Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0018800 Salix brachista HOM05D006880 ORTHO05D008638 1.9e-107 392.5 195 100.0
Sabra19G0023300 Salix brachista HOM05D006880 ORTHO05D008638 5.1e-105 384.4 195 98.5
Potri.019G006500 Populus trichocarpa HOM05D006880 ORTHO05D008638 3.1e-102 375.2 196 95.9
Sabra16G0194800 Salix brachista HOM05D006880 ORTHO05D008638 5.3e-94 347.8 199 89.4
Potri.001G309000 Populus trichocarpa HOM05D006880 ORTHO05D008638 3.2e-91 338.6 201 86.6
Manes.12G148400 Manihot esculenta HOM05D006880 ORTHO05D008638 1.3e-84 316.6 204 79.9
TWI79G0189 Tripterygium wilfordii HOM05D006880 ORTHO05D008638 1.5e-83 313.2 195 81.0
Prupe.6G162500 Prunus persica HOM05D006880 ORTHO05D008638 6.8e-81 304.3 195 80.5
QL06p051802 Quercus lobata HOM05D006880 ORTHO05D008638 6.8e-81 304.3 194 78.9
Atru.chr4.544 Acer truncatum HOM05D006880 ORTHO05D008638 8.8e-81 303.9 199 78.4
RcHm_v2.0_Chr2g0119191 Rosa chinensis HOM05D006880 ORTHO05D008638 9.8e-80 300.4 195 77.4
Gohir.A10G083300 Gossypium hirsutum HOM05D006880 ORTHO05D008638 2.2e-79 299.3 195 79.0
Gohir.D10G105600 Gossypium hirsutum HOM05D006880 ORTHO05D008638 2.2e-79 299.3 195 79.0
Duzib187G0911 Durio zibethinus HOM05D006880 ORTHO05D008638 4.8e-79 298.1 197 79.2
Gorai.011G115200 Gossypium raimondii HOM05D006880 ORTHO05D008638 4.8e-79 298.1 195 79.0
Psat5g063920 Pisum sativum HOM05D006880 ORTHO05D008638 4.8e-79 298.1 198 76.8
FAN23G3120 Fragaria x ananassa HOM05D006880 ORTHO05D008638 8.3e-79 297.4 195 76.9
FvH4_1g23610 Fragaria vesca HOM05D006880 ORTHO05D008638 1.1e-78 297.0 195 76.9
FAN28G1236 Fragaria x ananassa HOM05D006880 ORTHO05D008638 1.1e-78 297.0 195 76.9
FAN19G0460 Fragaria x ananassa HOM05D006880 ORTHO05D008638 1.4e-78 296.6 195 76.9
CANSAT01G0776 Cannabis sativa HOM05D006880 ORTHO05D008638 1.8e-78 296.2 197 77.7
FAN26G3452 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.4e-78 295.8 195 76.9
Duzib147G0678 Durio zibethinus HOM05D006880 ORTHO05D008638 4.1e-78 295.0 199 77.4
Thecc.01G120600 Theobroma cacao HOM05D006880 ORTHO05D008638 4.1e-78 295.0 200 77.5
Cpa.g.sc453.1 Carica papaya HOM05D006880 ORTHO05D008638 7.0e-78 294.3 201 75.1
Gorai.002G151100 Gossypium raimondii HOM05D006880 ORTHO05D008638 7.0e-78 294.3 197 77.7
Lalb_Chr08g0238661 Lupinus albus HOM05D006880 ORTHO05D008638 9.1e-78 293.9 195 77.9
TPR.G18722 Trifolium pratense HOM05D006880 ORTHO05D008638 1.6e-77 293.1 197 76.6
COL.COLO4_22415 Corchorus olitorius HOM05D006880 ORTHO05D008638 2.7e-77 292.4 200 76.5
Ciclev10026534m.g Citrus clementina HOM05D006880 ORTHO05D008638 3.5e-77 292.0 199 76.4
CiPaw.03G123600 Carya illinoinensis HOM05D006880 ORTHO05D008638 4.5e-77 291.6 203 74.9
Glyma.06G149800 Glycine max HOM05D006880 ORTHO05D008638 4.5e-77 291.6 195 76.4
Phvul.009G147400 Phaseolus vulgaris HOM05D006880 ORTHO05D008638 4.5e-77 291.6 202 73.8
Glyma.09G116700 Glycine max HOM05D006880 ORTHO05D008638 5.9e-77 291.2 195 76.4
Lalb_Chr11g0068241 Lupinus albus HOM05D006880 ORTHO05D008638 1.3e-76 290.0 197 76.1
Ca_16914_v3 Cicer arietinum L. HOM05D006880 ORTHO05D008638 2.3e-76 289.3 196 76.0
Medtr3g095480 Medicago truncatula HOM05D006880 ORTHO05D008638 2.3e-76 289.3 199 74.9
CiPaw.04G083800 Carya illinoinensis HOM05D006880 ORTHO05D008638 8.6e-76 287.3 198 73.7
Lj1g0010031 Lotus japonicus HOM05D006880 ORTHO05D008638 8.6e-76 287.3 195 73.8
Oeu054906.1 Olea europaea HOM05D006880 ORTHO05D008638 4.2e-75 285.0 202 74.3
ClCG01G015680 Citrullus lanatus HOM05D006880 ORTHO05D008638 3.6e-74 282.0 193 75.1
Glyma.09G116500 Glycine max HOM05D006880 ORTHO05D008638 4.7e-74 281.6 196 74.5
arahy.Tifrunner.gnm1.ann1.91R8ME Arachis hypogaea HOM05D006880 ORTHO05D008638 5.2e-73 278.1 196 74.5
Solyc11g005390.3 Solanum lycopersicum HOM05D006880 ORTHO05D008638 5.2e-73 278.1 199 75.9
Sopen11g001400 Solanum pennellii HOM05D006880 ORTHO05D008638 5.2e-73 278.1 199 75.9
SGA_v2.0_scaffold178G39501 Striga asiatica HOM05D006880 ORTHO05D008638 2.0e-72 276.2 207 72.0
Migut.H01108 Erythranthe guttata HOM05D006880 ORTHO05D008638 2.6e-72 275.8 203 70.9
Cc07_g17330 Coffea canephora HOM05D006880 ORTHO05D008638 3.4e-72 275.4 196 71.4
PSO675G8574 Papaver somniferum HOM05D006880 ORTHO05D008638 7.5e-72 274.2 195 71.8
PGSC0003DMG400003965 Solanum tuberosum HOM05D006880 ORTHO05D008638 9.8e-72 273.9 191 76.4
TAR628G0678 Trochodendron aralioides HOM05D006880 ORTHO05D008638 9.8e-72 273.9 198 71.2
MELO3C008029.2 Cucumis melo HOM05D006880 ORTHO05D008638 2.8e-71 272.3 193 74.1
PSO541G1054 Papaver somniferum HOM05D006880 ORTHO05D008638 3.7e-71 271.9 195 71.3
HanXRQChr02g0039401 Helianthus annuus HOM05D006880 ORTHO05D008638 4.9e-71 271.6 199 70.4
arahy.Tifrunner.gnm1.ann1.546D2B Arachis hypogaea HOM05D006880 ORTHO05D008638 8.3e-71 270.8 196 73.5
MD01G1016600 Malus domestica HOM05D006880 ORTHO05D008638 8.3e-71 270.8 200 72.5
ECA247G1470 Erigeron canadensis HOM05D006880 ORTHO05D008638 1.1e-70 270.4 195 70.8
Hma1.2p1_0006F.1_g004965 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 1.1e-70 270.4 200 72.0
Hma1.2p1_0025F.1_g016260 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 1.1e-70 270.4 200 72.0
Hma1.2p1_1667F.1_g296585 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 1.1e-70 270.4 200 72.0
C05p46720 Brassica napus HOM05D006880 ORTHO05D008638 1.4e-70 270.0 201 71.6
Sp3g16890 Schrenkiella parvula HOM05D006880 ORTHO05D008638 1.4e-70 270.0 205 68.8
Aa31LG8G5640 Aethionema arabicum HOM05D006880 ORTHO05D008638 1.8e-70 269.6 201 72.1
Aqoxy5G02095 Aquilegia oxysepala HOM05D006880 ORTHO05D008638 1.8e-70 269.6 187 73.3
BcaC02g12236 Brassica carinata HOM05D006880 ORTHO05D008638 1.8e-70 269.6 201 71.6
BcaC05g28570 Brassica carinata HOM05D006880 ORTHO05D008638 1.8e-70 269.6 201 71.6
BolC5t33399H Brassica oleracea HOM05D006880 ORTHO05D008638 1.8e-70 269.6 201 71.6
Actinidia06675 Actinidia chinensis HOM05D006880 ORTHO05D008638 3.1e-70 268.9 197 70.6
Nn1g06089 Nelumbo nucifera HOM05D006880 ORTHO05D008638 5.4e-70 268.1 195 71.3
Lj2A591T43 Lonicera japonica HOM05D006880 ORTHO05D008638 9.2e-70 267.3 196 69.4
AL3G32180 Arabidopsis lyrata HOM05D006880 ORTHO05D008638 2.7e-69 265.8 198 71.2
CSS0034618 Camellia sinensis var. sinensis HOM05D006880 ORTHO05D008638 3.5e-69 265.4 216 69.0
Sp1g36150 Schrenkiella parvula HOM05D006880 ORTHO05D008638 4.5e-69 265.0 200 71.0
A05p30800 Brassica napus HOM05D006880 ORTHO05D008638 5.9e-69 264.6 204 70.1
BraA05t21922Z Brassica rapa HOM05D006880 ORTHO05D008638 5.9e-69 264.6 204 70.1
Carub.0003s1862 Capsella rubella HOM05D006880 ORTHO05D008638 5.9e-69 264.6 198 70.7
THA.LOC104821864 Tarenaya hassleriana HOM05D006880 ORTHO05D008638 7.8e-69 264.2 182 73.1
BcaB06g25933 Brassica carinata HOM05D006880 ORTHO05D008638 1.3e-68 263.5 202 69.3
AT3G18800 Arabidopsis thaliana HOM05D006880 ORTHO05D008638 2.3e-68 262.7 198 70.7
PGR119G1657 Punica granatum HOM05D006880 ORTHO05D008638 2.3e-68 262.7 197 70.1
GSVIVG01026589001 Vitis vinifera HOM05D006880 ORTHO05D008638 3.8e-68 261.9 173 75.1
AUR62017937 Chenopodium quinoa HOM05D006880 ORTHO05D008638 3.3e-67 258.8 205 67.3
CARHR094210 Cardamine hirsuta HOM05D006880 ORTHO05D008638 4.3e-67 258.5 204 69.1
CDE08G0745 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 1.6e-66 256.5 195 69.7
MBI02_g23402_MAGBIO Magnolia biondii HOM05D006880 ORTHO05D008638 1.8e-65 253.1 181 69.6
Sed0021560 Sechium edule HOM05D006880 ORTHO05D008638 3.0e-65 252.3 193 67.9
Gohir.D11G233000 Gossypium hirsutum HOM05D006880 ORTHO05D008638 4.0e-65 251.9 199 69.3
Sc03g0004730 Simmondsia chinensis HOM05D006880 ORTHO05D008638 1.2e-64 250.4 182 69.8
ATR0772G040 Amborella trichopoda HOM05D006880 ORTHO05D008638 3.4e-64 248.8 196 65.8
Thhalv10022284m.g Eutrema salsugineum HOM05D006880 ORTHO05D008638 3.4e-64 248.8 204 65.7
HanXRQChr05g0137731 Helianthus annuus HOM05D006880 ORTHO05D008638 1.3e-63 246.9 198 66.7
HPP92_025026 Vanilla planifolia HOM05D006880 ORTHO05D008638 1.6e-61 240.0 188 67.0
HPP92_025033 Vanilla planifolia HOM05D006880 ORTHO05D008638 1.6e-61 240.0 188 67.0
Nn5g28731 Nelumbo nucifera HOM05D006880 ORTHO05D008638 7.5e-56 221.1 184 60.3
Peaxi162Scf00025g02313 Petunia axillaris HOM05D006880 ORTHO05D008638 2.2e-55 219.5 174 67.2
CsaV3_6G041940 Cucumis sativus L. HOM05D006880 ORTHO05D008638 2.9e-55 219.2 167 70.1
BcaC07g37070 Brassica carinata HOM05D006880 ORTHO05D008638 6.4e-55 218.0 199 62.3
Dinv09943 Davidia involucrata HOM05D006880 ORTHO05D008638 1.4e-54 216.9 174 66.7
CDE06G1704 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 2.0e-53 213.0 162 68.5
A08p04110 Brassica napus HOM05D006880 ORTHO05D008638 1.2e-48 197.2 145 70.3
Mapoly0012s0135 Marchantia polymorpha HOM05D006880 ORTHO05D008638 1.9e-46 189.9 181 54.1
SMO351G0309 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 5.6e-43 178.3 189 49.2
SMO196G0105 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 1.3e-39 167.2 180 47.2
AagrBONN_evm.TU.Sc2ySwM_228.250 Anthoceros agrestis HOM05D006880 ORTHO05D008638 3.2e-38 162.5 179 46.9
DCAR_016722 Daucus carota HOM05D006880 ORTHO05D008638 2.7e-37 159.5 105 75.2
Nn3g21133 Nelumbo nucifera HOM05D006880 ORTHO05D008638 3.0e-36 156.0 184 47.8
Nitab4.5_0023130g0010 Nicotiana tabacum HOM05D006880 ORTHO05D008638 3.0e-36 156.0 113 69.0
Nitab4.5_0011433g0020 Nicotiana tabacum HOM05D006880 ORTHO05D008638 5.1e-36 155.2 113 69.0
Nn8g40983 Nelumbo nucifera HOM05D006880 ORTHO05D008638 5.4e-30 135.2 182 44.0
Os04g0687200 Oryza sativa ssp. japonica HOM05D006880 ORTHO05D008638 3.9e-28 129.0 121 56.2
Eucgr.B01306 Eucalyptus grandis HOM05D006880 ORTHO05D008638 1.3e-23 114.0 131 48.9
Lj6g0028046 Lotus japonicus HOM05D006880 ORTHO05D008638 3.1e-17 92.8 75 61.3
BraA08t32436Z Brassica rapa HOM05D006880 ORTHO05D008638 4.6e-13 79.0 57 73.7
Nn3g19205 Nelumbo nucifera HOM05D006880 ORTHO05D008638 6.7e-12 75.1 70 54.3
Eucgr.B00961 Eucalyptus grandis HOM05D006880 ORTHO05D008638 1.1e-09 67.8 49 67.3
Nn8g39713 Nelumbo nucifera HOM05D006880 ORTHO05D008638 9.3e-06 54.7 36 66.7


User provided reference genes

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