Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0007500 Salix brachista HOM05D000219 ORTHO05D006860 3.2e-156 555.1 284 100.0
Sabra19G0008600 Salix brachista HOM05D000219 ORTHO05D006860 2.8e-104 382.5 241 84.6
Sabra19G0007700 Salix brachista HOM05D000219 ORTHO05D006860 4.9e-104 381.7 241 85.1
Sabra19G0007900 Salix brachista HOM05D000219 ORTHO05D006860 1.2e-99 367.1 241 82.6
Sabra19G0008200 Salix brachista HOM05D000219 ORTHO05D006860 1.2e-99 367.1 241 82.6
Sabra19G0003100 Salix brachista HOM05D000219 ORTHO05D006860 7.8e-78 294.7 241 70.1
Sabra19G0009100 Salix brachista HOM05D000219 ORTHO05D006860 1.7e-77 293.5 241 69.7
Potri.T010600 Populus trichocarpa HOM05D000219 ORTHO05D006860 5.1e-77 292.0 241 69.3
Sabra19G0052800 Salix brachista HOM05D000219 ORTHO05D006860 1.2e-75 287.3 241 68.5
Potri.004G138700 Populus trichocarpa HOM05D000219 ORTHO05D006860 1.7e-72 276.9 241 64.7
Manes.13G076700 Manihot esculenta HOM05D000219 ORTHO05D006860 7.8e-70 268.1 241 63.1
Glyma.08G004800 Glycine max HOM05D000219 ORTHO05D006860 5.2e-66 255.4 241 58.5
Glyma.05G197400 Glycine max HOM05D000219 ORTHO05D006860 1.2e-65 254.2 241 58.1
Medtr8g095220 Medicago truncatula HOM05D000219 ORTHO05D006860 1.2e-65 254.2 241 58.5
Cpa.g.sc47.14 Carica papaya HOM05D000219 ORTHO05D006860 2.0e-65 253.4 241 58.5
arahy.Tifrunner.gnm1.ann1.4SGX54 Arachis hypogaea HOM05D000219 ORTHO05D006860 1.3e-64 250.8 239 57.7
arahy.Tifrunner.gnm1.ann1.8C4MGB Arachis hypogaea HOM05D000219 ORTHO05D006860 1.3e-64 250.8 239 57.7
Psat7g041480 Pisum sativum HOM05D000219 ORTHO05D006860 1.7e-64 250.4 241 58.1
QL10p038963 Quercus lobata HOM05D000219 ORTHO05D006860 2.2e-64 250.0 240 58.3
THA.LOC104800311 Tarenaya hassleriana HOM05D000219 ORTHO05D006860 3.8e-64 249.2 241 58.5
Ciclev10025619m.g Citrus clementina HOM05D000219 ORTHO05D006860 4.9e-64 248.8 241 58.5
Lalb_Chr07g0184051 Lupinus albus HOM05D000219 ORTHO05D006860 6.4e-64 248.4 241 58.1
Ca_17594_v3 Cicer arietinum L. HOM05D000219 ORTHO05D006860 1.1e-63 247.7 241 56.0
Lj4g0001086 Lotus japonicus HOM05D000219 ORTHO05D006860 1.4e-63 247.3 239 56.5
ClCG04G003060 Citrullus lanatus HOM05D000219 ORTHO05D006860 2.4e-63 246.5 239 57.7
Atru.chr4.1141 Acer truncatum HOM05D000219 ORTHO05D006860 4.2e-63 245.7 239 58.2
TPR.G12844 Trifolium pratense HOM05D000219 ORTHO05D006860 4.2e-63 245.7 241 55.2
VMungo0251G2495 Vigna mungo HOM05D000219 ORTHO05D006860 5.4e-63 245.4 241 56.4
CARHR277500 Cardamine hirsuta HOM05D000219 ORTHO05D006860 7.1e-63 245.0 241 57.3
BcaC01g02616 Brassica carinata HOM05D000219 ORTHO05D006860 9.3e-63 244.6 241 56.8
C03p62820 Brassica napus HOM05D000219 ORTHO05D006860 9.3e-63 244.6 241 56.8
Thecc.01G237700 Theobroma cacao HOM05D000219 ORTHO05D006860 9.3e-63 244.6 241 58.1
BolC3t18536H Brassica oleracea HOM05D000219 ORTHO05D006860 1.2e-62 244.2 241 56.8
CsaV3_4G027540 Cucumis sativus L. HOM05D000219 ORTHO05D006860 2.1e-62 243.4 239 56.9
A06p30240 Brassica napus HOM05D000219 ORTHO05D006860 2.7e-62 243.0 241 56.4
Phvul.002G277900 Phaseolus vulgaris HOM05D000219 ORTHO05D006860 3.5e-62 242.7 241 56.4
AT5G63620 Arabidopsis thaliana HOM05D000219 ORTHO05D006860 4.6e-62 242.3 241 56.4
BraA06t25973Z Brassica rapa HOM05D000219 ORTHO05D006860 4.6e-62 242.3 241 56.4
Thhalv10005729m.g Eutrema salsugineum HOM05D000219 ORTHO05D006860 4.6e-62 242.3 241 56.0
AL8G40740 Arabidopsis lyrata HOM05D000219 ORTHO05D006860 1.0e-61 241.1 241 56.0
BcaB02g09744 Brassica carinata HOM05D000219 ORTHO05D006860 1.7e-61 240.4 241 56.4
Eucgr.I00009 Eucalyptus grandis HOM05D000219 ORTHO05D006860 1.7e-61 240.4 240 57.1
Carub.0008s2438 Capsella rubella HOM05D000219 ORTHO05D006860 3.0e-61 239.6 241 55.6
RcHm_v2.0_Chr2g0123611 Rosa chinensis HOM05D000219 ORTHO05D006860 5.1e-61 238.8 241 55.6
GSVIVG01022421001 Vitis vinifera HOM05D000219 ORTHO05D006860 6.6e-61 238.4 241 56.4
Cfa002239 Carpinus fangiana HOM05D000219 ORTHO05D006860 8.7e-61 238.0 241 56.8
Sed0016333 Sechium edule HOM05D000219 ORTHO05D006860 1.1e-60 237.7 239 55.6
Gohir.D10G111000 Gossypium hirsutum HOM05D000219 ORTHO05D006860 1.9e-60 236.9 241 56.4
Gorai.011G122400 Gossypium raimondii HOM05D000219 ORTHO05D006860 1.9e-60 236.9 241 56.4
MD00G1129200 Malus domestica HOM05D000219 ORTHO05D006860 1.9e-60 236.9 241 54.4
TWI79G1643 Tripterygium wilfordii HOM05D000219 ORTHO05D006860 1.9e-60 236.9 241 56.4
Sp2g26710 Schrenkiella parvula HOM05D000219 ORTHO05D006860 3.3e-60 236.1 241 55.2
Gohir.A10G154900 Gossypium hirsutum HOM05D000219 ORTHO05D006860 4.3e-60 235.7 241 56.0
CANSAT80G0242 Cannabis sativa HOM05D000219 ORTHO05D006860 1.3e-59 234.2 241 53.5
PGR142G1791 Punica granatum HOM05D000219 ORTHO05D006860 1.3e-59 234.2 239 55.2
Duzib147G0918 Durio zibethinus HOM05D000219 ORTHO05D006860 2.8e-59 233.0 241 54.8
Nn1g08449 Nelumbo nucifera HOM05D000219 ORTHO05D006860 2.8e-59 233.0 241 55.6
FAN26G2023 Fragaria x ananassa HOM05D000219 ORTHO05D006860 8.1e-59 231.5 241 53.5
FAN28G2501 Fragaria x ananassa HOM05D000219 ORTHO05D006860 1.8e-58 230.3 241 53.1
QL10p038869 Quercus lobata HOM05D000219 ORTHO05D006860 1.8e-58 230.3 239 54.8
FvH4_1g25480 Fragaria vesca HOM05D000219 ORTHO05D006860 2.4e-58 229.9 241 53.1
Hma1.2p1_0057F.1_g032090 Hydrangea macrophylla HOM05D000219 ORTHO05D006860 1.2e-57 227.6 241 54.8
Actinidia35957 Actinidia chinensis HOM05D000219 ORTHO05D006860 4.4e-57 225.7 241 53.9
Cc04_g09500 Coffea canephora HOM05D000219 ORTHO05D006860 7.6e-57 224.9 241 53.9
Dinv16804 Davidia involucrata HOM05D009734 ORTHO05D012100 7.6e-57 224.9 238 54.2
Migut.H00794 Erythranthe guttata HOM05D000219 ORTHO05D006860 1.7e-56 223.8 241 53.9
Lsat_1_v5_gn_8_133760 Lactuca sativa HOM05D000219 ORTHO05D006860 1.7e-56 223.8 241 53.5
DCAR_006648 Daucus carota HOM05D000219 ORTHO05D006860 2.9e-56 223.0 240 53.8
Lj4A816G40 Lonicera japonica HOM05D000219 ORTHO05D006860 2.9e-56 223.0 241 53.5
Hund22176 Selenicereus undatus HOM05D000219 ORTHO05D006860 2.9e-56 223.0 239 52.3
MSTRG.23502 Avicennia marina HOM05D000219 ORTHO05D006860 4.9e-56 222.2 241 53.1
PSO017G4982 Papaver somniferum HOM05D000219 ORTHO05D006860 8.4e-56 221.5 241 53.1
HanXRQChr17g0555771 Helianthus annuus HOM05D000219 ORTHO05D006860 1.1e-55 221.1 241 53.1
Aa31LG1G18290 Aethionema arabicum HOM05D000219 ORTHO05D006860 1.4e-55 220.7 239 51.5
Peaxi162Scf00525g00058 Petunia axillaris HOM05D000219 ORTHO05D006860 1.4e-55 220.7 241 52.7
ATR1136G037 Amborella trichopoda HOM05D000219 ORTHO05D006860 1.9e-55 220.3 241 52.7
SGA_v2.0_scaffold54G19580 Striga asiatica HOM05D000219 ORTHO05D006860 2.4e-55 219.9 241 53.1
unitig_62.g23446 Utricularia gibba HOM05D000219 ORTHO05D006860 5.4e-55 218.8 241 52.3
TAR362G0321 Trochodendron aralioides HOM05D000219 ORTHO05D006860 7.1e-55 218.4 241 52.3
Nitab4.5_0002704g0020 Nicotiana tabacum HOM05D000219 ORTHO05D006860 1.2e-54 217.6 241 52.3
Haze_25420 Corylus avellana HOM05D000219 ORTHO05D006860 1.6e-54 217.2 241 54.8
Aqoxy5G02644 Aquilegia oxysepala HOM05D000219 ORTHO05D006860 2.7e-54 216.5 241 51.0
Ah.04g163090 Amaranthus hybridus HOM05D000219 ORTHO05D006860 7.9e-54 214.9 239 51.9
AUR62004811 Chenopodium quinoa HOM05D000219 ORTHO05D006860 1.0e-53 214.5 239 51.5
CAN.G1464.10 Capsicum annuum HOM05D000219 ORTHO05D006860 1.3e-53 214.2 241 52.3
Nitab4.5_0000496g0010 Nicotiana tabacum HOM05D000219 ORTHO05D006860 1.3e-53 214.2 241 51.9
vmacro00498 Vaccinium macrocarpon HOM05D000219 ORTHO05D006860 1.3e-53 214.2 281 47.7
Zm00001eb174190 Zea mays HOM05D000219 ORTHO05D006860 1.7e-53 213.8 240 50.8
Sc09g0004320 Simmondsia chinensis HOM05D000219 ORTHO05D006860 3.0e-53 213.0 266 48.5
Zm00001eb260390 Zea mays HOM05D000219 ORTHO05D006860 5.1e-53 212.2 240 50.0
Os08g0109200 Oryza sativa ssp. japonica HOM05D000219 ORTHO05D006860 6.6e-53 211.8 240 49.6
EL10Ac4g08974 Beta vulgaris HOM05D000219 ORTHO05D006860 8.7e-53 211.5 239 50.2
PGSC0003DMG400023319 Solanum tuberosum HOM05D000219 ORTHO05D006860 1.3e-51 207.6 241 50.6
Sopen05g034940 Solanum pennellii HOM05D000219 ORTHO05D006860 1.6e-51 207.2 241 50.2
Solyc05g056540.4 Solanum lycopersicum HOM05D000219 ORTHO05D006860 3.6e-51 206.1 241 49.8
AUR62036030 Chenopodium quinoa HOM05D000219 ORTHO05D006860 8.1e-51 204.9 234 50.9
Zm00001eb282680 Zea mays HOM05D000219 ORTHO05D006860 8.1e-51 204.9 240 48.3
ClCG04G003090 Citrullus lanatus HOM05D000219 ORTHO05D006860 2.4e-50 203.4 239 47.3
Prupe.4G281800 Prunus persica HOM05D000219 ORTHO05D006860 2.2e-48 196.8 241 47.7
Zm00001eb270900 Zea mays HOM05D000219 ORTHO05D006860 3.8e-48 196.1 235 48.1
SEGI_31178 Sequoiadendron giganteum HOM05D000219 ORTHO05D006860 1.6e-43 180.6 237 44.7
SMO353G0118 Selaginella moellendorffii HOM05D000219 ORTHO05D006860 1.8e-42 177.2 238 42.4
Mapoly0014s0120 Marchantia polymorpha HOM05D000219 ORTHO05D006860 7.6e-41 171.8 239 41.0
BcaB04g19937 Brassica carinata HOM05D000219 ORTHO05D006860 4.2e-39 166.0 250 45.6
CDE04G0033 Ceratophyllum demersum HOM05D000219 ORTHO05D006860 2.5e-36 156.8 109 67.9
Sabra15G0065100 Salix brachista HOM05D000219 ORTHO05D006860 5.3e-34 149.1 85 92.9
Sabra11G0076000 Salix brachista HOM05D004685 ORTHO05D005412 2.6e-33 146.7 238 44.1
CiPaw.03G253400 Carya illinoinensis HOM05D000219 ORTHO05D006860 2.5e-31 140.2 178 49.4
MELO3C003251.2 Cucumis melo HOM05D000219 ORTHO05D006860 3.2e-31 139.8 177 49.7
Rhsim09G0052100 Rhododendron simsii HOM05D000219 ORTHO05D006860 9.3e-31 138.3 178 46.6
C09p09460 Brassica napus HOM05D000219 ORTHO05D006860 6.7e-29 132.1 102 67.6
Zm00001eb282670 Zea mays HOM05D000219 ORTHO05D006860 1.7e-24 117.5 175 41.7
Sabra11G0080800 Salix brachista HOM05D000219 ORTHO05D006860 2.7e-22 110.2 180 43.9
Sabra11G0075600 Salix brachista HOM05D000219 ORTHO05D006860 3.6e-22 109.8 95 65.3
BraA09t36487Z Brassica rapa HOM05D000219 ORTHO05D006860 2.3e-21 107.1 66 78.8
ECA232G1642 Erigeron canadensis HOM05D000219 ORTHO05D006860 2.0e-17 94.0 60 75.0
Rhsim09G0052000 Rhododendron simsii HOM05D000219 ORTHO05D006860 4.5e-17 92.8 64 70.3
Actinidia34630 Actinidia chinensis HOM05D000219 ORTHO05D006860 1.7e-16 90.9 55 80.0
Sabra19G0008900 Salix brachista HOM05D031670 ORTHO05D009522 8.5e-16 88.6 46 97.8
CDE04G1888 Ceratophyllum demersum HOM05D000592 ORTHO05D000900 1.6e-14 84.3 63 61.9
Hma1.2p1_0057F.1_g032100 Hydrangea macrophylla HOM05D000219 ORTHO05D006860 6.7e-13 79.0 50 78.0
ECA232G1898 Erigeron canadensis HOM05D000219 ORTHO05D006860 1.5e-12 77.8 143 37.1
SHI11417 Sapria himalayana HOM05D000219 ORTHO05D006860 5.7e-12 75.9 53 71.7
Sabra19G0043500 Salix brachista HOM05D013017 ORTHO05D000047 1.3e-11 74.7 60 65.0
Sabra19G0046700 Salix brachista HOM05D013017 ORTHO05D000047 1.7e-11 74.3 40 87.5
BcaC07g40812 Brassica carinata HOM05D000701 ORTHO05D006860 5.9e-09 65.9 86 45.3
BcaC08g44216 Brassica carinata HOM05D000219 ORTHO05D006860 5.9e-09 65.9 87 46.0
CDE04G0283 Ceratophyllum demersum HOM05D000219 ORTHO05D006860 5.9e-09 65.9 47 68.1
BcaC02g09907 Brassica carinata HOM05D000219 ORTHO05D006860 1.0e-08 65.1 87 43.7
C04p35300 Brassica napus HOM05D000219 ORTHO05D006860 1.0e-08 65.1 87 43.7
BolC4t25084H Brassica oleracea HOM05D000219 ORTHO05D006860 1.0e-08 65.1 87 43.7
Os07g0621800 Oryza sativa ssp. japonica HOM05D000219 ORTHO05D000226 2.2e-08 63.9 115 33.9
HPP92_003770 Vanilla planifolia HOM05D000219 ORTHO05D006860 2.9e-08 63.5 48 64.6
BolC8t48825H Brassica oleracea HOM05D000219 ORTHO05D006860 1.2e-06 58.2 40 72.5
Pp3c10_670 Physcomitrium patens HOM05D000219 ORTHO05D006860 1.2e-06 58.2 50 56.0
QL09p015404 Quercus lobata HOM05D002642 ORTHO05D002834 1.6e-06 57.8 126 24.6
TWI56G0466 Tripterygium wilfordii HOM05D000219 ORTHO05D000226 1.6e-06 57.8 113 35.4
TWI56G1473 Tripterygium wilfordii HOM05D000219 ORTHO05D000226 1.6e-06 57.8 113 37.2
TWI14G0852 Tripterygium wilfordii HOM05D002642 ORTHO05D002834 2.1e-06 57.4 112 29.5
Aa31LG7G6360 Aethionema arabicum HOM05D000219 ORTHO05D000226 2.7e-06 57.0 114 31.6
Actinidia10342 Actinidia chinensis HOM05D000219 ORTHO05D000226 6.1e-06 55.8 119 33.6
Thhalv10025421m.g Eutrema salsugineum HOM05D000219 ORTHO05D000226 8.0e-06 55.5 113 38.1


User provided reference genes

Program Settings