Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0128200 Salix brachista HOM05D000690 ORTHO05D002679 1.4e-181 639.4 316 100.0
Sabra18G0121100 Salix brachista HOM05D000690 ORTHO05D002679 1.9e-149 532.7 328 85.1
Potri.018G146800 Populus trichocarpa HOM05D000690 ORTHO05D002679 2.5e-109 399.4 316 68.4
Potri.006G078300 Populus trichocarpa HOM05D000690 ORTHO05D002679 1.9e-88 330.1 322 59.9
Sabra06G0059200 Salix brachista HOM05D000690 ORTHO05D002679 1.3e-78 297.4 323 55.7
TWI34G1037 Tripterygium wilfordii HOM05D000690 ORTHO05D002679 1.4e-43 181.0 312 39.1
Prupe.1G064600 Prunus persica HOM05D000690 ORTHO05D002679 1.2e-42 177.9 319 40.8
Haze_19104 Corylus avellana HOM05D000690 ORTHO05D002679 3.4e-42 176.4 322 40.1
MD16G1238400 Malus domestica HOM05D000690 ORTHO05D002679 7.7e-42 175.3 317 39.4
RcHm_v2.0_Chr4g0397681 Rosa chinensis HOM05D000690 ORTHO05D002679 2.9e-41 173.3 318 39.6
CiPaw.15G156500 Carya illinoinensis HOM05D000690 ORTHO05D002679 5.0e-41 172.6 321 38.9
Thecc.09G195800 Theobroma cacao HOM05D000690 ORTHO05D002679 8.5e-41 171.8 321 38.0
Cfa020749 Carpinus fangiana HOM05D000690 ORTHO05D002679 1.1e-40 171.4 322 39.1
CiPaw.16G103700 Carya illinoinensis HOM05D000690 ORTHO05D002679 9.4e-40 168.3 315 38.4
FvH4_4g06100 Fragaria vesca HOM05D000690 ORTHO05D002679 2.1e-39 167.2 317 39.4
FAN12G4257 Fragaria x ananassa HOM05D000690 ORTHO05D002679 2.1e-39 167.2 317 39.4
FAN22G0604 Fragaria x ananassa HOM05D000690 ORTHO05D002679 1.0e-38 164.9 317 38.8
CANSAT80G0586 Cannabis sativa HOM05D000690 ORTHO05D002679 1.4e-38 164.5 329 37.7
FAN17G1426 Fragaria x ananassa HOM05D000690 ORTHO05D002679 8.8e-38 161.8 317 38.5
MD13G1233400 Malus domestica HOM05D000690 ORTHO05D002679 8.8e-38 161.8 317 36.6
FAN07G2002 Fragaria x ananassa HOM05D000690 ORTHO05D002679 5.7e-37 159.1 317 38.5
DCAR_020463 Daucus carota HOM05D000690 ORTHO05D002679 8.5e-33 145.2 337 36.5
Atru.chr7.957 Acer truncatum HOM05D000690 ORTHO05D002679 1.1e-32 144.8 314 35.4
QL11p008788 Quercus lobata HOM05D000690 ORTHO05D002679 1.9e-32 144.1 319 36.1
GSVIVG01032258001 Vitis vinifera HOM05D000690 ORTHO05D002679 2.7e-31 140.2 351 33.9
Dinv12609 Davidia involucrata HOM05D000690 ORTHO05D002679 1.8e-30 137.5 334 35.0
ClCG11G011410 Citrullus lanatus HOM05D000690 ORTHO05D002679 2.3e-30 137.1 317 37.5
DCAR_009045 Daucus carota HOM05D000690 ORTHO05D002679 2.3e-30 137.1 337 34.4
Actinidia02479 Actinidia chinensis HOM05D000690 ORTHO05D002679 3.0e-30 136.7 319 34.5
CsaV3_2G009080 Cucumis sativus L. HOM05D000690 ORTHO05D002679 6.7e-30 135.6 316 35.4
Ciclev10009331m.g Citrus clementina HOM05D000690 ORTHO05D002679 1.1e-29 134.8 320 34.4
MELO3C003931.2 Cucumis melo HOM05D000690 ORTHO05D002679 1.1e-29 134.8 316 35.4
Actinidia07569 Actinidia chinensis HOM05D000690 ORTHO05D002679 9.7e-29 131.7 320 34.4
vmacro22699 Vaccinium macrocarpon HOM05D000690 ORTHO05D002679 1.8e-27 127.5 305 34.1
Sed0009416 Sechium edule HOM05D000690 ORTHO05D002679 4.1e-27 126.3 315 34.0
Lj5A749T42 Lonicera japonica HOM05D000690 ORTHO05D002679 7.7e-26 122.1 305 32.1
TAR383G0298 Trochodendron aralioides HOM05D000690 ORTHO05D002679 1.3e-25 121.3 331 32.3
Aqoxy7G02612 Aquilegia oxysepala HOM05D000690 ORTHO05D002679 8.5e-25 118.6 336 31.2
Solyc07g017220.3 Solanum lycopersicum HOM05D000690 ORTHO05D002679 1.1e-24 118.2 318 32.4
Sopen00g005940 Solanum pennellii HOM05D000690 ORTHO05D002679 2.5e-24 117.1 317 31.9
MBI16_g00846_MAGBIO Magnolia biondii HOM05D000690 ORTHO05D002679 5.5e-24 115.9 330 30.3
Hma1.2p1_0314F.1_g122000 Hydrangea macrophylla HOM05D000690 ORTHO05D002679 8.0e-23 112.1 305 32.5
PGSC0003DMG400009560 Solanum tuberosum HOM05D000690 ORTHO05D002679 8.0e-23 112.1 321 31.2
CAN.G8.45 Capsicum annuum HOM05D000690 ORTHO05D002679 1.0e-22 111.7 303 30.4
unitig_578.g15827 Utricularia gibba HOM05D000690 ORTHO05D002679 2.3e-22 110.5 315 31.4
PGSC0003DMG400020401 Solanum tuberosum HOM05D000690 ORTHO05D002679 3.4e-21 106.7 292 31.5
Gohir.A03G021300 Gossypium hirsutum HOM05D000690 ORTHO05D002679 7.5e-21 105.5 188 41.5
Gohir.D03G147500 Gossypium hirsutum HOM05D000690 ORTHO05D002679 9.8e-21 105.1 188 41.0
Gorai.003G155000 Gossypium raimondii HOM05D000690 ORTHO05D002679 2.2e-20 104.0 314 31.8
Peaxi162Scf00320g00121 Petunia axillaris HOM05D000690 ORTHO05D002679 2.8e-20 103.6 328 29.3
Oeu028824.2 Olea europaea HOM05D000690 ORTHO05D002679 4.8e-20 102.8 317 30.3
HanXRQChr10g0309571 Helianthus annuus HOM05D000690 ORTHO05D002679 1.1e-19 101.7 327 28.7
HanXRQChr12g0359181 Helianthus annuus HOM05D000690 ORTHO05D002679 1.4e-19 101.3 299 29.4
Hma1.2p1_0263F.1_g105470 Hydrangea macrophylla HOM05D000690 ORTHO05D002679 2.4e-19 100.5 317 30.0
Lsat_1_v5_gn_5_81400 Lactuca sativa HOM05D000690 ORTHO05D002679 7.0e-19 99.0 314 28.7
Migut.J00837 Erythranthe guttata HOM05D000690 ORTHO05D002679 1.6e-18 97.8 295 31.9
ECA234G4314 Erigeron canadensis HOM05D000690 ORTHO05D002679 2.7e-18 97.1 330 28.2
Rhsim01G0110200 Rhododendron simsii HOM05D000690 ORTHO05D002679 2.7e-18 97.1 218 35.8
Sopen12g008660 Solanum pennellii HOM05D000690 ORTHO05D002679 4.5e-18 96.3 294 29.9
ATR0626G267 Amborella trichopoda HOM05D000690 ORTHO05D002679 5.9e-18 95.9 288 29.2
Solyc12g017850.2 Solanum lycopersicum HOM05D000690 ORTHO05D002679 5.9e-18 95.9 294 29.9
Nitab4.5_0005753g0020 Nicotiana tabacum HOM05D000690 ORTHO05D002679 4.2e-16 89.7 314 26.1
Nitab4.5_0000219g0120 Nicotiana tabacum HOM05D000690 ORTHO05D002679 2.7e-15 87.0 317 25.6
Cfa010120 Carpinus fangiana HOM05D000690 ORTHO05D002679 6.1e-15 85.9 130 43.1
SalBow6G0007 Salvia bowleyana HOM05D000690 ORTHO05D002679 1.8e-14 84.3 298 27.5
Cc00_g00160 Coffea canephora HOM05D000690 ORTHO05D000388 3.0e-14 83.6 212 32.1
Lj5A765T48 Lonicera japonica HOM05D000690 ORTHO05D002679 3.0e-14 83.6 306 28.1
Peaxi162Scf00006g03310 Petunia axillaris HOM05D000690 ORTHO05D002679 3.0e-14 83.6 312 27.9
Sed0015173 Sechium edule HOM05D000690 ORTHO05D002679 3.0e-14 83.6 186 38.7
MBI19_g29875_MAGBIO Magnolia biondii HOM05D000690 ORTHO05D002679 1.2e-13 81.6 306 26.8
TAR383G0827 Trochodendron aralioides HOM05D000690 ORTHO05D002679 1.2e-13 81.6 127 42.5
Cfa009294 Carpinus fangiana HOM05D000690 ORTHO05D002679 2.0e-13 80.9 137 40.9
Nitab4.5_0001535g0010 Nicotiana tabacum HOM05D000690 ORTHO05D002679 2.0e-13 80.9 213 30.5
CDE02G0199 Ceratophyllum demersum HOM05D000690 ORTHO05D002679 4.4e-13 79.7 178 34.8
HPP92_010416 Vanilla planifolia HOM05D000690 ORTHO05D000388 9.8e-13 78.6 176 38.6
HPP92_010800 Vanilla planifolia HOM05D000690 ORTHO05D000388 1.7e-12 77.8 176 33.5
CDE05G0061 Ceratophyllum demersum HOM05D000690 ORTHO05D002679 2.8e-12 77.0 218 31.7
Glyma.17G047500 Glycine max HOM05D000690 ORTHO05D002679 6.3e-12 75.9 297 26.9
Atru.chr7.1742 Acer truncatum HOM05D000690 ORTHO05D002679 1.4e-11 74.7 298 26.5
CDE05G1367 Ceratophyllum demersum HOM05D000690 ORTHO05D002679 1.8e-11 74.3 219 32.4
Aqoxy7G01008 Aquilegia oxysepala HOM05D000690 ORTHO05D002679 4.1e-11 73.2 305 26.2
PGR044G0133 Punica granatum HOM05D000690 ORTHO05D002679 7.0e-11 72.4 195 27.7
MD02G1096300 Malus domestica HOM05D000690 ORTHO05D002679 3.5e-10 70.1 291 27.5
Os02g0174800 Oryza sativa ssp. japonica HOM05D000690 ORTHO05D002679 3.5e-10 70.1 309 27.2
arahy.Tifrunner.gnm1.ann1.GQ96QH Arachis hypogaea HOM05D000690 ORTHO05D002679 2.3e-09 67.4 170 34.7
arahy.Tifrunner.gnm1.ann1.NJE7MY Arachis hypogaea HOM05D000690 ORTHO05D002679 2.3e-09 67.4 163 35.6
Lalb_Chr08g0232731 Lupinus albus HOM05D000690 ORTHO05D002679 2.3e-09 67.4 287 25.8
TAR624G0399 Trochodendron aralioides HOM05D000690 ORTHO05D002679 3.8e-09 66.6 278 27.3
Medtr4g124930 Medicago truncatula HOM05D000690 ORTHO05D002679 5.0e-09 66.2 296 25.3
Oeu025292.1 Olea europaea HOM05D000690 ORTHO05D002679 5.0e-09 66.2 297 25.6
Manes.03G042600 Manihot esculenta HOM05D000690 ORTHO05D002679 6.6e-09 65.9 299 27.1
Nn8g38579 Nelumbo nucifera HOM05D000690 ORTHO05D002679 6.6e-09 65.9 337 25.8
Glyma.09G071800 Glycine max HOM05D000690 ORTHO05D002679 8.6e-09 65.5 306 23.9
Phvul.009G225200 Phaseolus vulgaris HOM05D000690 ORTHO05D002679 8.6e-09 65.5 297 22.9
Prupe.7G194600 Prunus persica HOM05D000690 ORTHO05D002679 8.6e-09 65.5 294 26.2
Lj6g0020365 Lotus japonicus HOM05D000690 ORTHO05D002679 1.1e-08 65.1 290 24.1
Nn6g35673 Nelumbo nucifera HOM05D000690 ORTHO05D002679 1.1e-08 65.1 299 27.8
TWI34G1591 Tripterygium wilfordii HOM05D000690 ORTHO05D002679 1.1e-08 65.1 286 25.9
FAN19G2614 Fragaria x ananassa HOM05D000690 ORTHO05D002679 1.5e-08 64.7 291 27.5
CANSAT56G1930 Cannabis sativa HOM05D000690 ORTHO05D002679 1.9e-08 64.3 300 26.7
QL11p001312 Quercus lobata HOM05D000690 ORTHO05D002679 1.9e-08 64.3 304 25.7
SGA_v2.0_scaffold297G47587 Striga asiatica HOM05D000690 ORTHO05D002679 1.9e-08 64.3 170 30.0
Ca_09314_v3 Cicer arietinum L. HOM05D000690 ORTHO05D002679 3.3e-08 63.5 300 26.0
FvH4_1g09090 Fragaria vesca HOM05D000690 ORTHO05D002679 3.3e-08 63.5 284 26.8
GSVIVG01015039001 Vitis vinifera HOM05D000690 ORTHO05D002679 3.3e-08 63.5 309 25.6
arahy.Tifrunner.gnm1.ann1.2P95X7 Arachis hypogaea HOM05D000690 ORTHO05D002679 7.2e-08 62.4 147 29.9
arahy.Tifrunner.gnm1.ann1.DM1378 Arachis hypogaea HOM05D000690 ORTHO05D002679 7.2e-08 62.4 147 29.9
FAN26G0308 Fragaria x ananassa HOM05D000690 ORTHO05D002679 7.2e-08 62.4 290 27.2
Lalb_Chr11g0074111 Lupinus albus HOM05D000690 ORTHO05D002679 7.2e-08 62.4 174 32.8
PGR142G1551 Punica granatum HOM05D000690 ORTHO05D002679 7.2e-08 62.4 288 26.7
TAR468G0001 Trochodendron aralioides HOM05D000690 ORTHO05D002679 7.2e-08 62.4 310 26.8
vmacro06352 Vaccinium macrocarpon HOM05D000690 ORTHO05D002679 7.2e-08 62.4 176 35.8
FAN28G2744 Fragaria x ananassa HOM05D000690 ORTHO05D002679 9.5e-08 62.0 288 26.4
Ciclev10009353m.g Citrus clementina HOM05D000690 ORTHO05D002679 1.2e-07 61.6 284 25.0
Eucgr.C03298 Eucalyptus grandis HOM05D000690 ORTHO05D002679 1.2e-07 61.6 299 25.4
MD15G1220800 Malus domestica HOM05D000690 ORTHO05D002679 1.6e-07 61.2 170 32.9
Cpa.g.sc28.8 Carica papaya HOM05D000690 ORTHO05D002679 2.1e-07 60.8 285 26.7
FAN28G2832 Fragaria x ananassa HOM05D000690 ORTHO05D002679 2.1e-07 60.8 289 27.0
Oeu060634.2 Olea europaea HOM05D000690 ORTHO05D002679 2.1e-07 60.8 282 25.2
HPP92_017377 Vanilla planifolia HOM05D000690 ORTHO05D002679 2.1e-07 60.8 87 40.2
Zm00001eb233410 Zea mays HOM05D000690 ORTHO05D002679 2.1e-07 60.8 220 27.7
Manes.16G093000 Manihot esculenta HOM05D000690 ORTHO05D002679 2.8e-07 60.5 171 32.7
Sp1g17100 Schrenkiella parvula HOM05D000690 ORTHO05D002679 2.8e-07 60.5 172 31.4
FAN23G0675 Fragaria x ananassa HOM05D000690 ORTHO05D002679 3.6e-07 60.1 289 27.0
Glyma.13G112200 Glycine max HOM05D000690 ORTHO05D002679 3.6e-07 60.1 306 24.5
AL1G31780 Arabidopsis lyrata HOM05D000690 ORTHO05D002679 4.7e-07 59.7 162 30.9
BcaB08g36520 Brassica carinata HOM05D000690 ORTHO05D002679 4.7e-07 59.7 284 26.8
CARHR019800 Cardamine hirsuta HOM05D000690 ORTHO05D002679 4.7e-07 59.7 175 30.9
Psat4g018960 Pisum sativum HOM05D000690 ORTHO05D002679 4.7e-07 59.7 171 31.0
Cc00_g22710 Coffea canephora HOM05D000690 ORTHO05D002679 6.1e-07 59.3 286 26.2
Migut.L01583 Erythranthe guttata HOM05D000690 ORTHO05D002679 6.1e-07 59.3 302 25.2
FAN26G2648 Fragaria x ananassa HOM05D000690 ORTHO05D002679 6.1e-07 59.3 290 26.9
Glyma.15G179800 Glycine max HOM05D000690 ORTHO05D002679 6.1e-07 59.3 315 22.9
Rhsim05G0004600 Rhododendron simsii HOM05D000690 ORTHO05D002679 6.1e-07 59.3 309 24.9
Sc08g0009030 Simmondsia chinensis HOM05D000690 ORTHO05D002679 6.1e-07 59.3 164 31.7
PSO386G0242 Papaver somniferum HOM05D000690 ORTHO05D002679 8.0e-07 58.9 226 27.4
PSO421G0334 Papaver somniferum HOM05D000690 ORTHO05D002679 8.0e-07 58.9 179 31.8
arahy.Tifrunner.gnm1.ann1.I4UMUP Arachis hypogaea HOM05D000690 ORTHO05D002679 1.0e-06 58.5 307 22.1
COL.COLO4_18062 Corchorus olitorius HOM05D000690 ORTHO05D002679 1.0e-06 58.5 309 24.9
PSO724G1067 Papaver somniferum HOM05D000690 ORTHO05D002679 1.0e-06 58.5 220 26.8
VMungo1309G2086 Vigna mungo HOM05D000690 ORTHO05D002679 1.0e-06 58.5 306 22.9
MSTRG.26484 Avicennia marina HOM05D000690 ORTHO05D002679 1.8e-06 57.8 177 32.8
BNapus_Darmor_BZH_scaffold_38p01380 Brassica napus HOM05D000690 ORTHO05D002679 1.8e-06 57.8 161 31.1
BraA02t05589Z Brassica rapa HOM05D000690 ORTHO05D002679 1.8e-06 57.8 161 31.1
Cfa002961 Carpinus fangiana HOM05D000690 ORTHO05D002679 1.8e-06 57.8 309 25.6
Sabra06G0108800 Salix brachista HOM05D000690 ORTHO05D002679 1.8e-06 57.8 317 24.0
TPR.G12617 Trifolium pratense HOM05D000690 ORTHO05D002679 1.8e-06 57.8 299 26.1
arahy.Tifrunner.gnm1.ann1.ZM2HAN Arachis hypogaea HOM05D000690 ORTHO05D002679 2.3e-06 57.4 306 22.2
BcaC03g13791 Brassica carinata HOM05D000690 ORTHO05D002679 2.3e-06 57.4 163 30.7
Duzib150G1085 Durio zibethinus HOM05D000690 ORTHO05D002679 3.0e-06 57.0 295 25.4
Hma1.2p1_0171F.1_g075660 Hydrangea macrophylla HOM05D000690 ORTHO05D002679 3.0e-06 57.0 109 36.7
Peaxi162Scf00418g00036 Petunia axillaris HOM05D000690 ORTHO05D002679 3.0e-06 57.0 281 23.8
Haze_26041 Corylus avellana HOM05D000690 ORTHO05D002679 4.0e-06 56.6 303 26.7
CsaV3_1G041300 Cucumis sativus L. HOM05D000690 ORTHO05D002679 4.0e-06 56.6 299 24.7
Duzib168G1432 Durio zibethinus HOM05D000690 ORTHO05D002679 4.0e-06 56.6 313 24.9
Lj4A916T19 Lonicera japonica HOM05D000690 ORTHO05D002679 4.0e-06 56.6 172 30.2
Peaxi162Scf00533g00815 Petunia axillaris HOM05D000690 ORTHO05D002679 4.0e-06 56.6 285 25.3
Hund26063 Selenicereus undatus HOM05D000690 ORTHO05D002679 4.0e-06 56.6 194 30.9
Actinidia30244 Actinidia chinensis HOM05D000690 ORTHO05D002679 5.2e-06 56.2 311 25.7
CSS0019997 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D002679 5.2e-06 56.2 310 25.8
Carub.0006s1904 Capsella rubella HOM05D000690 ORTHO05D002679 5.2e-06 56.2 173 32.4
PSO421G0213 Papaver somniferum HOM05D000690 ORTHO05D002679 5.2e-06 56.2 181 30.4
Phvul.003G129000 Phaseolus vulgaris HOM05D000690 ORTHO05D002679 5.2e-06 56.2 291 24.4
AL6G32260 Arabidopsis lyrata HOM05D000690 ORTHO05D002679 6.8e-06 55.8 278 24.5
TAR626G1114 Trochodendron aralioides HOM05D000690 ORTHO05D002679 6.8e-06 55.8 296 27.0
vmacro17108 Vaccinium macrocarpon HOM05D000690 ORTHO05D002679 6.8e-06 55.8 191 30.4
BcaC08g46927 Brassica carinata HOM05D000690 ORTHO05D002679 8.9e-06 55.5 166 33.7
C06p48950 Brassica napus HOM05D000690 ORTHO05D002679 8.9e-06 55.5 166 33.7
Nitab4.5_0001565g0010 Nicotiana tabacum HOM05D000690 ORTHO05D002679 8.9e-06 55.5 301 25.2


User provided reference genes

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