Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0010500 Salix brachista HOM05D007656 ORTHO05D008529 2.5e-195 685.3 350 100.0
Sabra19G0011800 Salix brachista HOM05D007656 ORTHO05D008529 3.4e-139 498.8 361 76.5
Sabra19G0012000 Salix brachista HOM05D007656 ORTHO05D008529 6.2e-85 318.5 198 84.3
Sabra19G0000500 Salix brachista HOM05D007656 ORTHO05D349312 1.3e-63 247.7 142 91.5
SabraUnG0004400 Salix brachista HOM05D003906 ORTHO05D004776 7.4e-54 215.3 143 79.0
Sabra19G0001900 Salix brachista HOM05D007656 ORTHO05D008529 1.2e-51 208.0 122 89.3
Sabra19G0012300 Salix brachista HOM05D002390 ORTHO05D002846 1.2e-48 198.0 117 88.0
Sabra19G0011600 Salix brachista HOM05D007656 ORTHO05D008529 8.8e-47 191.8 134 79.1
Potri.001G007501 Populus trichocarpa HOM05D007656 ORTHO05D008529 1.3e-45 188.0 142 72.5
Potri.T044600 Populus trichocarpa HOM05D000101 ORTHO05D000089 7.7e-43 178.7 126 74.6
Potri.018G145558 Populus trichocarpa HOM05D000101 ORTHO05D000089 5.2e-39 166.0 129 69.8
Sabra17G0068400 Salix brachista HOM05D007656 ORTHO05D008529 7.7e-35 152.1 82 89.0
Potri.018G023600 Populus trichocarpa HOM05D007656 ORTHO05D008529 2.9e-34 150.2 129 60.5
Sabra18G0026200 Salix brachista HOM05D007656 ORTHO05D008529 6.8e-31 139.0 131 57.3
Sabra18G0026100 Salix brachista HOM05D007656 ORTHO05D008529 5.7e-30 136.0 131 55.0
Sabra19G0000800 Salix brachista HOM05D007656 ORTHO05D008529 2.8e-29 133.7 119 65.5
Potri.006G267201 Populus trichocarpa HOM05D007656 ORTHO05D008529 7.0e-28 129.0 131 49.6
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 1.8e-23 114.4 130 46.9
Manes.04G013200 Manihot esculenta HOM05D000548 ORTHO05D008529 1.7e-21 107.8 134 47.8
Potri.018G145554 Populus trichocarpa HOM05D007656 ORTHO05D008529 3.5e-19 100.1 68 80.9
Sabra06G0209500 Salix brachista HOM05D007656 ORTHO05D008529 7.7e-19 99.0 116 43.1
TWI53G0295 Tripterygium wilfordii HOM05D000694 ORTHO05D008529 3.8e-18 96.7 133 41.4
MD07G1045600 Malus domestica HOM05D000009 ORTHO05D000008 6.1e-16 89.4 129 41.9
Thecc.02G020200 Theobroma cacao HOM05D007656 ORTHO05D008529 5.2e-15 86.3 137 39.4
Sabra19G0011900 Salix brachista HOM05D007656 ORTHO05D008529 1.2e-14 85.1 44 88.6
MD07G1045400 Malus domestica HOM05D000009 ORTHO05D000008 1.5e-14 84.7 128 41.4
Thecc.01G158100 Theobroma cacao HOM05D007656 ORTHO05D008529 4.4e-14 83.2 135 36.3
Prupe.5G012300 Prunus persica HOM05D007656 ORTHO05D008529 5.7e-14 82.8 136 39.7
Ciclev10002149m.g Citrus clementina HOM05D007656 ORTHO05D008529 2.2e-13 80.9 135 38.5
Ciclev10021347m.g Citrus clementina HOM05D007656 ORTHO05D008529 2.8e-13 80.5 138 34.8
FAN15G0049 Fragaria x ananassa HOM05D007656 ORTHO05D008529 2.8e-13 80.5 153 38.6
Manes.10G131300 Manihot esculenta HOM05D007656 ORTHO05D008529 3.7e-13 80.1 160 32.5
FvH4_2g06570 Fragaria vesca HOM05D007656 ORTHO05D008529 8.3e-13 79.0 153 37.9
Atru.chr1.33 Acer truncatum HOM05D007656 ORTHO05D008529 1.4e-12 78.2 144 31.9
MD15G1057200 Malus domestica HOM05D000521 ORTHO05D008529 1.8e-12 77.8 146 37.0
RcHm_v2.0_Chr6g0276251 Rosa chinensis HOM05D000005 ORTHO05D008529 1.8e-12 77.8 133 39.1
RcHm_v2.0_Chr6g0276291 Rosa chinensis HOM05D000005 ORTHO05D008529 1.8e-12 77.8 133 39.1
FAN21G1592 Fragaria x ananassa HOM05D000005 ORTHO05D008529 2.4e-12 77.4 142 39.4
Prupe.8G120300 Prunus persica HOM05D000005 ORTHO05D000012 3.2e-12 77.0 256 30.9
Thecc.02G021500 Theobroma cacao HOM05D007656 ORTHO05D008529 3.2e-12 77.0 161 34.2
TWI18G0941 Tripterygium wilfordii HOM05D010260 ORTHO05D008529 3.2e-12 77.0 129 38.8
FAN24G2886 Fragaria x ananassa HOM05D000005 ORTHO05D008529 5.4e-12 76.3 132 38.6
Prupe.5G011700 Prunus persica HOM05D007656 ORTHO05D008529 5.4e-12 76.3 133 38.3
FvH4_2g06640 Fragaria vesca HOM05D007656 ORTHO05D008529 9.2e-12 75.5 132 38.6
MD07G1044900 Malus domestica HOM05D007656 ORTHO05D008529 1.2e-11 75.1 120 39.2
Manes.12G099400 Manihot esculenta HOM05D000009 ORTHO05D000008 1.2e-11 75.1 132 33.3
Prupe.5G011800 Prunus persica HOM05D007656 ORTHO05D008529 1.6e-11 74.7 133 37.6
Ciclev10024525m.g Citrus clementina HOM05D007656 ORTHO05D008529 2.7e-11 73.9 136 35.3
Duzib132G0971 Durio zibethinus HOM05D007656 ORTHO05D008529 2.7e-11 73.9 161 31.7
Prupe.8G120400 Prunus persica HOM05D000005 ORTHO05D000012 3.5e-11 73.6 133 39.8
RcHm_v2.0_Chr6g0276271 Rosa chinensis HOM05D000005 ORTHO05D008529 4.5e-11 73.2 133 36.8
MD05G1139600 Malus domestica HOM05D000494 ORTHO05D008529 5.9e-11 72.8 129 31.0
Prupe.5G012400 Prunus persica HOM05D007656 ORTHO05D008529 5.9e-11 72.8 130 38.5
FvH4_2g36090 Fragaria vesca HOM05D000005 ORTHO05D008529 7.8e-11 72.4 142 37.3
Prupe.8G119800 Prunus persica HOM05D000005 ORTHO05D000012 7.8e-11 72.4 133 38.3
MD02G1277000 Malus domestica HOM05D007656 ORTHO05D008529 1.7e-10 71.2 132 34.8
RcHm_v2.0_Chr6g0258611 Rosa chinensis HOM05D007656 ORTHO05D008529 1.7e-10 71.2 137 36.5
Ciclev10024498m.g Citrus clementina HOM05D007656 ORTHO05D008529 2.3e-10 70.9 127 35.4
Prupe.4G127700 Prunus persica HOM05D007656 ORTHO05D008529 2.3e-10 70.9 129 40.3
Prupe.5G012700 Prunus persica HOM05D007656 ORTHO05D008529 2.3e-10 70.9 133 38.3
THA.LOC104820128 Tarenaya hassleriana HOM05D007656 ORTHO05D008529 2.3e-10 70.9 135 33.3
Prupe.5G012500 Prunus persica HOM05D007656 ORTHO05D008529 2.9e-10 70.5 133 38.3
MD00G1172900 Malus domestica HOM05D000009 ORTHO05D000008 3.9e-10 70.1 127 34.6
Manes.01G113600 Manihot esculenta HOM05D007656 ORTHO05D008529 3.9e-10 70.1 145 33.8
FvH4_2g06610 Fragaria vesca HOM05D000005 ORTHO05D008529 5.0e-10 69.7 133 36.1
FvH4_2g14140 Fragaria vesca HOM05D000005 ORTHO05D008529 5.0e-10 69.7 142 36.6
TWI18G1447 Tripterygium wilfordii HOM05D000008 ORTHO05D413543 5.0e-10 69.7 134 37.3
FvH4_2g36100 Fragaria vesca HOM05D000005 ORTHO05D029394 6.6e-10 69.3 152 34.2
Thecc.02G020000 Theobroma cacao HOM05D007656 ORTHO05D008529 8.6e-10 68.9 208 29.8
Ciclev10003516m.g Citrus clementina HOM05D007656 ORTHO05D008529 1.1e-09 68.6 138 29.7
COL.COLO4_30650 Corchorus olitorius HOM05D007656 ORTHO05D008529 1.5e-09 68.2 143 35.0
Prupe.1G197200 Prunus persica HOM05D007656 ORTHO05D008529 1.9e-09 67.8 134 36.6
Thecc.02G020400 Theobroma cacao HOM05D007656 ORTHO05D008529 1.9e-09 67.8 124 34.7
Thecc.02G020900 Theobroma cacao HOM05D007656 ORTHO05D008529 1.9e-09 67.8 136 33.8
FvH4_2g14130 Fragaria vesca HOM05D007656 ORTHO05D029394 2.5e-09 67.4 138 34.8
Prupe.8G119700 Prunus persica HOM05D007656 ORTHO05D008529 5.6e-09 66.2 139 36.7
COL.COLO4_29685 Corchorus olitorius HOM05D007656 ORTHO05D008529 7.3e-09 65.9 137 34.3
AT2G20142 Arabidopsis thaliana HOM05D000005 ORTHO05D000294 9.5e-09 65.5 156 30.1
MD06G1218400 Malus domestica HOM05D000306 ORTHO05D008529 1.2e-08 65.1 135 38.5
AL3G47945 Arabidopsis lyrata HOM05D000005 ORTHO05D000294 1.6e-08 64.7 146 31.5
BcaC06g31517 Brassica carinata HOM05D000005 ORTHO05D000294 1.6e-08 64.7 186 28.5
BcaC06g34402 Brassica carinata HOM05D000005 ORTHO05D008529 1.6e-08 64.7 186 28.5
C07p29060 Brassica napus HOM05D001366 ORTHO05D008529 1.6e-08 64.7 186 28.5
BolC7t43445H Brassica oleracea HOM05D001366 ORTHO05D008529 1.6e-08 64.7 186 28.5
BolC8t51984H Brassica oleracea HOM05D007656 ORTHO05D008529 1.6e-08 64.7 157 29.3
Thecc.02G020700 Theobroma cacao HOM05D007656 ORTHO05D008529 1.6e-08 64.7 169 29.6
Atru.chr6.33 Acer truncatum HOM05D007656 ORTHO05D008529 3.6e-08 63.5 172 29.1
A06p46380 Brassica napus HOM05D000005 ORTHO05D000294 3.6e-08 63.5 223 24.7
BraA06t27502Z Brassica rapa HOM05D000005 ORTHO05D000294 3.6e-08 63.5 223 24.7
MD15G1057100 Malus domestica HOM05D007656 ORTHO05D008529 3.6e-08 63.5 97 38.1
Manes.10G012300 Manihot esculenta HOM05D000510 ORTHO05D001548 3.6e-08 63.5 132 31.8
RcHm_v2.0_Chr6g0258551 Rosa chinensis HOM05D007656 ORTHO05D008529 3.6e-08 63.5 152 30.3
Thecc.07G066400 Theobroma cacao HOM05D000521 ORTHO05D008529 6.1e-08 62.8 127 30.7
Thhalv10002051m.g Eutrema salsugineum HOM05D000005 ORTHO05D008529 1.0e-07 62.0 181 29.8
Thecc.02G023700 Theobroma cacao HOM05D007656 ORTHO05D008529 1.0e-07 62.0 139 30.2
Thecc.02G023800 Theobroma cacao HOM05D007656 ORTHO05D008529 1.0e-07 62.0 136 31.6
CARHR110660 Cardamine hirsuta HOM05D000005 ORTHO05D008529 1.4e-07 61.6 185 27.6
CARHR110670 Cardamine hirsuta HOM05D000005 ORTHO05D008529 1.8e-07 61.2 185 27.0
FAN20G3034 Fragaria x ananassa HOM05D000005 ORTHO05D029394 1.8e-07 61.2 136 33.8
Carub.0003s3445 Capsella rubella HOM05D000005 ORTHO05D000294 3.1e-07 60.5 156 28.2
Duzib213G0740 Durio zibethinus HOM05D007656 ORTHO05D008529 8.9e-07 58.9 131 27.5
Prupe.8G120000 Prunus persica HOM05D007656 ORTHO05D008529 2.6e-06 57.4 120 35.0
Ciclev10003101m.g Citrus clementina HOM05D007656 ORTHO05D008529 7.5e-06 55.8 131 26.0


User provided reference genes

Program Settings