Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0085600 Salix brachista HOM05D004507 ORTHO05D004874 1.5e-104 382.9 201 100.0
Potri.018G099100 Populus trichocarpa HOM05D004507 ORTHO05D004874 2.7e-85 318.9 187 90.9
Potri.006G177000 Populus trichocarpa HOM05D004507 ORTHO05D004874 2.7e-77 292.4 188 84.6
Sabra06G0135200 Salix brachista HOM05D004507 ORTHO05D004874 2.9e-71 272.3 190 80.0
Duzib187G0534 Durio zibethinus HOM05D004507 ORTHO05D004874 4.1e-57 225.3 184 64.7
Duzib150G1659 Durio zibethinus HOM05D004507 ORTHO05D004874 1.1e-54 217.2 187 66.8
QL02p095594 Quercus lobata HOM05D004507 ORTHO05D004874 1.5e-54 216.9 190 64.2
Thecc.09G160500 Theobroma cacao HOM05D004507 ORTHO05D004874 2.5e-54 216.1 187 63.6
TAR636G1916 Trochodendron aralioides HOM05D004507 ORTHO05D004874 4.3e-54 215.3 184 61.4
Atru.chr7.491 Acer truncatum HOM05D004507 ORTHO05D004874 5.6e-54 214.9 186 63.4
CiPaw.07G186500 Carya illinoinensis HOM05D004507 ORTHO05D004874 2.1e-53 213.0 190 61.1
Duzib168G0769 Durio zibethinus HOM05D004507 ORTHO05D004874 1.0e-52 210.7 188 62.2
TAR383G0901 Trochodendron aralioides HOM05D004507 ORTHO05D004874 1.8e-52 209.9 187 62.6
TAR625G0362 Trochodendron aralioides HOM05D004507 ORTHO05D004874 2.3e-52 209.5 184 60.9
Manes.14G147700 Manihot esculenta HOM05D004507 ORTHO05D004874 2.0e-51 206.5 190 64.7
Dinv42787 Davidia involucrata HOM05D004507 ORTHO05D004874 9.8e-51 204.1 191 60.7
Dinv43314 Davidia involucrata HOM05D004507 ORTHO05D004874 9.8e-51 204.1 191 60.7
Hma1.2p1_0156F.1_g068730 Hydrangea macrophylla HOM05D004507 ORTHO05D004874 1.3e-50 203.8 185 58.4
Ciclev10009640m.g Citrus clementina HOM05D004507 ORTHO05D004874 2.2e-50 203.0 186 60.8
Cfa013550 Carpinus fangiana HOM05D004507 ORTHO05D004874 3.7e-50 202.2 184 61.4
Dinv41307 Davidia involucrata HOM05D004507 ORTHO05D004874 3.7e-50 202.2 186 60.8
TAR626G0275 Trochodendron aralioides HOM05D004507 ORTHO05D004874 1.4e-49 200.3 187 56.1
Haze_22171 Corylus avellana HOM05D004507 ORTHO05D004874 4.1e-49 198.7 186 60.2
Nn8g40236 Nelumbo nucifera HOM05D004507 ORTHO05D004874 9.2e-49 197.6 189 59.8
Nn2g12545 Nelumbo nucifera HOM05D004507 ORTHO05D004874 4.6e-48 195.3 174 63.8
Nitab4.5_0001427g0130 Nicotiana tabacum HOM05D004507 ORTHO05D004874 6.0e-48 194.9 209 49.8
Eucgr.C00212 Eucalyptus grandis HOM05D004507 ORTHO05D004874 7.8e-48 194.5 193 54.9
Peaxi162Scf00525g00089 Petunia axillaris HOM05D004507 ORTHO05D004874 2.3e-47 193.0 187 57.2
CiPaw.08G040400 Carya illinoinensis HOM05D004507 ORTHO05D004874 4.3e-46 188.7 179 54.2
Gohir.D08G097200 Gossypium hirsutum HOM05D004507 ORTHO05D004874 5.6e-46 188.3 187 57.2
Aqoxy7G03243 Aquilegia oxysepala HOM05D004507 ORTHO05D004874 1.6e-45 186.8 186 56.5
Rhsim01G0012400 Rhododendron simsii HOM05D004507 ORTHO05D004874 1.6e-45 186.8 177 58.8
Gorai.004G104000 Gossypium raimondii HOM05D004507 ORTHO05D004874 2.8e-45 186.0 188 55.9
Nitab4.5_0002587g0090 Nicotiana tabacum HOM05D004507 ORTHO05D004874 2.8e-45 186.0 185 56.8
Cpa.g.sc75.20 Carica papaya HOM05D004507 ORTHO05D004874 3.1e-44 182.6 193 56.0
PGSC0003DMG400011171 Solanum tuberosum HOM05D004507 ORTHO05D004874 1.5e-43 180.3 183 54.6
Prupe.1G097600 Prunus persica HOM05D004507 ORTHO05D004874 4.4e-43 178.7 194 56.7
Sopen07g002400 Solanum pennellii HOM05D004507 ORTHO05D004874 1.3e-42 177.2 185 55.1
COL.COLO4_24287 Corchorus olitorius HOM05D004507 ORTHO05D004874 1.1e-41 174.1 192 58.3
Oeu045661.2 Olea europaea HOM05D004507 ORTHO05D004874 9.2e-41 171.0 180 56.1
VMungo1215G3417 Vigna mungo HOM05D004507 ORTHO05D004874 2.7e-40 169.5 183 52.5
Nitab4.5_0007380g0020 Nicotiana tabacum HOM05D004507 ORTHO05D004874 2.3e-39 166.4 188 52.1
TWI34G1692 Tripterygium wilfordii HOM05D004507 ORTHO05D004874 3.0e-39 166.0 188 50.5
ClCG06G012890 Citrullus lanatus HOM05D004507 ORTHO05D004874 6.6e-39 164.9 180 53.3
Glyma.13G091500 Glycine max HOM05D004507 ORTHO05D004874 8.6e-39 164.5 189 51.3
Glyma.17G068800 Glycine max HOM05D004507 ORTHO05D004874 1.1e-38 164.1 183 49.7
Lalb_Chr13g0300541 Lupinus albus HOM05D004507 ORTHO05D004874 1.9e-38 163.3 192 50.5
Phvul.003G151300 Phaseolus vulgaris HOM05D004507 ORTHO05D004874 1.9e-38 163.3 184 52.2
Lsat_1_v5_gn_8_64381 Lactuca sativa HOM05D004507 ORTHO05D004874 7.3e-38 161.4 191 47.1
ECA240G1410 Erigeron canadensis HOM05D004507 ORTHO05D004874 1.6e-37 160.2 185 50.3
Lsat_1_v5_gn_5_87560 Lactuca sativa HOM05D004507 ORTHO05D004874 1.6e-37 160.2 191 49.2
Lj4g0026981 Lotus japonicus HOM05D004507 ORTHO05D004874 3.6e-37 159.1 189 50.8
Lsat_1_v5_gn_7_51920 Lactuca sativa HOM05D004507 ORTHO05D004874 4.7e-37 158.7 188 48.4
EL10Ac8g18870 Beta vulgaris HOM05D004507 ORTHO05D004874 1.4e-36 157.1 197 45.7
Lalb_Chr12g0199041 Lupinus albus HOM05D004507 ORTHO05D004874 2.3e-36 156.4 187 48.1
MBI14_g08083_MAGBIO Magnolia biondii HOM05D004507 ORTHO05D004874 2.3e-36 156.4 159 56.0
PGR142G2563 Punica granatum HOM05D004507 ORTHO05D004874 4.0e-36 155.6 185 50.3
TWI32G0773 Tripterygium wilfordii HOM05D004507 ORTHO05D004874 8.9e-36 154.5 191 47.6
MELO3C010170.2 Cucumis melo HOM05D004507 ORTHO05D004874 1.2e-35 154.1 180 50.6
Sed0006958 Sechium edule HOM05D004507 ORTHO05D004874 1.2e-35 154.1 184 49.5
Sed0016542 Sechium edule HOM05D004507 ORTHO05D004874 2.6e-35 152.9 185 46.5
TPR.G5348 Trifolium pratense HOM05D004507 ORTHO05D004874 2.6e-35 152.9 183 48.1
DCAR_017942 Daucus carota HOM05D004507 ORTHO05D004874 3.4e-35 152.5 194 47.9
Psat0s1742g0040 Pisum sativum HOM05D004507 ORTHO05D004874 2.9e-34 149.4 184 47.8
THA.LOC104803518 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 3.7e-34 149.1 185 50.3
Ca_21181_v3 Cicer arietinum L. HOM05D004507 ORTHO05D004874 4.9e-34 148.7 182 47.3
MBI15_g25682_MAGBIO Magnolia biondii HOM05D004507 ORTHO05D004874 6.4e-34 148.3 184 48.4
PSO782G3560 Papaver somniferum HOM05D004507 ORTHO05D004874 1.1e-33 147.5 185 50.3
CsaV3_1G029460 Cucumis sativus L. HOM05D004507 ORTHO05D004874 1.4e-33 147.1 180 48.9
Gorai.004G273100 Gossypium raimondii HOM05D004507 ORTHO05D004874 1.9e-33 146.7 178 47.8
HanXRQChr10g0306471 Helianthus annuus HOM05D004507 ORTHO05D004874 1.9e-33 146.7 184 45.7
Migut.K00276 Erythranthe guttata HOM05D004507 ORTHO05D004874 2.4e-33 146.4 179 46.9
Gohir.D08G255900 Gossypium hirsutum HOM05D004507 ORTHO05D004874 3.2e-33 146.0 178 47.8
CSS0033256 Camellia sinensis var. sinensis HOM05D004507 ORTHO05D004874 7.1e-33 144.8 146 52.1
Gohir.A08G235500 Gossypium hirsutum HOM05D004507 ORTHO05D004874 9.2e-33 144.4 178 47.8
arahy.Tifrunner.gnm1.ann1.RZ4SGF Arachis hypogaea HOM05D004507 ORTHO05D004874 1.2e-32 144.1 186 47.3
HanXRQChr09g0245171 Helianthus annuus HOM05D004507 ORTHO05D004874 1.6e-32 143.7 158 52.5
MSTRG.10721 Avicennia marina HOM05D004507 ORTHO05D004874 2.1e-32 143.3 180 48.9
HanXRQChr03g0066301 Helianthus annuus HOM05D004507 ORTHO05D004874 3.5e-32 142.5 158 53.8
ECA234G3792 Erigeron canadensis HOM05D004507 ORTHO05D004874 1.3e-31 140.6 184 48.4
arahy.Tifrunner.gnm1.ann1.40EERC Arachis hypogaea HOM05D004507 ORTHO05D004874 1.7e-31 140.2 184 46.7
Oeu031854.1 Olea europaea HOM05D004507 ORTHO05D004874 3.9e-31 139.0 154 53.2
MSTRG.6179 Avicennia marina HOM05D004507 ORTHO05D004874 6.6e-31 138.3 183 47.5
Medtr4g129560 Medicago truncatula HOM05D004507 ORTHO05D004874 6.6e-31 138.3 183 47.5
Sp7g28290 Schrenkiella parvula HOM05D004507 ORTHO05D004874 6.6e-31 138.3 183 49.2
SGA_v2.0_scaffold69G23313 Striga asiatica HOM05D004507 ORTHO05D004874 1.5e-30 137.1 188 47.9
THA.LOC104819987 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 4.3e-30 135.6 186 46.2
BcaNung02991 Brassica carinata HOM05D004507 ORTHO05D004874 1.6e-29 133.7 183 47.0
BcaC01g01152 Brassica carinata HOM05D004507 ORTHO05D004874 3.6e-29 132.5 184 47.3
C03p88720 Brassica napus HOM05D004507 ORTHO05D004874 3.6e-29 132.5 184 47.3
A08p19250 Brassica napus HOM05D004507 ORTHO05D004874 4.7e-29 132.1 183 47.0
BraA08t33886Z Brassica rapa HOM05D004507 ORTHO05D004874 4.7e-29 132.1 183 47.0
BolC3t21183H Brassica oleracea HOM05D004507 ORTHO05D004874 8.1e-29 131.3 184 47.3
Lalb_Chr07g0180071 Lupinus albus HOM05D004507 ORTHO05D004874 8.1e-29 131.3 187 43.9
MD13G1260000 Malus domestica HOM05D004507 ORTHO05D004874 1.8e-28 130.2 173 49.1
ATR0580G302 Amborella trichopoda HOM05D004507 ORTHO05D004874 3.1e-28 129.4 174 43.7
CARHR238310 Cardamine hirsuta HOM05D004507 ORTHO05D004874 3.1e-28 129.4 184 45.1
SGA_v2.0_scaffold66G22517 Striga asiatica HOM05D004507 ORTHO05D004874 5.2e-28 128.6 184 44.6
A01p07760 Brassica napus HOM05D004507 ORTHO05D004874 8.9e-28 127.9 183 45.4
BraA01t00720Z Brassica rapa HOM05D004507 ORTHO05D004874 8.9e-28 127.9 183 45.4
MSTRG.19674 Avicennia marina HOM05D004507 ORTHO05D004874 1.2e-27 127.5 185 44.3
MD16G1262200 Malus domestica HOM05D004507 ORTHO05D004874 1.2e-27 127.5 168 50.6
BcaC09g51830 Brassica carinata HOM05D004507 ORTHO05D004874 2.0e-27 126.7 183 43.7
BolC1t00847H Brassica oleracea HOM05D004507 ORTHO05D004874 2.0e-27 126.7 183 43.7
BcaB03g12646 Brassica carinata HOM05D004507 ORTHO05D004874 2.6e-27 126.3 183 45.4
BcaB03g12647 Brassica carinata HOM05D004507 ORTHO05D004874 2.6e-27 126.3 183 45.4
CsaV3_2G007890 Cucumis sativus L. HOM05D004507 ORTHO05D004874 2.6e-27 126.3 182 45.6
Thhalv10026358m.g Eutrema salsugineum HOM05D004507 ORTHO05D004874 2.6e-27 126.3 184 44.0
AT4G30410 Arabidopsis thaliana HOM05D004507 ORTHO05D004874 4.4e-27 125.6 184 44.0
C01p08650 Brassica napus HOM05D004507 ORTHO05D004874 4.4e-27 125.6 183 43.2
AL7G21740 Arabidopsis lyrata HOM05D004507 ORTHO05D004874 5.8e-27 125.2 184 44.0
THA.LOC104803927 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 2.2e-26 123.2 191 42.9
Carub.0007s1019 Capsella rubella HOM05D004507 ORTHO05D004874 2.9e-26 122.9 183 43.7
MELO3C004096.2 Cucumis melo HOM05D004507 ORTHO05D004874 4.9e-26 122.1 180 44.4
AUR62039753 Chenopodium quinoa HOM05D004507 ORTHO05D004874 2.4e-25 119.8 156 45.5
AUR62028409 Chenopodium quinoa HOM05D004507 ORTHO05D004874 5.4e-25 118.6 156 45.5
CDE05G1486 Ceratophyllum demersum HOM05D004507 ORTHO05D004874 1.2e-24 117.5 158 44.9
THA.LOC104817812 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 1.6e-24 117.1 170 42.4
HanXRQChr12g0358031 Helianthus annuus HOM05D004507 ORTHO05D004874 2.1e-24 116.7 156 48.1
Sed0015365 Sechium edule HOM05D004507 ORTHO05D004874 7.8e-24 114.8 178 44.9
Aa31LG2G20120 Aethionema arabicum HOM05D004507 ORTHO05D004874 1.3e-23 114.0 191 38.7
Sed0016375 Sechium edule HOM05D004507 ORTHO05D004874 1.3e-23 114.0 178 43.3
CDE02G1288 Ceratophyllum demersum HOM05D004507 ORTHO05D004874 6.6e-23 111.7 168 42.3
Cc06_g14060 Coffea canephora HOM05D004507 ORTHO05D004874 9.6e-22 107.8 181 41.4
GSVIVG01023743001 Vitis vinifera HOM05D004507 ORTHO05D004874 9.6e-22 107.8 88 60.2
SHI49167 Sapria himalayana HOM05D004507 ORTHO05D004874 2.8e-21 106.3 185 41.1
BcaC04g19929 Brassica carinata HOM05D004507 ORTHO05D004874 1.4e-20 104.0 179 41.9
BolC9t57818H Brassica oleracea HOM05D004507 ORTHO05D004874 1.4e-20 104.0 179 41.9
BcaB08g36143 Brassica carinata HOM05D004507 ORTHO05D004874 1.8e-20 103.6 173 41.6
A10p15150 Brassica napus HOM05D004507 ORTHO05D004874 1.8e-20 103.6 179 41.3
BraA10t43598Z Brassica rapa HOM05D004507 ORTHO05D004874 1.8e-20 103.6 179 41.3
unitig_62.g23492 Utricularia gibba HOM05D004507 ORTHO05D004874 1.8e-20 103.6 181 37.0
C09p49660 Brassica napus HOM05D004507 ORTHO05D004874 3.1e-20 102.8 179 40.2
AL8G33810 Arabidopsis lyrata HOM05D004507 ORTHO05D004874 5.3e-20 102.1 187 39.0
AT5G57780 Arabidopsis thaliana HOM05D004507 ORTHO05D004874 1.5e-19 100.5 179 39.7
Carub.0008s1829 Capsella rubella HOM05D004507 ORTHO05D004874 2.6e-19 99.8 182 37.9
Thhalv10014877m.g Eutrema salsugineum HOM05D004507 ORTHO05D004874 4.4e-19 99.0 187 38.0
CARHR271510 Cardamine hirsuta HOM05D004507 ORTHO05D004874 1.7e-18 97.1 187 38.5
Sp6g19460 Schrenkiella parvula HOM05D004507 ORTHO05D004874 2.9e-18 96.3 173 39.9
Zm00001eb412560 Zea mays HOM05D004507 ORTHO05D004874 4.9e-18 95.5 197 33.5
CANSAT11G0203 Cannabis sativa HOM05D004507 ORTHO05D004874 7.1e-17 91.7 187 34.8
Os02g0178700 Oryza sativa ssp. japonica HOM05D004507 ORTHO05D004874 1.9e-14 83.6 190 35.3
CDE02G3054 Ceratophyllum demersum HOM05D001966 ORTHO05D011119 1.6e-13 80.5 121 40.5
ClCG11G012600 Citrullus lanatus HOM05D004507 ORTHO05D004874 2.1e-13 80.1 141 39.7
Os02g0791300 Oryza sativa ssp. japonica HOM05D004507 ORTHO05D004874 2.4e-12 76.6 175 33.7
SEGI_26334 Sequoiadendron giganteum HOM05D000047 ORTHO05D000044 5.3e-12 75.5 184 29.9
SalBow1G3357 Salvia bowleyana HOM05D004507 ORTHO05D004874 1.5e-11 73.9 59 55.9
Zm00001eb389070 Zea mays HOM05D004507 ORTHO05D004874 7.6e-11 71.6 185 29.2
Solyc07g006310.1 Solanum lycopersicum HOM05D004507 ORTHO05D004874 1.3e-10 70.9 46 76.1
SEGI_00160 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 1.1e-09 67.8 202 29.7
BcaB01g04486 Brassica carinata HOM05D004507 ORTHO05D004874 2.4e-09 66.6 112 32.1
SEGI_14977 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 5.4e-09 65.5 192 29.2
SEGI_39312 Sequoiadendron giganteum HOM05D004507 ORTHO05D004874 1.2e-08 64.3 164 29.9
Zm00001eb178020 Zea mays HOM05D004507 ORTHO05D004874 2.7e-08 63.2 178 27.0
SEGI_00453 Sequoiadendron giganteum HOM05D001624 ORTHO05D001530 4.6e-08 62.4 184 30.4
Os06g0653200 Oryza sativa ssp. japonica HOM05D004507 ORTHO05D004874 1.0e-07 61.2 159 30.2
SHI24757 Sapria himalayana HOM05D004507 ORTHO05D004874 1.0e-07 61.2 66 47.0
SEGI_03314 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 1.0e-07 61.2 147 31.3
Zm00001eb192600 Zea mays HOM05D004507 ORTHO05D004874 1.0e-07 61.2 184 29.9
Aa31LG8G4120 Aethionema arabicum HOM05D001624 ORTHO05D001530 3.0e-07 59.7 150 30.7
SHI24759 Sapria himalayana HOM05D016562 ORTHO05D004874 5.1e-07 58.9 45 66.7
Zm00001eb233860 Zea mays HOM05D004507 ORTHO05D004874 6.7e-07 58.5 207 26.6
DCAR_023362 Daucus carota HOM05D001624 ORTHO05D001530 1.5e-06 57.4 156 32.7
unitig_37.g12687 Utricularia gibba HOM05D004507 ORTHO05D004874 1.5e-06 57.4 73 39.7
SEGI_10463 Sequoiadendron giganteum HOM05D058585 ORTHO05D050936 1.9e-06 57.0 193 29.0
SEGI_25117 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 1.9e-06 57.0 199 27.6
AL3G17640 Arabidopsis lyrata HOM05D001624 ORTHO05D001530 3.3e-06 56.2 146 34.9
MSTRG.24824 Avicennia marina HOM05D001624 ORTHO05D001530 3.3e-06 56.2 148 31.8
Oeu001163.1 Olea europaea HOM05D001624 ORTHO05D001530 3.3e-06 56.2 167 30.5
SEGI_30051 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 3.3e-06 56.2 143 30.8
BraA01t04430Z Brassica rapa HOM05D001624 ORTHO05D001530 4.3e-06 55.8 153 32.7
PSO782G5068 Papaver somniferum HOM05D001624 ORTHO05D001530 4.3e-06 55.8 162 30.2
TAR633G2530 Trochodendron aralioides HOM05D001624 ORTHO05D001530 4.3e-06 55.8 145 31.0
PSO478G0983 Papaver somniferum HOM05D001624 ORTHO05D001530 5.6e-06 55.5 162 30.2
Lsat_1_v5_gn_5_178301 Lactuca sativa HOM05D005211 ORTHO05D006148 7.4e-06 55.1 177 27.1


User provided reference genes

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