Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 1.6e-310 1068.5 547 100.0
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 2.6e-279 964.9 549 91.1
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 1.3e-251 872.8 547 82.8
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 2.3e-219 765.8 553 73.1
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 5.3e-208 728.0 551 71.5
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 1.1e-205 720.3 550 70.9
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 1.9e-205 719.5 550 70.2
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 3.6e-204 715.3 573 66.7
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 2.2e-201 706.1 561 68.6
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 2.2e-201 706.1 545 69.5
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 3.1e-200 702.2 549 68.9
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 2.9e-198 695.7 566 67.1
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 2.1e-196 689.5 512 71.5
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 7.5e-194 681.0 554 68.2
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 1.3e-193 680.2 553 68.2
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 4.8e-193 678.3 532 67.1
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 4.5e-191 671.8 515 69.9
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 7.7e-191 671.0 543 68.1
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 8.5e-190 667.5 524 69.1
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 1.5e-189 666.8 515 69.5
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 1.3e-185 653.7 554 64.8
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 8.3e-185 651.0 558 64.7
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.1e-184 650.6 561 64.7
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 7.0e-184 647.9 557 63.7
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 7.0e-184 647.9 555 64.5
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 1.7e-182 643.3 572 62.6
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.9e-181 639.8 560 64.1
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 1.6e-180 636.7 549 63.6
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 2.3e-179 632.9 523 65.4
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 4.0e-179 632.1 522 65.1
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 8.8e-179 630.9 554 63.0
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 4.1e-176 622.1 510 65.1
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 9.2e-176 620.9 559 61.5
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 9.2e-176 620.9 562 61.9
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 1.2e-170 604.0 522 63.0
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 4.4e-170 602.1 501 65.3
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 4.9e-169 598.6 533 62.7
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 1.4e-168 597.0 560 58.8
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 2.4e-168 596.3 530 62.3
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 1.0e-166 590.9 548 60.0
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 6.6e-166 588.2 534 61.6
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 3.3e-165 585.9 531 61.0
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 4.7e-164 582.0 552 60.0
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 4.0e-163 578.9 535 61.3
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 2.0e-162 576.6 525 62.5
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 4.4e-162 575.5 531 61.2
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 7.5e-162 574.7 568 57.9
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 9.8e-162 574.3 552 59.1
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 9.8e-162 574.3 539 60.5
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 1.7e-161 573.5 637 55.1
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 8.3e-161 571.2 523 60.2
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 2.4e-160 569.7 510 62.0
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 2.4e-160 569.7 511 62.0
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 2.7e-159 566.2 546 58.8
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 8.6e-158 561.2 595 57.1
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 8.6e-158 561.2 595 57.1
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 8.6e-158 561.2 521 60.5
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 4.3e-157 558.9 556 59.4
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 5.6e-157 558.5 526 59.5
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 2.3e-155 553.1 528 58.7
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 8.9e-155 551.2 531 57.8
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 4.4e-154 548.9 550 57.6
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 4.3e-149 532.3 531 57.3
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 1.6e-148 530.4 501 57.5
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 1.5e-146 523.9 515 58.1
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 2.6e-146 523.1 531 57.3
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 9.2e-144 514.6 502 58.2
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 3.9e-142 509.2 544 55.7
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 3.9e-142 509.2 492 58.3
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 1.8e-139 500.4 533 54.6
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.8e-139 500.4 560 52.5
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 8.4e-137 491.5 545 53.4
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 1.2e-135 487.6 510 54.3
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 1.2e-135 487.6 440 60.2
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 2.1e-132 476.9 504 55.2
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 3.6e-132 476.1 535 54.2
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 1.4e-131 474.2 509 53.2
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 8.4e-129 464.9 502 53.2
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 1.0e-126 458.0 468 55.1
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 5.6e-125 452.2 424 60.6
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 9.0e-123 444.9 507 51.7
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 4.9e-121 439.1 549 49.4
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 1.1e-120 438.0 406 61.8
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 5.5e-120 435.6 464 56.7
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 4.6e-119 432.6 502 50.0
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 7.4e-117 425.2 492 51.0
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 8.4e-113 411.8 504 48.2
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 2.3e-110 403.7 503 51.3
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 3.9e-110 402.9 350 62.6
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 3.0e-102 376.7 505 48.7
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 1.1e-101 374.8 510 47.1
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 2.4e-99 367.1 533 46.3
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 7.2e-96 355.5 537 46.0
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 9.4e-96 355.1 526 46.6
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 2.8e-92 343.6 553 41.8
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 4.5e-90 336.3 516 42.2
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 2.9e-89 333.6 585 39.3
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 8.5e-89 332.0 545 40.9
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 2.7e-87 327.0 337 56.1
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 3.0e-86 323.6 302 58.3
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 2.5e-80 303.9 553 39.4
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 1.4e-78 298.1 531 38.2
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.7e-76 291.2 295 55.3
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 2.0e-74 284.3 550 34.5
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 8.0e-71 272.3 228 62.3
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 7.2e-64 249.2 222 61.3
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 4.9e-60 236.5 373 44.0
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 3.5e-58 230.3 536 32.6
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 1.9e-43 181.4 663 28.2
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 1.3e-41 175.3 384 35.9
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 9.5e-40 169.1 584 30.1
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 4.4e-37 160.2 141 61.7
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 4.7e-31 140.2 89 76.4
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 2.7e-26 124.4 129 58.1
Peaxi162Scf00370g00114 Petunia axillaris HOM05D006568 ORTHO05D008342 4.5e-13 80.5 114 45.6
Oeu060513.1 Olea europaea HOM05D006568 ORTHO05D008342 7.1e-11 73.2 98 40.8
SMO172G0023 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 8.7e-09 66.2 53 58.5
Medtr8g014610 Medicago truncatula HOM05D006568 ORTHO05D258972 2.8e-07 61.2 77 45.5


User provided reference genes

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