Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0117100 Salix brachista HOM05D006970 ORTHO05D008332 7.8e-89 330.5 173 100.0
Potri.018G143700 Populus trichocarpa HOM05D006970 ORTHO05D008332 1.4e-77 293.1 173 89.6
Potri.006G076500 Populus trichocarpa HOM05D006970 ORTHO05D008332 4.8e-62 241.5 175 75.4
Sabra06G0057400 Salix brachista HOM05D006970 ORTHO05D008332 1.1e-61 240.4 174 75.3
Glyma.15G164800 Glycine max HOM05D006970 ORTHO05D008332 4.1e-37 158.7 182 51.6
QL02p047741 Quercus lobata HOM05D006970 ORTHO05D008332 6.9e-37 157.9 171 52.6
Glyma.09G058700 Glycine max HOM05D006970 ORTHO05D008332 2.5e-34 149.4 184 49.5
CiPaw.07G196100 Carya illinoinensis HOM05D006970 ORTHO05D008332 9.4e-34 147.5 191 47.6
VMungo1309G0689 Vigna mungo HOM05D006970 ORTHO05D008332 2.1e-33 146.4 174 48.9
Manes.06G020600 Manihot esculenta HOM05D006970 ORTHO05D008332 6.1e-33 144.8 184 46.7
Prupe.1G076900 Prunus persica HOM05D006970 ORTHO05D008332 7.9e-33 144.4 205 43.9
Cfa013439 Carpinus fangiana HOM05D006970 ORTHO05D008332 1.4e-32 143.7 175 49.1
Phvul.003G142300 Phaseolus vulgaris HOM05D006970 ORTHO05D008332 1.8e-32 143.3 175 48.0
Phvul.009G237000 Phaseolus vulgaris HOM05D006970 ORTHO05D008332 1.8e-32 143.3 170 50.0
Atru.chr7.798 Acer truncatum HOM05D006970 ORTHO05D008332 5.1e-32 141.7 166 51.8
Haze_22006 Corylus avellana HOM05D006970 ORTHO05D008332 5.1e-32 141.7 171 49.1
Medtr2g037760 Medicago truncatula HOM05D006970 ORTHO05D008332 6.7e-32 141.4 182 45.6
Cfa013442 Carpinus fangiana HOM05D006970 ORTHO05D008332 1.1e-31 140.6 180 46.7
Lj6g0012098 Lotus japonicus HOM05D006970 ORTHO05D008332 2.6e-31 139.4 186 46.8
MD16G1250000 Malus domestica HOM05D006970 ORTHO05D008332 7.4e-31 137.9 208 42.3
Psat1g144640 Pisum sativum HOM05D006970 ORTHO05D008332 7.4e-31 137.9 184 46.2
Lalb_Chr12g0199561 Lupinus albus HOM05D006970 ORTHO05D008332 9.7e-31 137.5 164 47.0
Ca_02084_v3 Cicer arietinum L. HOM05D006970 ORTHO05D008332 2.8e-30 136.0 184 45.7
Ca_02089_v3 Cicer arietinum L. HOM05D006970 ORTHO05D008332 2.8e-30 136.0 184 45.7
RcHm_v2.0_Chr4g0399841 Rosa chinensis HOM05D006970 ORTHO05D008332 4.8e-30 135.2 207 44.9
Haze_22007 Corylus avellana HOM05D006970 ORTHO05D008332 1.1e-29 134.0 178 46.1
MD13G1243500 Malus domestica HOM05D006970 ORTHO05D008332 1.8e-29 133.3 199 41.2
arahy.Tifrunner.gnm1.ann1.7NZ92R Arachis hypogaea HOM05D006970 ORTHO05D008332 2.4e-29 132.9 202 41.6
Glyma.17G060200 Glycine max HOM05D006970 ORTHO05D008332 2.4e-29 132.9 171 45.6
Duzib168G1017 Durio zibethinus HOM05D006970 ORTHO05D008332 4.1e-29 132.1 167 50.9
Cfa013440 Carpinus fangiana HOM05D006970 ORTHO05D008332 5.3e-29 131.7 181 45.3
Cfa013441 Carpinus fangiana HOM05D006970 ORTHO05D008332 7.0e-29 131.3 178 45.5
TAR383G0018 Trochodendron aralioides HOM05D006970 ORTHO05D008332 9.1e-29 131.0 193 43.5
Medtr4g127530 Medicago truncatula HOM05D006970 ORTHO05D008332 2.0e-28 129.8 186 43.0
Thecc.09G184400 Theobroma cacao HOM05D006970 ORTHO05D008332 2.6e-28 129.4 190 42.1
Cc06_g21770 Coffea canephora HOM05D006970 ORTHO05D008332 3.5e-28 129.0 189 43.9
COL.COLO4_34251 Corchorus olitorius HOM05D006970 ORTHO05D008332 3.5e-28 129.0 181 45.3
Glyma.13G099800 Glycine max HOM05D006970 ORTHO05D008332 3.5e-28 129.0 171 44.4
Thecc.09G184300 Theobroma cacao HOM05D006970 ORTHO05D008332 3.5e-28 129.0 180 47.8
Cpa.g.sc95.19 Carica papaya HOM05D006842 ORTHO05D008908 1.7e-27 126.7 176 48.3
Nitab4.5_0000007g0270 Nicotiana tabacum HOM05D006970 ORTHO05D008332 1.7e-27 126.7 157 48.4
TPR.G5397 Trifolium pratense HOM05D006970 ORTHO05D008332 1.7e-27 126.7 185 43.8
Lalb_Chr11g0074841 Lupinus albus HOM05D006970 ORTHO05D008332 3.8e-27 125.6 182 41.8
TAR626G0909 Trochodendron aralioides HOM05D006970 ORTHO05D008332 3.8e-27 125.6 198 41.9
Gohir.A13G209000 Gossypium hirsutum HOM05D006970 ORTHO05D008332 6.5e-27 124.8 176 44.3
Gohir.D13G213400 Gossypium hirsutum HOM05D006970 ORTHO05D008332 1.5e-26 123.6 176 43.8
Lalb_Chr08g0231751 Lupinus albus HOM05D006970 ORTHO05D008332 1.5e-26 123.6 183 42.6
Lalb_Chr08g0231861 Lupinus albus HOM05D006970 ORTHO05D008332 1.5e-26 123.6 183 42.6
Gohir.D05G003200 Gossypium hirsutum HOM05D006970 ORTHO05D008332 1.9e-26 123.2 170 47.6
Gorai.009G002800 Gossypium raimondii HOM05D006970 ORTHO05D008332 1.9e-26 123.2 170 47.6
Gorai.013G243700 Gossypium raimondii HOM05D006970 ORTHO05D008332 1.9e-26 123.2 176 43.8
Nitab4.5_0001335g0030 Nicotiana tabacum HOM05D006970 ORTHO05D008332 1.9e-26 123.2 157 49.0
CiPaw.08G033400 Carya illinoinensis HOM05D006970 ORTHO05D008332 2.5e-26 122.9 182 45.1
PGR142G3285 Punica granatum HOM05D006970 ORTHO05D008332 2.5e-26 122.9 191 41.4
Duzib168G1189 Durio zibethinus HOM05D006970 ORTHO05D008332 3.2e-26 122.5 173 44.5
FAN22G0526 Fragaria x ananassa HOM05D006970 ORTHO05D008332 3.2e-26 122.5 204 41.2
Rhsim01G0118800 Rhododendron simsii HOM05D006970 ORTHO05D008332 3.2e-26 122.5 189 40.7
FAN07G0294 Fragaria x ananassa HOM05D006970 ORTHO05D008332 5.5e-26 121.7 204 41.2
Migut.O00829 Erythranthe guttata HOM05D006970 ORTHO05D008332 7.2e-26 121.3 177 45.8
FAN12G3539 Fragaria x ananassa HOM05D006970 ORTHO05D008332 9.4e-26 120.9 204 40.7
Migut.L01891 Erythranthe guttata HOM05D006970 ORTHO05D008332 1.6e-25 120.2 176 45.5
FvH4_4g07400 Fragaria vesca HOM05D006970 ORTHO05D008332 1.6e-25 120.2 204 40.7
Haze_22008 Corylus avellana HOM05D006970 ORTHO05D008332 2.1e-25 119.8 181 41.4
Lj4g0006636 Lotus japonicus HOM05D006970 ORTHO05D008332 2.1e-25 119.8 171 45.6
Ciclev10009783m.g Citrus clementina HOM05D006970 ORTHO05D008332 3.6e-25 119.0 150 50.0
TAR625G0812 Trochodendron aralioides HOM05D006970 ORTHO05D008332 3.6e-25 119.0 176 41.5
FAN17G1729 Fragaria x ananassa HOM05D006970 ORTHO05D008332 4.7e-25 118.6 208 39.4
Oeu015404.1 Olea europaea HOM05D006970 ORTHO05D008332 6.1e-25 118.2 188 41.0
COL.COLO4_34244 Corchorus olitorius HOM05D006970 ORTHO05D008332 1.4e-24 117.1 166 44.6
Peaxi162Scf00324g10017 Petunia axillaris HOM05D006970 ORTHO05D008332 1.8e-24 116.7 183 41.0
Peaxi162Scf00324g00005 Petunia axillaris HOM05D006970 ORTHO05D008332 3.0e-24 115.9 183 40.4
Dinv41166 Davidia involucrata HOM05D006970 ORTHO05D008332 4.0e-24 115.5 135 50.4
Gohir.A05G002800 Gossypium hirsutum HOM05D006970 ORTHO05D008332 1.1e-23 114.0 146 50.0
Eucgr.C00123 Eucalyptus grandis HOM05D006970 ORTHO05D008332 1.5e-23 113.6 204 38.2
Eucgr.C02224 Eucalyptus grandis HOM05D006970 ORTHO05D008332 3.3e-23 112.5 210 40.5
Nn8g40876 Nelumbo nucifera HOM05D006970 ORTHO05D008332 3.3e-23 112.5 197 40.1
vmacro20825 Vaccinium macrocarpon HOM05D006970 ORTHO05D008332 5.7e-23 111.7 185 39.5
Ciclev10009598m.g Citrus clementina HOM05D006970 ORTHO05D008332 7.5e-23 111.3 183 43.7
Solyc07g008930.1 Solanum lycopersicum HOM05D006970 ORTHO05D008332 3.7e-22 109.0 193 38.9
PGSC0003DMG400028751 Solanum tuberosum HOM05D006970 ORTHO05D008332 1.4e-21 107.1 190 37.9
PGSC0003DMG400028750 Solanum tuberosum HOM05D006970 ORTHO05D008332 9.1e-21 104.4 189 39.7
Ciclev10010480m.g Citrus clementina HOM05D006970 ORTHO05D008332 1.6e-20 103.6 171 41.5
DCAR_019800 Daucus carota HOM05D006970 ORTHO05D008332 1.3e-19 100.5 99 53.5
Aqoxy7G02762 Aquilegia oxysepala HOM05D006970 ORTHO05D008332 2.2e-19 99.8 163 40.5
HPP92_017386 Vanilla planifolia HOM05D006970 ORTHO05D008332 2.9e-19 99.4 158 42.4
MELO3C003983.2 Cucumis melo HOM05D006970 ORTHO05D008332 5.0e-19 98.6 161 37.3
Sed0005019 Sechium edule HOM05D006970 ORTHO05D008332 8.5e-19 97.8 164 40.2
SalBow5G5711 Salvia bowleyana HOM05D006970 ORTHO05D008332 1.9e-18 96.7 144 38.9
Sed0023812 Sechium edule HOM05D006970 ORTHO05D008332 1.6e-17 93.6 167 35.9
HPP92_017039 Vanilla planifolia HOM05D006970 ORTHO05D008332 3.6e-17 92.4 150 39.3
ClCG11G011830 Citrullus lanatus HOM05D006970 ORTHO05D008332 4.7e-17 92.0 163 37.4
Ciclev10009750m.g Citrus clementina HOM05D006970 ORTHO05D008332 8.0e-17 91.3 145 43.4
CDE04G3128 Ceratophyllum demersum HOM05D006970 ORTHO05D008332 1.8e-16 90.1 174 33.9
MBI13_g31534_MAGBIO Magnolia biondii HOM05D006970 ORTHO05D008332 2.3e-16 89.7 167 34.7
CsaV3_2G008660 Cucumis sativus L. HOM05D006970 ORTHO05D008332 8.8e-16 87.8 144 40.3
Lsat_1_v5_gn_8_69441 Lactuca sativa HOM05D006970 ORTHO05D008332 2.0e-15 86.7 170 35.3
CDE02G0129 Ceratophyllum demersum HOM05D006970 ORTHO05D008332 3.4e-15 85.9 178 33.7
Ciclev10027216m.g Citrus clementina HOM05D006970 ORTHO05D008332 7.5e-15 84.7 135 42.2
SGA_v2.0_scaffold46G17371 Striga asiatica HOM05D006970 ORTHO05D008332 2.2e-14 83.2 198 32.8
DCAR_019820 Daucus carota HOM05D000178 ORTHO05D001582 8.3e-14 81.3 192 32.3
ECA236G3316 Erigeron canadensis HOM05D006970 ORTHO05D008332 1.8e-13 80.1 169 34.3
HPP92_017115 Vanilla planifolia HOM05D006970 ORTHO05D008332 2.4e-13 79.7 164 33.5
ATR0626G126 Amborella trichopoda HOM05D006970 ORTHO05D008332 5.4e-13 78.6 180 34.4
TPR.G30780 Trifolium pratense HOM05D006970 ORTHO05D008332 7.0e-13 78.2 123 41.5
Os06g0700300 Oryza sativa ssp. japonica HOM05D006970 ORTHO05D008332 1.2e-12 77.4 120 40.8
HanXRQChr05g0140891 Helianthus annuus HOM05D006970 ORTHO05D008332 2.2e-11 73.2 167 35.9
ECA240G2451 Erigeron canadensis HOM05D006970 ORTHO05D008332 3.6e-09 65.9 93 39.8
Nitab4.5_0000366g0130 Nicotiana tabacum HOM05D006970 ORTHO05D008332 1.5e-07 60.5 130 35.4
Sopen07g004850 Solanum pennellii HOM05D006970 ORTHO05D008332 5.7e-07 58.5 128 33.6
HPP92_021988 Vanilla planifolia HOM05D006970 ORTHO05D008332 7.5e-07 58.2 144 31.9
Zm00001eb226840 Zea mays HOM05D006970 ORTHO05D008332 6.3e-06 55.1 131 33.6


User provided reference genes

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