Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0016300 Salix brachista HOM05D006721 ORTHO05D000476 2.2e-55 218.8 115 100.0
Sabra19G0026800 Salix brachista HOM05D006721 ORTHO05D000476 2.2e-55 218.8 115 100.0
Potri.019G014100 Populus trichocarpa HOM05D006721 ORTHO05D000476 2.8e-50 201.8 115 91.3
Manes.09G149900 Manihot esculenta HOM05D006721 ORTHO05D000476 1.7e-44 182.6 112 84.8
Ciclev10022930m.g Citrus clementina HOM05D006721 ORTHO05D000476 5.1e-44 181.0 115 81.7
Atru.chr2.886 Acer truncatum HOM05D006721 ORTHO05D000476 1.1e-41 173.3 113 79.6
PGR142G1199 Punica granatum HOM05D006721 ORTHO05D000476 1.5e-40 169.5 112 77.7
Glyma.03G251900 Glycine max HOM05D006721 ORTHO05D000476 5.8e-40 167.5 114 78.9
Eucgr.B02129 Eucalyptus grandis HOM05D006721 ORTHO05D000476 2.2e-39 165.6 114 74.6
QL03p032184 Quercus lobata HOM05D006721 ORTHO05D000476 2.2e-39 165.6 114 78.1
QL03p032281 Quercus lobata HOM05D006721 ORTHO05D000476 2.2e-39 165.6 114 78.1
QL01p041965 Quercus lobata HOM05D006721 ORTHO05D000476 4.9e-39 164.5 114 78.1
TAR365G0041 Trochodendron aralioides HOM05D006721 ORTHO05D000476 6.4e-39 164.1 107 80.4
Haze_04466 Corylus avellana HOM05D006721 ORTHO05D000476 2.4e-38 162.2 114 78.1
TWI56G0396 Tripterygium wilfordii HOM05D006721 ORTHO05D000476 2.4e-38 162.2 114 75.4
Prupe.6G347400 Prunus persica HOM05D006721 ORTHO05D000476 5.5e-38 161.0 119 74.8
CiPaw.07G077700 Carya illinoinensis HOM05D006721 ORTHO05D000476 1.6e-37 159.5 113 76.1
GSVIVG01036217001 Vitis vinifera HOM05D006721 ORTHO05D000476 1.6e-37 159.5 110 73.6
COL.COLO4_15417 Corchorus olitorius HOM05D006721 ORTHO05D000476 2.7e-37 158.7 115 72.2
HanXRQChr11g0322821 Helianthus annuus HOM05D006721 ORTHO05D000476 2.7e-37 158.7 106 77.4
Phvul.006G106600 Phaseolus vulgaris HOM05D006721 ORTHO05D000476 2.7e-37 158.7 114 74.6
Nn1g02669 Nelumbo nucifera HOM05D006721 ORTHO05D000476 3.5e-37 158.3 107 76.6
Dinv14631 Davidia involucrata HOM05D006721 ORTHO05D000476 4.6e-37 157.9 108 75.9
Medtr7g116300 Medicago truncatula HOM05D006721 ORTHO05D000476 4.6e-37 157.9 115 73.9
Lj1g0023872 Lotus japonicus HOM05D006721 ORTHO05D000476 1.8e-36 156.0 114 73.7
Thecc.05G276800 Theobroma cacao HOM05D006721 ORTHO05D000476 2.3e-36 155.6 113 71.7
RcHm_v2.0_Chr3g0450141 Rosa chinensis HOM05D006721 ORTHO05D000476 3.0e-36 155.2 120 74.2
Carub.0003s2825 Capsella rubella HOM05D006721 ORTHO05D000476 3.9e-36 154.8 107 75.7
Lsat_1_v5_gn_2_107641 Lactuca sativa HOM05D006721 ORTHO05D000476 3.9e-36 154.8 106 74.5
TPR.G6950 Trifolium pratense HOM05D006721 ORTHO05D000476 3.9e-36 154.8 112 74.1
CsaV3_2G003760 Cucumis sativus L. HOM05D006721 ORTHO05D000476 8.7e-36 153.7 114 71.9
Gohir.A13G168900 Gossypium hirsutum HOM05D006721 ORTHO05D000476 8.7e-36 153.7 115 72.2
Gohir.D13G174300 Gossypium hirsutum HOM05D006721 ORTHO05D000476 8.7e-36 153.7 115 72.2
Gorai.013G186500 Gossypium raimondii HOM05D006721 ORTHO05D000476 8.7e-36 153.7 115 72.2
Lalb_Chr04g0262001 Lupinus albus HOM05D006721 ORTHO05D000476 1.1e-35 153.3 114 73.7
THA.LOC104808031 Tarenaya hassleriana HOM05D006721 ORTHO05D000476 1.1e-35 153.3 114 72.8
MD12G1244800 Malus domestica HOM05D006721 ORTHO05D000476 1.5e-35 152.9 119 71.4
Dinv18276 Davidia involucrata HOM05D006721 ORTHO05D000476 1.9e-35 152.5 98 80.6
FvH4_6g02371 Fragaria vesca HOM05D006721 ORTHO05D000476 1.9e-35 152.5 119 70.6
FAN05G5208 Fragaria x ananassa HOM05D006721 ORTHO05D000476 1.9e-35 152.5 119 70.6
FAN14G0694 Fragaria x ananassa HOM05D004756 ORTHO05D005793 1.9e-35 152.5 119 70.6
Psat3g006080 Pisum sativum HOM05D006721 ORTHO05D000476 1.9e-35 152.5 116 71.6
CARHR104660 Cardamine hirsuta HOM05D006721 ORTHO05D000476 2.5e-35 152.1 113 70.8
Thhalv10023143m.g Eutrema salsugineum HOM05D006721 ORTHO05D000476 2.5e-35 152.1 113 69.9
Oeu058331.1 Olea europaea HOM05D006721 ORTHO05D000476 2.5e-35 152.1 104 77.9
Aa31LG8G12480 Aethionema arabicum HOM05D006721 ORTHO05D000476 4.3e-35 151.4 116 71.6
Sed0018278 Sechium edule HOM05D006721 ORTHO05D000476 4.3e-35 151.4 114 71.1
vmacro10349 Vaccinium macrocarpon HOM05D006721 ORTHO05D000476 5.6e-35 151.0 107 73.8
BraA03t13647Z Brassica rapa HOM05D006721 ORTHO05D000476 7.4e-35 150.6 113 70.8
ECA238G3797 Erigeron canadensis HOM05D006721 ORTHO05D000476 9.6e-35 150.2 106 70.8
Migut.F00814 Erythranthe guttata HOM05D006721 ORTHO05D000476 9.6e-35 150.2 107 71.0
EL10Ac4g09049 Beta vulgaris HOM05D006721 ORTHO05D000476 1.6e-34 149.4 115 67.8
CSS0047325 Camellia sinensis var. sinensis HOM05D006721 ORTHO05D000476 2.1e-34 149.1 106 74.5
Sp3g27300 Schrenkiella parvula HOM05D006721 ORTHO05D000476 2.1e-34 149.1 113 69.9
Ah.04g163750 Amaranthus hybridus HOM05D006721 ORTHO05D000476 3.7e-34 148.3 107 72.0
Cpa.g.sc162.11 Carica papaya HOM05D006721 ORTHO05D000476 3.7e-34 148.3 108 71.3
AT2G14045 Arabidopsis thaliana HOM05D006721 ORTHO05D000476 6.2e-34 147.5 113 69.9
Cfa006323 Carpinus fangiana HOM05D006721 ORTHO05D000476 6.2e-34 147.5 104 77.9
Actinidia38949 Actinidia chinensis HOM05D006721 ORTHO05D000476 1.4e-33 146.4 107 71.0
FAN14G4094 Fragaria x ananassa HOM05D004756 ORTHO05D005793 1.4e-33 146.4 115 70.4
Peaxi162Scf00135g00914 Petunia axillaris HOM05D006721 ORTHO05D000476 1.8e-33 146.0 107 72.0
FAN02G4370 Fragaria x ananassa HOM05D006721 ORTHO05D000476 4.0e-33 144.8 116 69.0
Sopen04g004980 Solanum pennellii HOM05D006721 ORTHO05D000476 4.0e-33 144.8 97 77.3
Nitab4.5_0000930g0080 Nicotiana tabacum HOM05D006721 ORTHO05D000476 5.3e-33 144.4 109 68.8
Actinidia34741 Actinidia chinensis HOM05D006721 ORTHO05D000476 6.9e-33 144.1 107 70.1
BcaC01g03109 Brassica carinata HOM05D006721 ORTHO05D000476 1.2e-32 143.3 113 69.0
BolC3t17881H Brassica oleracea HOM05D006721 ORTHO05D000476 1.2e-32 143.3 113 69.0
AUR62001066 Chenopodium quinoa HOM05D006721 ORTHO05D000476 1.5e-32 142.9 98 72.4
FAN05G3615 Fragaria x ananassa HOM05D004756 ORTHO05D005793 2.0e-32 142.5 119 66.4
PGSC0003DMG400025428 Solanum tuberosum HOM05D006721 ORTHO05D000476 2.0e-32 142.5 97 75.3
CANSAT54G3036 Cannabis sativa HOM05D006721 ORTHO05D000476 2.6e-32 142.1 114 66.7
SGA_v2.0_scaffold90G27702 Striga asiatica HOM05D006721 ORTHO05D000476 2.6e-32 142.1 107 71.0
HPP92_000759 Vanilla planifolia HOM05D006721 ORTHO05D000476 3.4e-32 141.7 90 78.9
Aqoxy2G03596 Aquilegia oxysepala HOM05D006721 ORTHO05D000476 4.5e-32 141.4 106 69.8
A03p45120 Brassica napus HOM05D006721 ORTHO05D000476 4.5e-32 141.4 108 69.4
Hund06940 Selenicereus undatus HOM05D006721 ORTHO05D000476 4.5e-32 141.4 102 68.6
CAN.G186.72 Capsicum annuum HOM05D006721 ORTHO05D000476 7.6e-32 140.6 107 70.1
CDE06G1546 Ceratophyllum demersum HOM05D006721 ORTHO05D000476 7.6e-32 140.6 105 69.5
MBI19_g37090_MAGBIO Magnolia biondii HOM05D006721 ORTHO05D000476 7.6e-32 140.6 109 69.7
PSO210G7245 Papaver somniferum HOM05D006721 ORTHO05D000476 7.6e-32 140.6 108 70.4
MSTRG.9005 Avicennia marina HOM05D006721 ORTHO05D000476 1.0e-31 140.2 105 69.5
AUR62004887 Chenopodium quinoa HOM05D006721 ORTHO05D000476 1.0e-31 140.2 98 70.4
Cc02_g09090 Coffea canephora HOM05D006721 ORTHO05D000476 1.0e-31 140.2 108 66.7
PSO832G0589 Papaver somniferum HOM05D006721 ORTHO05D000476 1.3e-31 139.8 108 70.4
Ca_09468_v3 Cicer arietinum L. HOM05D006721 ORTHO05D000476 1.7e-31 139.4 112 70.5
Gorai.008G193300 Gossypium raimondii HOM05D006721 ORTHO05D000476 1.7e-31 139.4 109 69.7
Nitab4.5_0002651g0060 Nicotiana tabacum HOM05D006721 ORTHO05D000476 1.7e-31 139.4 112 67.0
Os07g0185800 Oryza sativa ssp. japonica HOM05D006721 ORTHO05D000476 2.9e-31 138.7 91 73.6
AL3G45710 Arabidopsis lyrata HOM05D006721 ORTHO05D000476 4.9e-31 137.9 124 62.9
Gohir.D12G180151 Gossypium hirsutum HOM05D006721 ORTHO05D000476 1.1e-30 136.7 109 69.7
ATR0665G282 Amborella trichopoda HOM05D006721 ORTHO05D000476 3.2e-30 135.2 103 70.9
C03p55970 Brassica napus HOM05D006721 ORTHO05D000476 7.1e-30 134.0 108 67.6
Zm00001eb301780 Zea mays HOM05D006721 ORTHO05D000476 1.2e-29 133.3 88 73.9
Sc15g0002500 Simmondsia chinensis HOM05D006721 ORTHO05D000476 2.1e-29 132.5 82 78.0
GSVIVG01014622001 Vitis vinifera HOM05D006721 ORTHO05D000476 1.5e-27 126.3 81 76.5
GSVIVG01015127001 Vitis vinifera HOM05D006721 ORTHO05D000476 5.7e-27 124.4 82 76.8
Duzib128G0372 Durio zibethinus HOM05D006721 ORTHO05D000476 6.3e-26 120.9 114 62.3
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 3.4e-24 115.2 103 62.1
arahy.Tifrunner.gnm1.ann1.DA1MAK Arachis hypogaea HOM05D006721 ORTHO05D000476 6.1e-21 104.4 84 66.7
arahy.Tifrunner.gnm1.ann1.P0L55B Arachis hypogaea HOM05D006721 ORTHO05D000476 6.1e-21 104.4 84 66.7
SMO367G0192 Selaginella moellendorffii HOM05D001348 ORTHO05D002788 6.1e-21 104.4 85 62.4
Mapoly0013s0055 Marchantia polymorpha HOM05D006721 ORTHO05D000476 3.0e-20 102.1 84 59.5
Pp3c7_11510 Physcomitrium patens HOM05D006721 ORTHO05D000476 3.3e-19 98.6 85 52.9
BraA09t38027Z Brassica rapa HOM05D006721 ORTHO05D000476 2.2e-18 95.9 82 62.2
BraA10t43135Z Brassica rapa HOM05D006721 ORTHO05D000476 2.2e-18 95.9 82 62.2
BraA06t26268Z Brassica rapa HOM05D006721 ORTHO05D000476 3.7e-18 95.1 83 63.9
MELO3C004419.2 Cucumis melo HOM05D006721 ORTHO05D000476 3.7e-18 95.1 126 46.8
A07p07050 Brassica napus HOM05D006721 ORTHO05D000476 1.1e-17 93.6 81 61.7
CBR_g51472 Chara braunii HOM05D006721 ORTHO05D000476 1.1e-14 83.6 89 44.9
ClCG02G016980 Citrullus lanatus HOM05D006721 ORTHO05D000476 2.5e-14 82.4 116 44.8
MCO10G233 Micromonas commoda HOM05D006721 ORTHO05D000476 2.5e-14 82.4 81 58.0
A09p24350 Brassica napus HOM05D006721 ORTHO05D000476 1.6e-13 79.7 58 67.2
FAN09G4219 Fragaria x ananassa HOM05D006721 ORTHO05D000476 3.6e-13 78.6 81 55.6
C07p11900 Brassica napus HOM05D006721 ORTHO05D000476 4.6e-13 78.2 76 61.8
PRCOL_00003504 Prasinoderma coloniale HOM05D006721 ORTHO05D000476 6.1e-13 77.8 68 55.9
A01p30750 Brassica napus HOM05D001035 ORTHO05D000476 7.9e-13 77.4 58 65.5
Rhsim09G0138600 Rhododendron simsii HOM05D006721 ORTHO05D000476 7.9e-13 77.4 69 60.9
BcaB06g29605 Brassica carinata HOM05D001035 ORTHO05D021752 3.9e-12 75.1 58 62.1
Zm00001eb112450 Zea mays HOM05D006721 ORTHO05D000476 6.7e-12 74.3 51 66.7
BolC7t41661H Brassica oleracea HOM05D006721 ORTHO05D000476 2.5e-11 72.4 78 57.7
Cre02.g105950 Chlamydomonas reinhardtii HOM05D006721 ORTHO05D000476 7.4e-11 70.9 85 44.7
A05p09770 Brassica napus HOM05D006721 ORTHO05D000476 1.8e-09 66.2 49 69.4
DCAR_030976 Daucus carota HOM05D006721 ORTHO05D000476 1.8e-09 66.2 54 57.4
SHI31376 Sapria himalayana HOM05D006721 ORTHO05D000476 3.8e-07 58.5 46 58.7


User provided reference genes

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