Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 3.3e-75 285.0 150 100.0
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 3.4e-64 248.4 151 89.4
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 2.1e-50 202.6 152 77.6
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 1.7e-44 183.0 148 68.9
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 6.6e-44 181.0 152 69.7
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 1.1e-43 180.3 150 69.3
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 4.3e-43 178.3 148 71.6
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 4.8e-42 174.9 158 67.1
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 6.2e-42 174.5 151 68.9
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 8.1e-42 174.1 148 67.6
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 5.3e-41 171.4 153 68.0
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 5.3e-41 171.4 150 68.0
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 5.3e-41 171.4 150 66.7
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 9.0e-41 170.6 152 67.8
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 9.0e-41 170.6 152 67.8
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 5.8e-40 167.9 151 67.5
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 7.6e-40 167.5 151 66.9
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 7.6e-40 167.5 150 67.3
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 7.6e-40 167.5 150 67.3
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 7.6e-40 167.5 151 66.9
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 7.6e-40 167.5 149 67.1
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.3e-39 166.8 148 66.2
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.3e-39 166.8 148 66.2
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 1.7e-39 166.4 150 66.0
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 2.2e-39 166.0 148 66.2
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 2.9e-39 165.6 143 67.8
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 2.9e-39 165.6 153 63.4
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 2.9e-39 165.6 148 65.5
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 3.8e-39 165.2 150 65.3
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 4.9e-39 164.9 152 67.8
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 8.4e-39 164.1 155 67.1
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 1.9e-38 162.9 150 63.3
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 2.4e-38 162.5 157 64.3
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 3.2e-38 162.2 148 64.9
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 3.2e-38 162.2 149 65.8
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 3.2e-38 162.2 138 65.9
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 4.2e-38 161.8 152 65.8
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 4.2e-38 161.8 152 65.8
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 4.2e-38 161.8 148 64.9
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 4.2e-38 161.8 150 65.3
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 4.2e-38 161.8 151 64.9
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 5.4e-38 161.4 155 66.5
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 7.1e-38 161.0 152 67.8
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 7.1e-38 161.0 149 64.4
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 1.2e-37 160.2 148 66.9
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 2.1e-37 159.5 150 62.0
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 2.7e-37 159.1 148 64.2
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 2.7e-37 159.1 151 63.6
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 3.5e-37 158.7 130 70.0
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 3.5e-37 158.7 150 64.7
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 1.0e-36 157.1 144 66.7
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 1.0e-36 157.1 151 64.9
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 2.3e-36 156.0 153 64.1
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 2.3e-36 156.0 150 62.7
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 3.0e-36 155.6 129 69.0
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 3.9e-36 155.2 129 69.0
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 6.7e-36 154.5 152 64.5
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 8.7e-36 154.1 144 63.9
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 1.5e-35 153.3 112 75.9
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 1.9e-35 152.9 131 69.5
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 1.9e-35 152.9 154 61.7
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 4.3e-35 151.8 132 69.7
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 4.3e-35 151.8 130 70.8
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 2.1e-34 149.4 153 62.7
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 2.1e-34 149.4 129 67.4
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 2.8e-34 149.1 112 74.1
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 1.1e-33 147.1 149 57.0
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 1.4e-33 146.7 128 67.2
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 5.3e-33 144.8 127 66.9
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 2.6e-32 142.5 118 72.9
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 2.6e-32 142.5 150 60.0
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 2.6e-32 142.5 150 59.3
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 5.8e-32 141.4 154 61.7
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 1.7e-31 139.8 145 60.7
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 3.8e-31 138.7 126 64.3
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 6.4e-31 137.9 119 68.1
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 1.4e-30 136.7 114 71.9
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 2.4e-30 136.0 131 63.4
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 1.2e-29 133.7 136 59.6
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 1.2e-29 133.7 108 70.4
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 1.2e-29 133.7 106 72.6
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 1.2e-29 133.7 83 85.5
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 1.6e-29 133.3 145 56.6
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 2.1e-29 132.9 147 55.1
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 3.5e-29 132.1 120 65.8
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 1.3e-28 130.2 123 63.4
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 6.7e-28 127.9 78 85.9
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 1.1e-27 127.1 154 59.7
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 1.1e-27 127.1 143 57.3
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 1.5e-27 126.7 149 56.4
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 1.9e-27 126.3 148 54.7
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 1.9e-27 126.3 111 65.8
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 4.3e-27 125.2 110 66.4
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 4.3e-27 125.2 105 73.3
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 5.6e-27 124.8 148 54.7
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 7.4e-27 124.4 130 58.5
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 9.6e-27 124.0 121 60.3
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 1.3e-26 123.6 155 56.1
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 1.3e-26 123.6 125 61.6
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 1.6e-26 123.2 67 92.5
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 2.1e-26 122.9 148 53.4
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 4.8e-26 121.7 99 68.7
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 4.8e-26 121.7 121 59.5
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 4.8e-26 121.7 66 92.4
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 6.2e-26 121.3 121 59.5
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 8.2e-26 120.9 144 53.5
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 4.0e-25 118.6 126 56.3
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 1.0e-23 114.0 143 49.7
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 5.5e-22 108.2 220 40.5
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 1.2e-21 107.1 114 60.5
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 3.9e-20 102.1 88 69.3
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 1.6e-18 96.7 67 76.1
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 2.8e-18 95.9 73 71.2
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 6.3e-18 94.7 77 64.9
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 6.3e-18 94.7 100 55.0
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 1.5e-16 90.1 103 57.3
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 1.3e-15 87.0 113 49.6
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 1.7e-15 86.7 97 56.7
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 4.3e-11 72.0 176 36.9
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 4.8e-10 68.6 84 53.6
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 1.4e-09 67.0 114 46.5
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 4.5e-08 62.0 73 57.5
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 5.9e-08 61.6 61 50.8
MCO09G536 Micromonas commoda HOM05D006256 ORTHO05D007833 2.9e-07 59.3 64 48.4
Zm00001eb000270 Zea mays HOM05D006256 ORTHO05D007833 2.9e-07 59.3 48 75.0


User provided reference genes

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