Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0121100 Salix brachista HOM05D000690 ORTHO05D002679 2.5e-181 638.6 318 100.0
Sabra18G0128200 Salix brachista HOM05D000690 ORTHO05D002679 8.6e-150 533.9 328 85.1
Potri.018G146800 Populus trichocarpa HOM05D000690 ORTHO05D002679 8.1e-108 394.4 318 67.3
Potri.006G078300 Populus trichocarpa HOM05D000690 ORTHO05D002679 6.0e-87 325.1 324 59.0
Sabra06G0059200 Salix brachista HOM05D000690 ORTHO05D002679 4.3e-77 292.4 325 54.8
TWI34G1037 Tripterygium wilfordii HOM05D000690 ORTHO05D002679 4.5e-42 176.0 314 38.2
Prupe.1G064600 Prunus persica HOM05D000690 ORTHO05D002679 3.8e-41 172.9 321 39.9
Haze_19104 Corylus avellana HOM05D000690 ORTHO05D002679 1.1e-40 171.4 324 39.2
MD16G1238400 Malus domestica HOM05D000690 ORTHO05D002679 2.5e-40 170.2 319 38.6
RcHm_v2.0_Chr4g0397681 Rosa chinensis HOM05D000690 ORTHO05D002679 9.4e-40 168.3 320 38.8
CiPaw.15G156500 Carya illinoinensis HOM05D000690 ORTHO05D002679 1.6e-39 167.5 323 38.1
Thecc.09G195800 Theobroma cacao HOM05D000690 ORTHO05D002679 2.7e-39 166.8 323 37.2
Cfa020749 Carpinus fangiana HOM05D000690 ORTHO05D002679 3.6e-39 166.4 324 38.3
CiPaw.16G103700 Carya illinoinensis HOM05D000690 ORTHO05D002679 3.0e-38 163.3 317 37.5
FvH4_4g06100 Fragaria vesca HOM05D000690 ORTHO05D002679 6.8e-38 162.2 319 38.6
FAN12G4257 Fragaria x ananassa HOM05D000690 ORTHO05D002679 6.8e-38 162.2 319 38.6
FAN22G0604 Fragaria x ananassa HOM05D000690 ORTHO05D002679 3.4e-37 159.8 319 37.9
CANSAT80G0586 Cannabis sativa HOM05D000690 ORTHO05D002679 4.4e-37 159.5 331 36.9
FAN17G1426 Fragaria x ananassa HOM05D000690 ORTHO05D002679 2.8e-36 156.8 319 37.6
MD13G1233400 Malus domestica HOM05D000690 ORTHO05D002679 2.8e-36 156.8 319 35.7
FAN07G2002 Fragaria x ananassa HOM05D000690 ORTHO05D002679 1.8e-35 154.1 319 37.6
DCAR_020463 Daucus carota HOM05D000690 ORTHO05D002679 2.1e-31 140.6 339 35.7
Atru.chr7.957 Acer truncatum HOM05D000690 ORTHO05D002679 2.8e-31 140.2 316 34.5
QL11p008788 Quercus lobata HOM05D000690 ORTHO05D002679 6.1e-31 139.0 321 35.2
GSVIVG01032258001 Vitis vinifera HOM05D000690 ORTHO05D002679 8.9e-30 135.2 353 33.1
Dinv12609 Davidia involucrata HOM05D000690 ORTHO05D002679 5.7e-29 132.5 336 34.2
Actinidia02479 Actinidia chinensis HOM05D000690 ORTHO05D002679 7.5e-29 132.1 321 33.6
ClCG11G011410 Citrullus lanatus HOM05D000690 ORTHO05D002679 7.5e-29 132.1 319 36.7
DCAR_009045 Daucus carota HOM05D000690 ORTHO05D002679 7.5e-29 132.1 339 33.6
CsaV3_2G009080 Cucumis sativus L. HOM05D000690 ORTHO05D002679 2.2e-28 130.6 318 34.6
Ciclev10009331m.g Citrus clementina HOM05D000690 ORTHO05D002679 3.7e-28 129.8 322 33.5
MELO3C003931.2 Cucumis melo HOM05D000690 ORTHO05D002679 3.7e-28 129.8 318 34.6
Actinidia07569 Actinidia chinensis HOM05D000690 ORTHO05D002679 3.1e-27 126.7 322 33.5
Sed0009416 Sechium edule HOM05D000690 ORTHO05D002679 1.0e-25 121.7 317 33.1
vmacro22699 Vaccinium macrocarpon HOM05D000690 ORTHO05D002679 1.3e-25 121.3 307 32.2
Lj5A749T42 Lonicera japonica HOM05D000690 ORTHO05D002679 2.5e-24 117.1 307 31.3
TAR383G0298 Trochodendron aralioides HOM05D000690 ORTHO05D002679 4.3e-24 116.3 333 31.5
Aqoxy7G02612 Aquilegia oxysepala HOM05D000690 ORTHO05D002679 2.1e-23 114.0 338 30.5
Solyc07g017220.3 Solanum lycopersicum HOM05D000690 ORTHO05D002679 2.8e-23 113.6 320 31.6
Sopen00g005940 Solanum pennellii HOM05D000690 ORTHO05D002679 6.1e-23 112.5 319 31.0
MBI16_g00846_MAGBIO Magnolia biondii HOM05D000690 ORTHO05D002679 1.8e-22 110.9 332 29.5
Hma1.2p1_0314F.1_g122000 Hydrangea macrophylla HOM05D000690 ORTHO05D002679 2.6e-21 107.1 307 31.6
PGSC0003DMG400009560 Solanum tuberosum HOM05D000690 ORTHO05D002679 2.6e-21 107.1 323 30.3
CAN.G8.45 Capsicum annuum HOM05D000690 ORTHO05D002679 3.4e-21 106.7 305 29.5
unitig_578.g15827 Utricularia gibba HOM05D000690 ORTHO05D002679 7.5e-21 105.5 317 30.6
Gohir.A03G021300 Gossypium hirsutum HOM05D000690 ORTHO05D002679 2.9e-20 103.6 192 40.6
Gorai.003G155000 Gossypium raimondii HOM05D000690 ORTHO05D002679 1.1e-19 101.7 192 40.1
PGSC0003DMG400020401 Solanum tuberosum HOM05D000690 ORTHO05D002679 1.1e-19 101.7 294 30.6
Gohir.D03G147500 Gossypium hirsutum HOM05D000690 ORTHO05D002679 1.9e-19 100.9 187 40.1
Peaxi162Scf00320g00121 Petunia axillaris HOM05D000690 ORTHO05D002679 9.2e-19 98.6 330 28.5
Oeu028824.2 Olea europaea HOM05D000690 ORTHO05D002679 1.6e-18 97.8 319 29.5
HanXRQChr10g0309571 Helianthus annuus HOM05D000690 ORTHO05D002679 2.7e-18 97.1 329 28.0
HanXRQChr12g0359181 Helianthus annuus HOM05D000690 ORTHO05D002679 4.6e-18 96.3 301 28.6
Hma1.2p1_0263F.1_g105470 Hydrangea macrophylla HOM05D000690 ORTHO05D002679 7.8e-18 95.5 319 29.2
Lsat_1_v5_gn_5_81400 Lactuca sativa HOM05D000690 ORTHO05D002679 2.3e-17 94.0 316 27.8
Migut.J00837 Erythranthe guttata HOM05D000690 ORTHO05D002679 3.9e-17 93.2 297 31.0
ECA234G4314 Erigeron canadensis HOM05D000690 ORTHO05D002679 8.6e-17 92.0 332 27.4
Rhsim01G0110200 Rhododendron simsii HOM05D000690 ORTHO05D002679 8.6e-17 92.0 168 38.7
Sopen12g008660 Solanum pennellii HOM05D000690 ORTHO05D002679 1.5e-16 91.3 296 29.1
ATR0626G267 Amborella trichopoda HOM05D000690 ORTHO05D002679 1.9e-16 90.9 290 28.3
Solyc12g017850.2 Solanum lycopersicum HOM05D000690 ORTHO05D002679 1.9e-16 90.9 296 29.1
Nitab4.5_0005753g0020 Nicotiana tabacum HOM05D000690 ORTHO05D002679 1.4e-14 84.7 316 25.3
Cfa010120 Carpinus fangiana HOM05D000690 ORTHO05D002679 1.8e-14 84.3 130 42.3
Nitab4.5_0000219g0120 Nicotiana tabacum HOM05D000690 ORTHO05D002679 8.9e-14 82.0 319 24.8
TAR383G0827 Trochodendron aralioides HOM05D000690 ORTHO05D002679 1.2e-13 81.6 127 42.5
Sed0015173 Sechium edule HOM05D000690 ORTHO05D002679 4.4e-13 79.7 185 37.8
SalBow6G0007 Salvia bowleyana HOM05D000690 ORTHO05D002679 5.8e-13 79.3 300 26.7
Peaxi162Scf00006g03310 Petunia axillaris HOM05D000690 ORTHO05D002679 7.5e-13 79.0 314 27.1
Cc00_g00160 Coffea canephora HOM05D000690 ORTHO05D000388 9.8e-13 78.6 214 30.8
Lj5A765T48 Lonicera japonica HOM05D000690 ORTHO05D002679 9.8e-13 78.6 308 27.3
CDE02G0199 Ceratophyllum demersum HOM05D000690 ORTHO05D002679 2.2e-12 77.4 179 34.1
MBI19_g29875_MAGBIO Magnolia biondii HOM05D000690 ORTHO05D002679 2.9e-12 77.0 308 26.0
Cfa009294 Carpinus fangiana HOM05D000690 ORTHO05D002679 3.7e-12 76.6 139 39.6
HPP92_010416 Vanilla planifolia HOM05D000690 ORTHO05D000388 3.7e-12 76.6 177 37.9
Nitab4.5_0001535g0010 Nicotiana tabacum HOM05D000690 ORTHO05D002679 4.9e-12 76.3 215 29.3
HPP92_010800 Vanilla planifolia HOM05D000690 ORTHO05D000388 6.4e-12 75.9 177 32.8
CDE05G0061 Ceratophyllum demersum HOM05D000690 ORTHO05D002679 1.1e-11 75.1 219 31.1
CDE05G1367 Ceratophyllum demersum HOM05D000690 ORTHO05D002679 7.0e-11 72.4 220 31.8
Glyma.17G047500 Glycine max HOM05D000690 ORTHO05D002679 2.1e-10 70.9 299 26.1
Atru.chr7.1742 Acer truncatum HOM05D000690 ORTHO05D002679 3.5e-10 70.1 300 25.7
Aqoxy7G01008 Aquilegia oxysepala HOM05D000690 ORTHO05D002679 1.3e-09 68.2 307 25.4
arahy.Tifrunner.gnm1.ann1.GQ96QH Arachis hypogaea HOM05D000690 ORTHO05D002679 8.6e-09 65.5 174 33.9
arahy.Tifrunner.gnm1.ann1.NJE7MY Arachis hypogaea HOM05D000690 ORTHO05D002679 8.6e-09 65.5 167 34.7
MD02G1096300 Malus domestica HOM05D000690 ORTHO05D002679 1.1e-08 65.1 293 26.6
Os02g0174800 Oryza sativa ssp. japonica HOM05D000690 ORTHO05D002679 1.1e-08 65.1 311 26.4
PGR044G0133 Punica granatum HOM05D000690 ORTHO05D002679 1.1e-08 65.1 188 27.1
Lalb_Chr08g0232731 Lupinus albus HOM05D000690 ORTHO05D002679 5.6e-08 62.8 289 24.9
Glyma.09G071800 Glycine max HOM05D000690 ORTHO05D002679 7.3e-08 62.4 181 27.6
SGA_v2.0_scaffold297G47587 Striga asiatica HOM05D000690 ORTHO05D002679 7.3e-08 62.4 171 29.2
FAN19G2614 Fragaria x ananassa HOM05D000690 ORTHO05D002679 1.2e-07 61.6 172 34.3
Medtr4g124930 Medicago truncatula HOM05D000690 ORTHO05D002679 1.2e-07 61.6 298 24.5
Manes.03G042600 Manihot esculenta HOM05D000690 ORTHO05D002679 1.6e-07 61.2 301 26.2
Oeu025292.1 Olea europaea HOM05D000690 ORTHO05D002679 1.6e-07 61.2 299 24.7
CANSAT56G1930 Cannabis sativa HOM05D000690 ORTHO05D002679 2.1e-07 60.8 186 31.2
Nn8g38579 Nelumbo nucifera HOM05D000690 ORTHO05D002679 2.1e-07 60.8 339 25.1
Nn6g35673 Nelumbo nucifera HOM05D000690 ORTHO05D002679 2.8e-07 60.5 301 26.9
Phvul.009G225200 Phaseolus vulgaris HOM05D000690 ORTHO05D002679 2.8e-07 60.5 299 22.1
Prupe.7G194600 Prunus persica HOM05D000690 ORTHO05D002679 2.8e-07 60.5 296 25.3
arahy.Tifrunner.gnm1.ann1.2P95X7 Arachis hypogaea HOM05D000690 ORTHO05D002679 3.6e-07 60.1 53 52.8
arahy.Tifrunner.gnm1.ann1.DM1378 Arachis hypogaea HOM05D000690 ORTHO05D002679 3.6e-07 60.1 53 52.8
FvH4_1g09090 Fragaria vesca HOM05D000690 ORTHO05D002679 3.6e-07 60.1 165 33.3
Lj6g0020365 Lotus japonicus HOM05D000690 ORTHO05D002679 3.6e-07 60.1 292 23.3
Sp1g17100 Schrenkiella parvula HOM05D000690 ORTHO05D002679 3.6e-07 60.1 173 31.2
TWI34G1591 Tripterygium wilfordii HOM05D000690 ORTHO05D002679 3.6e-07 60.1 288 25.0
vmacro06352 Vaccinium macrocarpon HOM05D000690 ORTHO05D002679 3.6e-07 60.1 177 35.0
HPP92_017377 Vanilla planifolia HOM05D000690 ORTHO05D002679 3.6e-07 60.1 88 39.8
AL1G31780 Arabidopsis lyrata HOM05D000690 ORTHO05D002679 6.2e-07 59.3 163 30.7
CARHR019800 Cardamine hirsuta HOM05D000690 ORTHO05D002679 6.2e-07 59.3 176 30.7
FAN26G0308 Fragaria x ananassa HOM05D000690 ORTHO05D002679 6.2e-07 59.3 171 33.9
QL11p001312 Quercus lobata HOM05D000690 ORTHO05D002679 6.2e-07 59.3 306 24.8
FAN28G2744 Fragaria x ananassa HOM05D000690 ORTHO05D002679 8.1e-07 58.9 169 32.5
MD15G1220800 Malus domestica HOM05D000690 ORTHO05D002679 8.1e-07 58.9 171 32.2
Ca_09314_v3 Cicer arietinum L. HOM05D000690 ORTHO05D002679 1.1e-06 58.5 302 25.2
Ciclev10009353m.g Citrus clementina HOM05D000690 ORTHO05D002679 1.1e-06 58.5 161 32.9
Lalb_Chr11g0074111 Lupinus albus HOM05D000690 ORTHO05D002679 1.1e-06 58.5 173 31.8
GSVIVG01015039001 Vitis vinifera HOM05D000690 ORTHO05D002679 1.1e-06 58.5 311 24.8
FAN28G2832 Fragaria x ananassa HOM05D000690 ORTHO05D002679 1.8e-06 57.8 170 33.5
Psat4g018960 Pisum sativum HOM05D000690 ORTHO05D002679 1.8e-06 57.8 175 30.3
BolC2t07062H Brassica oleracea HOM05D000690 ORTHO05D002679 2.3e-06 57.4 164 30.5
PGR142G1551 Punica granatum HOM05D000690 ORTHO05D002679 2.3e-06 57.4 290 25.9
TAR468G0001 Trochodendron aralioides HOM05D000690 ORTHO05D002679 2.3e-06 57.4 312 26.0
Eucgr.C03298 Eucalyptus grandis HOM05D000690 ORTHO05D002679 3.1e-06 57.0 169 32.0
FAN23G0675 Fragaria x ananassa HOM05D000690 ORTHO05D002679 3.1e-06 57.0 170 33.5
PSO421G0334 Papaver somniferum HOM05D000690 ORTHO05D002679 3.1e-06 57.0 180 31.1
Sc08g0009030 Simmondsia chinensis HOM05D000690 ORTHO05D002679 3.1e-06 57.0 165 30.9
Migut.L01583 Erythranthe guttata HOM05D000690 ORTHO05D002679 4.0e-06 56.6 179 30.2
Thhalv10008681m.g Eutrema salsugineum HOM05D000690 ORTHO05D002679 5.2e-06 56.2 215 28.8
FAN26G2648 Fragaria x ananassa HOM05D000690 ORTHO05D002679 5.2e-06 56.2 171 33.3
Glyma.15G179800 Glycine max HOM05D000690 ORTHO05D002679 5.2e-06 56.2 190 25.8
Zm00001eb233410 Zea mays HOM05D000690 ORTHO05D002679 5.2e-06 56.2 222 26.6
MSTRG.26484 Avicennia marina HOM05D000690 ORTHO05D002679 6.8e-06 55.8 181 32.0
BcaB08g36520 Brassica carinata HOM05D000690 ORTHO05D002679 6.8e-06 55.8 163 33.1
Cpa.g.sc28.8 Carica papaya HOM05D000690 ORTHO05D002679 6.8e-06 55.8 287 25.8
Oeu060634.2 Olea europaea HOM05D000690 ORTHO05D002679 6.8e-06 55.8 284 24.3
BNapus_Darmor_BZH_scaffold_38p01380 Brassica napus HOM05D000690 ORTHO05D002679 8.9e-06 55.5 162 30.2
BraA02t05589Z Brassica rapa HOM05D000690 ORTHO05D002679 8.9e-06 55.5 162 30.2


User provided reference genes

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