Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0016900 Salix brachista HOM05D011447 ORTHO05D010069 1.6e-58 229.2 114 100.0
Sabra19G0026300 Salix brachista HOM05D011447 ORTHO05D010069 1.6e-58 229.2 114 100.0
Potri.019G013300 Populus trichocarpa HOM05D011447 ORTHO05D010069 1.3e-44 183.0 110 84.5
Potri.019G013750 Populus trichocarpa HOM05D011447 ORTHO05D010069 3.4e-40 168.3 111 81.1
Sabra19G0016700 Salix brachista HOM05D011447 ORTHO05D010069 4.1e-38 161.4 91 92.3
Sabra19G0026400 Salix brachista HOM05D011447 ORTHO05D010069 7.1e-38 160.6 91 92.3
Sabra19G0016800 Salix brachista HOM05D001365 ORTHO05D010069 1.7e-36 156.0 88 92.0
Sabra13G0040600 Salix brachista HOM05D011447 ORTHO05D010069 6.0e-29 131.0 117 63.2
Potri.013G043800 Populus trichocarpa HOM05D011447 ORTHO05D010069 7.8e-29 130.6 115 63.5
Potri.016G093900 Populus trichocarpa HOM05D011447 ORTHO05D010069 1.9e-27 125.9 115 62.6
Manes.08G137000 Manihot esculenta HOM05D011447 ORTHO05D010069 5.6e-19 97.8 98 55.1
Manes.08G137100 Manihot esculenta HOM05D011447 ORTHO05D010069 4.6e-13 78.2 99 48.5
Manes.09G150100 Manihot esculenta HOM05D011447 ORTHO05D010069 1.6e-10 69.7 120 43.3
QL03p028359 Quercus lobata HOM05D009218 ORTHO05D010069 2.8e-10 68.9 100 44.0
QL03p029061 Quercus lobata HOM05D009218 ORTHO05D010069 3.6e-10 68.6 100 44.0
QL03p028391 Quercus lobata HOM05D011447 ORTHO05D010069 2.6e-08 62.4 70 54.3
QL03p029028 Quercus lobata HOM05D011447 ORTHO05D010069 2.6e-08 62.4 70 54.3
Cpa.g.sc162.8 Carica papaya HOM05D009218 ORTHO05D010069 5.8e-08 61.2 49 61.2
PGR004G0279 Punica granatum HOM05D011447 ORTHO05D010069 7.6e-08 60.8 68 54.4
Nn3g19575 Nelumbo nucifera HOM05D011447 ORTHO05D010069 1.3e-07 60.1 70 48.6
Gorai.013G186400 Gossypium raimondii HOM05D009218 ORTHO05D010069 1.7e-07 59.7 46 67.4
Sc20g0000500 Simmondsia chinensis HOM05D009218 ORTHO05D010069 1.7e-07 59.7 41 65.9
CANSAT64G2862 Cannabis sativa HOM05D002974 ORTHO05D002992 2.2e-07 59.3 77 49.4
Cc06_g19310 Coffea canephora HOM05D002974 ORTHO05D002992 2.9e-07 58.9 58 56.9
Eucgr.H04261 Eucalyptus grandis HOM05D009218 ORTHO05D010069 2.9e-07 58.9 100 40.0
TAR623G1017 Trochodendron aralioides HOM05D002974 ORTHO05D002992 2.9e-07 58.9 74 47.3
CiPaw.07G070200 Carya illinoinensis HOM05D009218 ORTHO05D010069 4.9e-07 58.2 41 68.3
Nn7g36749 Nelumbo nucifera HOM05D002974 ORTHO05D002992 4.9e-07 58.2 66 50.0
PGSC0003DMG400023543 Solanum tuberosum HOM05D011340 ORTHO05D010069 4.9e-07 58.2 100 40.0
Aqoxy2G00396 Aquilegia oxysepala HOM05D002974 ORTHO05D002992 8.4e-07 57.4 94 39.4
CAN.G1465.2 Capsicum annuum HOM05D011340 ORTHO05D010069 8.4e-07 57.4 51 64.7
Gohir.A13G168950 Gossypium hirsutum HOM05D009218 ORTHO05D010069 8.4e-07 57.4 46 63.0
ClCG02G016900 Citrullus lanatus HOM05D009218 ORTHO05D010069 1.1e-06 57.0 86 43.0
COL.COLO4_15410 Corchorus olitorius HOM05D009218 ORTHO05D010069 1.1e-06 57.0 67 43.3
Duzib106G0159 Durio zibethinus HOM05D002974 ORTHO05D002992 1.1e-06 57.0 74 40.5
Gorai.012G018900 Gossypium raimondii HOM05D002974 ORTHO05D002992 1.1e-06 57.0 102 38.2
Atru.chr2.882 Acer truncatum HOM05D009218 ORTHO05D010069 1.4e-06 56.6 61 52.5
Ciclev10022688m.g Citrus clementina HOM05D009218 ORTHO05D010069 1.4e-06 56.6 57 52.6
CiPaw.07G070100 Carya illinoinensis HOM05D009218 ORTHO05D010069 1.9e-06 56.2 53 56.6
Medtr3g013980 Medicago truncatula HOM05D002974 ORTHO05D002992 1.9e-06 56.2 50 62.0
Thecc.05G277300 Theobroma cacao HOM05D009218 ORTHO05D010069 1.9e-06 56.2 49 59.2
Gohir.D13G174325 Gossypium hirsutum HOM05D009218 ORTHO05D010069 2.4e-06 55.8 46 65.2
Nn2g14777 Nelumbo nucifera HOM05D002974 ORTHO05D002992 2.4e-06 55.8 66 50.0
Actinidia01827 Actinidia chinensis HOM05D002974 ORTHO05D002992 3.2e-06 55.5 97 41.2
ClCG02G016910 Citrullus lanatus HOM05D009218 ORTHO05D010069 3.2e-06 55.5 55 50.9
Dinv05728 Davidia involucrata HOM05D009218 ORTHO05D010069 3.2e-06 55.5 99 34.3
Nitab4.5_0000930g0050 Nicotiana tabacum HOM05D011340 ORTHO05D010069 3.2e-06 55.5 48 58.3
Sed0017066 Sechium edule HOM05D009218 ORTHO05D010069 3.2e-06 55.5 99 43.4
CiPaw.10G040200 Carya illinoinensis HOM05D002974 ORTHO05D002992 4.2e-06 55.1 52 53.8
Nitab4.5_0009599g0020 Nicotiana tabacum HOM05D011340 ORTHO05D010069 4.2e-06 55.1 38 68.4
Nitab4.5_0022515g0010 Nicotiana tabacum HOM05D011340 ORTHO05D010069 4.2e-06 55.1 50 58.0
Rhsim05G0175900 Rhododendron simsii HOM05D009218 ORTHO05D010069 4.2e-06 55.1 52 55.8
TPR.G31150 Trifolium pratense HOM05D002974 ORTHO05D002992 4.2e-06 55.1 50 60.0
CsaV3_2G003860 Cucumis sativus L. HOM05D009218 ORTHO05D010069 5.5e-06 54.7 39 66.7
ATR1096G079 Amborella trichopoda HOM05D002974 ORTHO05D002992 7.1e-06 54.3 86 41.9
Nitab4.5_0000930g0040 Nicotiana tabacum HOM05D011340 ORTHO05D010069 7.1e-06 54.3 48 60.4
Sed0020224 Sechium edule HOM05D009218 ORTHO05D010069 7.1e-06 54.3 48 56.2
Atru.chr1.1439 Acer truncatum HOM05D002974 ORTHO05D002992 9.3e-06 53.9 55 50.9
Psat5g220360 Pisum sativum HOM05D002974 ORTHO05D002992 9.3e-06 53.9 50 60.0
Prupe.6G347000 Prunus persica HOM05D009218 ORTHO05D010069 9.3e-06 53.9 50 56.0
SHI31328 Sapria himalayana HOM05D011447 ORTHO05D010069 9.3e-06 53.9 62 50.0
PGSC0003DMG400025440 Solanum tuberosum HOM05D011340 ORTHO05D010069 9.3e-06 53.9 43 62.8
THA.LOC104820144 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 9.3e-06 53.9 45 64.4


User provided reference genes

Program Settings