Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0011800 Salix brachista HOM05D007656 ORTHO05D008529 2.3e-277 958.4 526 100.0
Sabra19G0010500 Salix brachista HOM05D007656 ORTHO05D008529 1.0e-139 501.1 361 76.5
Sabra19G0012000 Salix brachista HOM05D007656 ORTHO05D008529 4.2e-77 293.1 206 76.7
Sabra19G0001900 Salix brachista HOM05D007656 ORTHO05D008529 3.1e-48 197.2 134 78.4
SabraUnG0004400 Salix brachista HOM05D003906 ORTHO05D004776 2.9e-46 190.7 148 70.3
Sabra19G0000500 Salix brachista HOM05D007656 ORTHO05D349312 8.5e-46 189.1 167 66.5
Sabra19G0011600 Salix brachista HOM05D007656 ORTHO05D008529 3.2e-45 187.2 149 71.8
Sabra19G0012300 Salix brachista HOM05D002390 ORTHO05D002846 1.0e-43 182.2 131 74.8
Potri.001G007501 Populus trichocarpa HOM05D007656 ORTHO05D008529 8.3e-41 172.6 136 69.9
Potri.T044600 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.1e-37 162.2 137 65.7
Potri.018G145558 Populus trichocarpa HOM05D000101 ORTHO05D000089 3.0e-35 154.1 142 62.7
Potri.018G023600 Populus trichocarpa HOM05D007656 ORTHO05D008529 3.5e-31 140.6 136 53.7
Sabra18G0026200 Salix brachista HOM05D007656 ORTHO05D008529 2.5e-29 134.4 136 52.2
Sabra17G0068400 Salix brachista HOM05D007656 ORTHO05D008529 4.3e-29 133.7 83 78.3
Sabra18G0026100 Salix brachista HOM05D007656 ORTHO05D008529 5.6e-29 133.3 136 51.5
Potri.006G267201 Populus trichocarpa HOM05D007656 ORTHO05D008529 7.5e-26 122.9 146 43.8
Sabra19G0000800 Salix brachista HOM05D007656 ORTHO05D008529 2.4e-24 117.9 115 64.3
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 4.0e-19 100.5 356 27.2
Manes.04G013200 Manihot esculenta HOM05D000548 ORTHO05D008529 6.8e-19 99.8 138 43.5
Sabra06G0209500 Salix brachista HOM05D007656 ORTHO05D008529 8.3e-17 92.8 130 37.7
TWI53G0295 Tripterygium wilfordii HOM05D000694 ORTHO05D008529 1.9e-16 91.7 139 37.4
Potri.018G145554 Populus trichocarpa HOM05D007656 ORTHO05D008529 1.0e-14 85.9 99 57.6
MD07G1045600 Malus domestica HOM05D000009 ORTHO05D000008 1.9e-13 81.6 139 37.4
MD15G1057200 Malus domestica HOM05D000521 ORTHO05D008529 2.1e-12 78.2 152 35.5
Thecc.02G020200 Theobroma cacao HOM05D007656 ORTHO05D008529 2.8e-12 77.8 142 34.5
Ciclev10002149m.g Citrus clementina HOM05D007656 ORTHO05D008529 6.2e-12 76.6 128 36.7
Ciclev10021347m.g Citrus clementina HOM05D007656 ORTHO05D008529 8.1e-12 76.3 140 32.9
COL.COLO4_30650 Corchorus olitorius HOM05D007656 ORTHO05D008529 8.1e-12 76.3 251 26.7
FAN15G0049 Fragaria x ananassa HOM05D007656 ORTHO05D008529 1.1e-11 75.9 155 36.1
FAN24G2886 Fragaria x ananassa HOM05D000005 ORTHO05D008529 1.1e-11 75.9 150 36.0
MD07G1045400 Malus domestica HOM05D000009 ORTHO05D000008 1.1e-11 75.9 139 36.7
FAN21G1592 Fragaria x ananassa HOM05D000005 ORTHO05D008529 1.4e-11 75.5 148 36.5
FvH4_2g06640 Fragaria vesca HOM05D007656 ORTHO05D008529 1.8e-11 75.1 150 36.0
RcHm_v2.0_Chr6g0276291 Rosa chinensis HOM05D000005 ORTHO05D008529 1.8e-11 75.1 143 35.0
Atru.chr1.33 Acer truncatum HOM05D007656 ORTHO05D008529 2.3e-11 74.7 147 30.6
Thecc.02G021500 Theobroma cacao HOM05D007656 ORTHO05D008529 2.3e-11 74.7 156 32.1
Prupe.8G120400 Prunus persica HOM05D000005 ORTHO05D000012 3.1e-11 74.3 154 34.4
Thecc.01G158100 Theobroma cacao HOM05D007656 ORTHO05D008529 3.1e-11 74.3 149 31.5
FvH4_2g06570 Fragaria vesca HOM05D007656 ORTHO05D008529 4.0e-11 73.9 155 35.5
Prupe.5G012300 Prunus persica HOM05D007656 ORTHO05D008529 4.0e-11 73.9 139 36.0
Prupe.8G119800 Prunus persica HOM05D000005 ORTHO05D000012 4.0e-11 73.9 149 35.6
Sabra19G0011900 Salix brachista HOM05D007656 ORTHO05D008529 5.2e-11 73.6 45 75.6
RcHm_v2.0_Chr6g0276251 Rosa chinensis HOM05D000005 ORTHO05D008529 6.8e-11 73.2 143 34.3
TWI18G0941 Tripterygium wilfordii HOM05D010260 ORTHO05D008529 6.8e-11 73.2 173 31.8
Manes.10G131300 Manihot esculenta HOM05D007656 ORTHO05D008529 1.2e-10 72.4 144 29.9
Prupe.8G120300 Prunus persica HOM05D000005 ORTHO05D000012 2.0e-10 71.6 200 30.5
Prupe.4G127700 Prunus persica HOM05D007656 ORTHO05D008529 3.4e-10 70.9 143 36.4
THA.LOC104820128 Tarenaya hassleriana HOM05D007656 ORTHO05D008529 5.8e-10 70.1 161 28.6
MD07G1044900 Malus domestica HOM05D007656 ORTHO05D008529 7.6e-10 69.7 137 34.3
Ciclev10024498m.g Citrus clementina HOM05D007656 ORTHO05D008529 9.9e-10 69.3 138 31.2
FvH4_2g36090 Fragaria vesca HOM05D000005 ORTHO05D008529 1.3e-09 68.9 148 34.5
Duzib132G0971 Durio zibethinus HOM05D007656 ORTHO05D008529 2.2e-09 68.2 141 31.2
MD02G1277000 Malus domestica HOM05D007656 ORTHO05D008529 2.9e-09 67.8 144 33.3
RcHm_v2.0_Chr6g0276271 Rosa chinensis HOM05D000005 ORTHO05D008529 2.9e-09 67.8 140 35.0
Prupe.5G011700 Prunus persica HOM05D007656 ORTHO05D008529 6.4e-09 66.6 139 33.1
TWI18G1447 Tripterygium wilfordii HOM05D000008 ORTHO05D413543 6.4e-09 66.6 147 34.7
FvH4_2g14140 Fragaria vesca HOM05D000005 ORTHO05D008529 8.4e-09 66.2 148 33.8
Prupe.5G012700 Prunus persica HOM05D007656 ORTHO05D008529 1.4e-08 65.5 140 35.7
MD00G1172900 Malus domestica HOM05D000009 ORTHO05D000008 1.9e-08 65.1 139 31.7
Prupe.5G011800 Prunus persica HOM05D007656 ORTHO05D008529 1.9e-08 65.1 139 32.4
Prupe.5G012500 Prunus persica HOM05D007656 ORTHO05D008529 1.9e-08 65.1 140 35.7
FvH4_2g06610 Fragaria vesca HOM05D000005 ORTHO05D008529 3.2e-08 64.3 140 32.9
FvH4_2g36100 Fragaria vesca HOM05D000005 ORTHO05D029394 3.2e-08 64.3 158 29.1
Manes.01G113600 Manihot esculenta HOM05D007656 ORTHO05D008529 3.2e-08 64.3 127 29.1
Prupe.1G197200 Prunus persica HOM05D007656 ORTHO05D008529 3.2e-08 64.3 139 33.1
MD05G1139600 Malus domestica HOM05D000494 ORTHO05D008529 4.1e-08 63.9 142 29.6
Prupe.5G012400 Prunus persica HOM05D007656 ORTHO05D008529 4.1e-08 63.9 139 31.7
AT2G20142 Arabidopsis thaliana HOM05D000005 ORTHO05D000294 5.4e-08 63.5 212 26.9
RcHm_v2.0_Chr6g0258551 Rosa chinensis HOM05D007656 ORTHO05D008529 5.4e-08 63.5 157 29.3
Thecc.02G020900 Theobroma cacao HOM05D007656 ORTHO05D008529 5.4e-08 63.5 138 30.4
MD06G1218400 Malus domestica HOM05D000306 ORTHO05D008529 7.1e-08 63.2 137 35.8
Manes.12G099400 Manihot esculenta HOM05D000009 ORTHO05D000008 7.1e-08 63.2 141 27.0
FvH4_2g14130 Fragaria vesca HOM05D007656 ORTHO05D029394 9.2e-08 62.8 141 30.5
RcHm_v2.0_Chr6g0258611 Rosa chinensis HOM05D007656 ORTHO05D008529 9.2e-08 62.8 142 31.0
Thecc.02G020400 Theobroma cacao HOM05D007656 ORTHO05D008529 1.2e-07 62.4 130 30.8
BcaC06g31517 Brassica carinata HOM05D000005 ORTHO05D000294 1.6e-07 62.0 163 30.1
AL3G47945 Arabidopsis lyrata HOM05D000005 ORTHO05D000294 2.1e-07 61.6 153 29.4
Prupe.8G119700 Prunus persica HOM05D007656 ORTHO05D008529 2.1e-07 61.6 144 34.0
Thecc.02G023800 Theobroma cacao HOM05D007656 ORTHO05D008529 2.1e-07 61.6 138 31.2
BcaC06g34402 Brassica carinata HOM05D000005 ORTHO05D008529 2.7e-07 61.2 163 29.4
A06p46380 Brassica napus HOM05D000005 ORTHO05D000294 2.7e-07 61.2 163 28.8
C07p29060 Brassica napus HOM05D001366 ORTHO05D008529 2.7e-07 61.2 163 29.4
BolC7t43445H Brassica oleracea HOM05D001366 ORTHO05D008529 2.7e-07 61.2 163 29.4
BraA06t27502Z Brassica rapa HOM05D000005 ORTHO05D000294 2.7e-07 61.2 163 28.8
MD15G1057100 Malus domestica HOM05D007656 ORTHO05D008529 2.7e-07 61.2 102 36.3
Thecc.02G023700 Theobroma cacao HOM05D007656 ORTHO05D008529 2.7e-07 61.2 141 29.1
Thhalv10002051m.g Eutrema salsugineum HOM05D000005 ORTHO05D008529 6.0e-07 60.1 216 27.8
Carub.0003s3445 Capsella rubella HOM05D000005 ORTHO05D000294 7.8e-07 59.7 163 27.6
CARHR110670 Cardamine hirsuta HOM05D000005 ORTHO05D008529 1.0e-06 59.3 162 26.5
BolC8t51984H Brassica oleracea HOM05D007656 ORTHO05D008529 1.3e-06 58.9 162 27.2
Manes.10G012300 Manihot esculenta HOM05D000510 ORTHO05D001548 1.3e-06 58.9 138 28.3
FAN20G3034 Fragaria x ananassa HOM05D000005 ORTHO05D029394 3.0e-06 57.8 138 30.4
CARHR110660 Cardamine hirsuta HOM05D000005 ORTHO05D008529 5.1e-06 57.0 162 25.9
Duzib213G0740 Durio zibethinus HOM05D007656 ORTHO05D008529 6.6e-06 56.6 181 24.3


User provided reference genes

Program Settings