Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0128500 Salix brachista HOM05D008171 ORTHO05D006541 2.4e-113 412.1 205 100.0
Potri.018G147100 Populus trichocarpa HOM05D008729 ORTHO05D006541 3.4e-91 338.6 214 81.8
Potri.004G028100 Populus trichocarpa HOM05D008171 ORTHO05D006541 6.3e-37 158.3 206 51.0
Sabra04G0016000 Salix brachista HOM05D008171 ORTHO05D006541 4.1e-36 155.6 235 48.5
Manes.03G156600 Manihot esculenta HOM05D008171 ORTHO05D006541 1.3e-29 134.0 229 41.9
Duzib177G0581 Durio zibethinus HOM05D008171 ORTHO05D006541 1.9e-25 120.2 199 40.7
TWI09G1485 Tripterygium wilfordii HOM05D008171 ORTHO05D006541 1.6e-24 117.1 178 43.8
TWI09G0902 Tripterygium wilfordii HOM05D008171 ORTHO05D006541 4.4e-22 109.0 172 43.6
Atru.chr3.807 Acer truncatum HOM05D008171 ORTHO05D006541 1.7e-21 107.1 161 45.3
Dinv29788 Davidia involucrata HOM05D008171 ORTHO05D006541 3.7e-21 105.9 174 42.0
Gohir.A11G241700 Gossypium hirsutum HOM05D008171 ORTHO05D006541 2.4e-20 103.2 162 43.2
Gorai.007G269300 Gossypium raimondii HOM05D008171 ORTHO05D006541 9.1e-20 101.3 197 39.1
Actinidia31699 Actinidia chinensis HOM05D008171 ORTHO05D006541 1.2e-19 100.9 180 37.2
Gohir.D11G251100 Gossypium hirsutum HOM05D008171 ORTHO05D006541 3.5e-19 99.4 197 38.6
Migut.N00307 Erythranthe guttata HOM05D014524 ORTHO05D006541 2.3e-18 96.7 119 42.9
MSTRG.14227 Avicennia marina HOM05D014524 ORTHO05D006541 2.9e-18 96.3 149 40.3
Cc03_g06490 Coffea canephora HOM05D008171 ORTHO05D006541 2.9e-18 96.3 220 32.7
COL.COLO4_08914 Corchorus olitorius HOM05D008171 ORTHO05D006541 1.5e-17 94.0 199 37.2
Dinv43748 Davidia involucrata HOM05D008729 ORTHO05D006541 1.5e-17 94.0 161 36.6
Rhsim06G0142400 Rhododendron simsii HOM05D008729 ORTHO05D006541 3.2e-17 92.8 195 38.5
Rhsim07G0050800 Rhododendron simsii HOM05D008171 ORTHO05D006541 5.5e-17 92.0 190 37.4
Thecc.04G268400 Theobroma cacao HOM05D008171 ORTHO05D006541 5.5e-17 92.0 169 39.1
SalBow8G4971 Salvia bowleyana HOM05D014524 ORTHO05D006541 7.2e-17 91.7 128 42.2
Glyma.18G253500 Glycine max HOM05D008729 ORTHO05D006541 3.6e-16 89.4 173 38.2
SGA_v2.0_scaffold31G12622 Striga asiatica HOM05D014524 ORTHO05D006541 4.7e-16 89.0 163 37.4
PGSC0003DMG400000820 Solanum tuberosum HOM05D008171 ORTHO05D006541 6.1e-16 88.6 208 36.1
PGR119G2083 Punica granatum HOM05D008729 ORTHO05D006541 1.4e-15 87.4 121 40.5
Sopen05g005780 Solanum pennellii HOM05D008171 ORTHO05D006541 1.4e-15 87.4 99 49.5
CiPaw.01G175900 Carya illinoinensis HOM05D008171 ORTHO05D006541 1.8e-15 87.0 91 53.8
COL.COLO4_36427 Corchorus olitorius HOM05D008171 ORTHO05D006541 2.3e-15 86.7 135 43.0
COL.COLO4_37412 Corchorus olitorius HOM05D008171 ORTHO05D006541 8.8e-15 84.7 53 66.0
Cc00_g01630 Coffea canephora HOM05D008729 ORTHO05D006541 2.0e-14 83.6 98 44.9
Cpa.g.sc59.27 Carica papaya HOM05D008171 ORTHO05D006541 9.8e-14 81.3 214 30.4
QL06p021862 Quercus lobata HOM05D008171 ORTHO05D006541 1.3e-13 80.9 147 37.4
Lj1g0024023 Lotus japonicus HOM05D008729 ORTHO05D006541 1.7e-13 80.5 132 41.7
Nitab4.5_0004705g0050 Nicotiana tabacum HOM05D008171 ORTHO05D006541 1.7e-13 80.5 126 39.7
Thecc.05G282200 Theobroma cacao HOM05D008171 ORTHO05D006541 2.8e-13 79.7 66 54.5
VMungo1383G3710 Vigna mungo HOM05D008729 ORTHO05D006541 3.7e-13 79.3 163 36.2
SGA_v2.0_scaffold577G53017 Striga asiatica HOM05D014524 ORTHO05D006541 6.3e-13 78.6 150 34.7
Nitab4.5_0009780g0020 Nicotiana tabacum HOM05D008171 ORTHO05D006541 1.1e-12 77.8 115 39.1
Medtr4g072710 Medicago truncatula HOM05D008729 ORTHO05D006541 1.4e-12 77.4 208 29.8
Sed0013719 Sechium edule HOM05D008171 ORTHO05D006541 2.4e-12 76.6 174 33.9
Ca_04035_v3 Cicer arietinum L. HOM05D008729 ORTHO05D006541 3.1e-12 76.3 181 34.8
RcHm_v2.0_Chr4g0396051 Rosa chinensis HOM05D013250 ORTHO05D006541 3.1e-12 76.3 197 34.0
Eucgr.F04204 Eucalyptus grandis HOM05D008729 ORTHO05D006541 5.4e-12 75.5 142 33.1
Oeu061870.1 Olea europaea HOM05D008729 ORTHO05D006541 5.4e-12 75.5 114 38.6
Phvul.008G026200 Phaseolus vulgaris HOM05D008729 ORTHO05D006541 7.0e-12 75.1 172 34.3
Medtr5g069720 Medicago truncatula HOM05D008729 ORTHO05D006541 9.2e-12 74.7 208 29.3
ClCG09G011900 Citrullus lanatus HOM05D008171 ORTHO05D006541 2.0e-11 73.6 192 32.8
C04p17400 Brassica napus HOM05D008171 ORTHO05D006541 2.7e-11 73.2 133 34.6
BolC4t23290H Brassica oleracea HOM05D008171 ORTHO05D006541 2.7e-11 73.2 133 34.6
DCAR_002271 Daucus carota HOM05D008729 ORTHO05D006541 3.5e-11 72.8 166 34.9
Carub.0004s1355 Capsella rubella HOM05D008171 ORTHO05D006541 4.5e-11 72.4 179 29.6
FvH4_4g05130 Fragaria vesca HOM05D013250 ORTHO05D006541 4.5e-11 72.4 141 36.9
FAN12G1247 Fragaria x ananassa HOM05D013250 ORTHO05D006541 4.5e-11 72.4 142 38.0
FAN22G0719 Fragaria x ananassa HOM05D013250 ORTHO05D006541 5.9e-11 72.0 196 34.2
SalBow3G3100 Salvia bowleyana HOM05D014524 ORTHO05D006541 5.9e-11 72.0 117 38.5
Prupe.1G051700 Prunus persica HOM05D013250 ORTHO05D006541 1.0e-10 71.2 214 31.3
Thhalv10016999m.g Eutrema salsugineum HOM05D008171 ORTHO05D006541 1.3e-10 70.9 139 32.4
RcHm_v2.0_Chr4g0442521 Rosa chinensis HOM05D013250 ORTHO05D006541 1.7e-10 70.5 62 58.1
Medtr4g072520 Medicago truncatula HOM05D008729 ORTHO05D006541 2.3e-10 70.1 206 28.6
AT2G32235 Arabidopsis thaliana HOM05D008171 ORTHO05D006541 2.9e-10 69.7 147 34.0
BraA05t20241Z Brassica rapa HOM05D008171 ORTHO05D006541 2.9e-10 69.7 136 32.4
AL4G27600 Arabidopsis lyrata HOM05D008171 ORTHO05D006541 3.8e-10 69.3 179 30.7
BcaB02g10481 Brassica carinata HOM05D008171 ORTHO05D006541 3.8e-10 69.3 136 32.4
Phvul.008G045500 Phaseolus vulgaris HOM05D008729 ORTHO05D006541 3.8e-10 69.3 171 33.9
A05p13010 Brassica napus HOM05D008171 ORTHO05D006541 5.0e-10 68.9 136 32.4
Medtr4g072430 Medicago truncatula HOM05D008729 ORTHO05D006541 5.0e-10 68.9 214 26.6
Cfa014809 Carpinus fangiana HOM05D008171 ORTHO05D006541 1.1e-09 67.8 123 40.7
Lalb_Chr03g0040281 Lupinus albus HOM05D008729 ORTHO05D006541 1.1e-09 67.8 180 32.8
Haze_11490 Corylus avellana HOM05D008171 ORTHO05D006541 1.9e-09 67.0 139 38.1
FAN12G2236 Fragaria x ananassa HOM05D022272 ORTHO05D006541 1.9e-09 67.0 40 72.5
FAN17G0494 Fragaria x ananassa HOM05D022272 ORTHO05D006541 1.9e-09 67.0 40 72.5
MD13G1018300 Malus domestica HOM05D008171 ORTHO05D006541 7.3e-09 65.1 145 32.4
FAN22G1062 Fragaria x ananassa HOM05D022272 ORTHO05D006541 9.5e-09 64.7 38 71.1
FAN07G2840 Fragaria x ananassa HOM05D004513 ORTHO05D005459 1.2e-08 64.3 120 35.0
Medtr5g008380 Medicago truncatula HOM05D008729 ORTHO05D006541 1.2e-08 64.3 179 29.6
TPR.G6386 Trifolium pratense HOM05D008729 ORTHO05D006541 2.1e-08 63.5 106 34.9
FAN07G0121 Fragaria x ananassa HOM05D022272 ORTHO05D006541 2.8e-08 63.2 118 35.6
Medtr5g069420 Medicago truncatula HOM05D008729 ORTHO05D006541 2.8e-08 63.2 209 26.8
arahy.Tifrunner.gnm1.ann1.R8XUDN Arachis hypogaea HOM05D008729 ORTHO05D006541 3.6e-08 62.8 191 31.9
BcaB01g03996 Brassica carinata HOM05D008171 ORTHO05D006541 4.7e-08 62.4 176 29.5
Hma1.2p1_1240F.1_g269530 Hydrangea macrophylla HOM05D008729 ORTHO05D006541 4.7e-08 62.4 88 43.2
DCAR_027373 Daucus carota HOM05D008171 ORTHO05D006541 6.1e-08 62.0 217 32.3
Psat3g195600 Pisum sativum HOM05D008729 ORTHO05D006541 8.0e-08 61.6 145 33.8
CANSAT78G0015 Cannabis sativa HOM05D008171 ORTHO05D006541 1.0e-07 61.2 228 31.1
MD16G1230200 Malus domestica HOM05D013250 ORTHO05D006541 1.0e-07 61.2 163 31.3
FvH4_4g33320 Fragaria vesca HOM05D022272 ORTHO05D006541 1.8e-07 60.5 116 35.3
TPR.G16999 Trifolium pratense HOM05D008729 ORTHO05D006541 1.8e-07 60.5 150 28.7
Prupe.1G335500 Prunus persica HOM05D008171 ORTHO05D006541 2.3e-07 60.1 172 33.7
CARHR126020 Cardamine hirsuta HOM05D008171 ORTHO05D006541 3.0e-07 59.7 100 30.0
Medtr5g068870 Medicago truncatula HOM05D008729 ORTHO05D006541 4.0e-07 59.3 197 26.9
THA.LOC104826159 Tarenaya hassleriana HOM05D008171 ORTHO05D006541 5.2e-07 58.9 143 29.4
Aa31LG5G4300 Aethionema arabicum HOM05D008171 ORTHO05D006541 6.8e-07 58.5 147 29.3
Medtr5g069080 Medicago truncatula HOM05D008729 ORTHO05D006541 6.8e-07 58.5 41 56.1
SalBow3G0463 Salvia bowleyana HOM05D014524 ORTHO05D006541 6.8e-07 58.5 36 69.4
Sp4g14600 Schrenkiella parvula HOM05D008171 ORTHO05D006541 6.8e-07 58.5 48 45.8
Medtr7g007830 Medicago truncatula HOM05D008729 ORTHO05D006541 8.9e-07 58.2 119 31.1
BraA03t11066Z Brassica rapa HOM05D008171 ORTHO05D006541 1.2e-06 57.8 52 40.4
Medtr4g052440 Medicago truncatula HOM05D008729 ORTHO05D006541 1.2e-06 57.8 210 26.2
TPR.G30636 Trifolium pratense HOM05D008729 ORTHO05D006541 1.2e-06 57.8 42 54.8
MELO3C003414.2 Cucumis melo HOM05D008171 ORTHO05D006541 2.0e-06 57.0 94 33.0
CsaV3_3G049130 Cucumis sativus L. HOM05D008171 ORTHO05D006541 2.6e-06 56.6 182 31.9
arahy.Tifrunner.gnm1.ann1.YJLF6P Arachis hypogaea HOM05D008729 ORTHO05D006541 5.7e-06 55.5 192 29.7
C03p21100 Brassica napus HOM05D008171 ORTHO05D006541 5.7e-06 55.5 177 25.4
unitig_21.g20743 Utricularia gibba HOM05D050672 ORTHO05D006541 7.5e-06 55.1 72 38.9


User provided reference genes

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