3e-06 55.8 49 59.2
ClCG02G016910 Citrullus lanatus HOM05D009218 ORTHO05D010069 3.1e-06 55.5 55 50.9
Gohir.D13G174325 Gossypium hirsutum HOM05D009218 ORTHO05D010069 3.1e-06 55.5 46 65.2
Atru.chr2.882 Acer truncatum HOM05D009218 ORTHO05D010069 4.0e-06 55.1 59 52.5
Nn2g14777 Nelumbo nucifera HOM05D002974 ORTHO05D002992 4.0e-06 55.1 67 49.3
Nitab4.5_0000930g0050 Nicotiana tabacum HOM05D011340 ORTHO05D010069 4.0e-06 55.1 48 58.3
Nitab4.5_0022515g0010 Nicotiana tabacum HOM05D011340 ORTHO05D010069 4.0e-06 55.1 58 55.2
PGSC0003DMG400023543 Solanum tuberosum HOM05D011340 ORTHO05D010069 4.0e-06 55.1 49 63.3
Eucgr.A02242 Eucalyptus grandis HOM05D002974 ORTHO05D002992 5.2e-06 54.7 69 47.8
Eucgr.H04261 Eucalyptus grandis HOM05D009218 ORTHO05D010069 5.2e-06 54.7 48 64.6
Nitab4.5_0000930g0040 Nicotiana tabacum HOM05D011340 ORTHO05D010069 5.2e-06 54.7 58 55.2
Nitab4.5_0009599g0020 Nicotiana tabacum HOM05D011340 ORTHO05D010069 5.2e-06 54.7 38 68.4
RcHm_v2.0_Chr3g0450331 Rosa chinensis HOM05D009218 ORTHO05D010069 5.2e-06 54.7 69 49.3
TPR.G31150 Trifolium pratense HOM05D002974 ORTHO05D002992 5.2e-06 54.7 50 60.0
CiPaw.07G070100 Carya illinoinensis HOM05D009218 ORTHO05D010069 6.8e-06 54.3 86 47.7
Sed0020224 Sechium edule HOM05D009218 ORTHO05D010069 6.8e-06 54.3 48 56.2
Sed0021944 Sechium edule HOM05D009218 ORTHO05D010069 6.8e-06 54.3 76 44.7
Aqoxy2G00396 Aquilegia oxysepala HOM05D002974 ORTHO05D002992 8.9e-06 53.9 51 56.9


User provided reference genes

Program Settings