Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0083800 Salix brachista HOM05D001111 ORTHO05D037397 2.0e-125 452.6 256 100.0
Potri.018G096600 Populus trichocarpa HOM05D001111 ORTHO05D037397 2.6e-88 329.3 207 83.1
Potri.018G096400 Populus trichocarpa HOM05D001111 ORTHO05D037397 5.1e-52 208.8 131 81.7
Sabra10G0026000 Salix brachista HOM05D001111 ORTHO05D000939 1.1e-33 147.9 212 55.2
Potri.010G041300 Populus trichocarpa HOM05D001111 ORTHO05D000939 3.8e-31 139.4 195 55.4
Manes.12G028200 Manihot esculenta HOM05D001111 ORTHO05D000939 3.8e-23 112.8 283 33.9
CiPaw.06G071600 Carya illinoinensis HOM05D001111 ORTHO05D000939 4.3e-19 99.4 297 31.3
CiPaw.05G151600 Carya illinoinensis HOM05D001111 ORTHO05D000939 1.8e-17 94.0 273 28.6
Manes.13G029800 Manihot esculenta HOM05D001111 ORTHO05D000939 2.6e-16 90.1 223 36.8
Sp5g25500 Schrenkiella parvula HOM05D001111 ORTHO05D000939 2.6e-16 90.1 248 28.6
Sed0011194 Sechium edule HOM05D001111 ORTHO05D000939 1.0e-15 88.2 206 35.4
PGR119G0161 Punica granatum HOM05D001111 ORTHO05D000939 2.2e-15 87.0 283 30.7
Thecc.02G251000 Theobroma cacao HOM05D001111 ORTHO05D000939 2.9e-15 86.7 262 29.8
Duzib268G1217 Durio zibethinus HOM05D001111 ORTHO05D000939 5.0e-15 85.9 201 30.8
Gorai.005G182000 Gossypium raimondii HOM05D001111 ORTHO05D000939 8.5e-15 85.1 202 33.7
BolC2t08816H Brassica oleracea HOM05D001111 ORTHO05D000939 1.1e-14 84.7 246 31.3
Duzib251G0551 Durio zibethinus HOM05D001111 ORTHO05D000939 1.1e-14 84.7 285 29.1
A02p16510 Brassica napus HOM05D001111 ORTHO05D000939 1.4e-14 84.3 247 27.9
BraA02t06709Z Brassica rapa HOM05D001111 ORTHO05D000939 1.4e-14 84.3 247 27.9
TWI36G1740 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 1.4e-14 84.3 130 41.5
Gorai.012G171600 Gossypium raimondii HOM05D001111 ORTHO05D000939 1.9e-14 84.0 218 31.7
TWI18G0496 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 1.9e-14 84.0 199 32.7
Sp1g21110 Schrenkiella parvula HOM05D001111 ORTHO05D000939 2.5e-14 83.6 275 30.5
Cfa009151 Carpinus fangiana HOM05D001111 ORTHO05D000939 3.2e-14 83.2 271 29.5
Gohir.D04G178500 Gossypium hirsutum HOM05D001111 ORTHO05D000939 3.2e-14 83.2 218 31.7
Thhalv10018979m.g Eutrema salsugineum HOM05D001111 ORTHO05D000939 4.2e-14 82.8 247 28.7
BcaC03g15182 Brassica carinata HOM05D001111 ORTHO05D000939 7.2e-14 82.0 246 27.2
Ciclev10032350m.g Citrus clementina HOM05D001111 ORTHO05D000939 7.2e-14 82.0 150 36.7
AL1G37460 Arabidopsis lyrata HOM05D001111 ORTHO05D000939 9.4e-14 81.6 138 38.4
Gohir.A03G139100 Gossypium hirsutum HOM05D001111 ORTHO05D000939 9.4e-14 81.6 205 40.5
Carub.0001s2323 Capsella rubella HOM05D001111 ORTHO05D000939 2.7e-13 80.1 199 40.2
CARHR024110 Cardamine hirsuta HOM05D001111 ORTHO05D000939 3.6e-13 79.7 205 42.0
Gohir.D02G162000 Gossypium hirsutum HOM05D001111 ORTHO05D000939 3.6e-13 79.7 204 32.8
AT1G23710 Arabidopsis thaliana HOM05D001111 ORTHO05D000939 4.6e-13 79.3 146 38.4
C02p27600 Brassica napus HOM05D001111 ORTHO05D000939 4.6e-13 79.3 246 27.6
CARHR063590 Cardamine hirsuta HOM05D001111 ORTHO05D000939 6.1e-13 79.0 195 44.1
Gohir.A04G135400 Gossypium hirsutum HOM05D001111 ORTHO05D000939 6.1e-13 79.0 218 30.3
Lj6P806T43 Lonicera japonica HOM05D001111 ORTHO05D000939 6.1e-13 79.0 242 28.5
FAN17G1475 Fragaria x ananassa HOM05D001111 ORTHO05D000939 1.0e-12 78.2 273 26.7
Aa31LG7G7610 Aethionema arabicum HOM05D001111 ORTHO05D000939 1.4e-12 77.8 198 33.3
BcaB05g24567 Brassica carinata HOM05D001111 ORTHO05D000939 1.8e-12 77.4 246 33.3
BcaB07g32354 Brassica carinata HOM05D001111 ORTHO05D000939 1.8e-12 77.4 270 33.7
Carub.0002s1711 Capsella rubella HOM05D001111 ORTHO05D000939 1.8e-12 77.4 269 34.2
BolC6t39498H Brassica oleracea HOM05D001111 ORTHO05D000939 3.0e-12 76.6 248 28.6
BraA07t31246Z Brassica rapa HOM05D001111 ORTHO05D000939 3.9e-12 76.3 192 32.3
A09p41100 Brassica napus HOM05D001111 ORTHO05D000939 5.1e-12 75.9 204 31.4
BcaB03g14801 Brassica carinata HOM05D001111 ORTHO05D000939 8.8e-12 75.1 250 29.2
FvH4_4g34370 Fragaria vesca HOM05D001111 ORTHO05D000939 8.8e-12 75.1 289 29.4
FAN12G3240 Fragaria x ananassa HOM05D001111 ORTHO05D000939 8.8e-12 75.1 289 29.4
AL2G29790 Arabidopsis lyrata HOM05D001111 ORTHO05D000939 1.1e-11 74.7 189 30.7
A07p36790 Brassica napus HOM05D001111 ORTHO05D000939 1.1e-11 74.7 190 31.6
C06p44280 Brassica napus HOM05D001111 ORTHO05D000939 1.1e-11 74.7 192 31.8
FAN22G0614 Fragaria x ananassa HOM05D001111 ORTHO05D000939 1.1e-11 74.7 248 29.0
BcaNung06891 Brassica carinata HOM05D001111 ORTHO05D000939 1.5e-11 74.3 191 31.4
C05p22910 Brassica napus HOM05D001111 ORTHO05D000939 1.5e-11 74.3 191 31.4
BolC5t30991H Brassica oleracea HOM05D001111 ORTHO05D000939 1.5e-11 74.3 191 31.4
AT1G70420 Arabidopsis thaliana HOM05D001111 ORTHO05D000939 2.5e-11 73.6 252 28.6
BraA09t39602Z Brassica rapa HOM05D001111 ORTHO05D000939 2.5e-11 73.6 205 32.2
Cpa.g.sc69.47 Carica papaya HOM05D001111 ORTHO05D000939 4.3e-11 72.8 225 34.7
PGSC0003DMG400003250 Solanum tuberosum HOM05D001111 ORTHO05D000939 5.7e-11 72.4 174 33.3
TAR622G0132 Trochodendron aralioides HOM05D001111 ORTHO05D000939 5.7e-11 72.4 209 29.7
Atru.chr11.2037 Acer truncatum HOM05D001111 ORTHO05D000939 7.4e-11 72.0 188 31.4
QL03p060170 Quercus lobata HOM05D001111 ORTHO05D000939 7.4e-11 72.0 176 35.8
Ca_03154_v3 Cicer arietinum L. HOM05D001111 ORTHO05D000939 9.7e-11 71.6 248 26.2
MD13G1092700 Malus domestica HOM05D001111 ORTHO05D000939 9.7e-11 71.6 207 31.4
THA.LOC104822146 Tarenaya hassleriana HOM05D001111 ORTHO05D000939 9.7e-11 71.6 199 27.6
BcaC08g46484 Brassica carinata HOM05D001111 ORTHO05D000939 1.7e-10 70.9 250 28.4
Dinv24843 Davidia involucrata HOM05D001111 ORTHO05D000939 1.7e-10 70.9 274 28.8
Prupe.1G253100 Prunus persica HOM05D001111 ORTHO05D000939 2.2e-10 70.5 209 30.6
SGA_v2.0_scaffold165G38234 Striga asiatica HOM05D001111 ORTHO05D000939 2.2e-10 70.5 177 33.9
Thhalv10008273m.g Eutrema salsugineum HOM05D001111 ORTHO05D000939 2.8e-10 70.1 272 28.7
Oeu054059.1 Olea europaea HOM05D001111 ORTHO05D000939 2.8e-10 70.1 190 28.4
Glyma.01G030300 Glycine max HOM05D001111 ORTHO05D000939 4.8e-10 69.3 184 36.4
ClCG08G018030 Citrullus lanatus HOM05D001111 ORTHO05D000939 6.3e-10 68.9 211 35.1
CsaV3_3G025060 Cucumis sativus L. HOM05D001111 ORTHO05D000939 6.3e-10 68.9 150 38.7
Lalb_Chr16g0387341 Lupinus albus HOM05D001111 ORTHO05D000939 1.1e-09 68.2 140 35.0
Peaxi162Scf00710g00051 Petunia axillaris HOM05D001111 ORTHO05D000939 1.1e-09 68.2 123 35.0
Solyc04g024780.1 Solanum lycopersicum HOM05D001111 ORTHO05D000939 1.1e-09 68.2 181 31.5
FAN07G0616 Fragaria x ananassa HOM05D001111 ORTHO05D000939 1.8e-09 67.4 271 26.6
MBI16_g32208_MAGBIO Magnolia biondii HOM05D001111 ORTHO05D000939 1.8e-09 67.4 234 28.6
Phvul.002G071000 Phaseolus vulgaris HOM05D001111 ORTHO05D000939 1.8e-09 67.4 256 27.7
Rhsim12G0118800 Rhododendron simsii HOM05D001111 ORTHO05D000939 1.8e-09 67.4 190 30.5
Sopen04g010680 Solanum pennellii HOM05D001111 ORTHO05D000939 1.8e-09 67.4 187 31.0
CANSAT01G0717 Cannabis sativa HOM05D001111 ORTHO05D000939 2.4e-09 67.0 199 32.7
Nitab4.5_0001483g0080 Nicotiana tabacum HOM05D001111 ORTHO05D000939 3.1e-09 66.6 134 33.6
Psat2g104240 Pisum sativum HOM05D001111 ORTHO05D000939 3.1e-09 66.6 191 28.8
TAR629G2362 Trochodendron aralioides HOM05D001111 ORTHO05D000939 3.1e-09 66.6 248 26.6
DCAR_024458 Daucus carota HOM05D001111 ORTHO05D000939 5.3e-09 65.9 198 35.4
RcHm_v2.0_Chr4g0443781 Rosa chinensis HOM05D001111 ORTHO05D000939 5.3e-09 65.9 293 35.5
MSTRG.7903 Avicennia marina HOM05D001111 ORTHO05D000939 6.9e-09 65.5 173 31.2
Glyma.02G035200 Glycine max HOM05D001111 ORTHO05D000939 6.9e-09 65.5 187 30.5
Aqoxy3G02945 Aquilegia oxysepala HOM05D001111 ORTHO05D000939 1.2e-08 64.7 207 28.5
MSTRG.2399 Avicennia marina HOM05D001111 ORTHO05D000939 1.2e-08 64.7 186 31.2
Nitab4.5_0000203g0250 Nicotiana tabacum HOM05D001111 ORTHO05D000939 1.2e-08 64.7 199 29.6
VMungo1215G0354 Vigna mungo HOM05D001111 ORTHO05D000939 1.2e-08 64.7 194 29.9
CAN.G300.10 Capsicum annuum HOM05D001111 ORTHO05D000939 1.5e-08 64.3 182 30.2
MELO3C012966.2 Cucumis melo HOM05D001111 ORTHO05D000939 1.5e-08 64.3 136 36.8
SGA_v2.0_scaffold63G21699 Striga asiatica HOM05D001111 ORTHO05D000939 1.5e-08 64.3 141 32.6
Cc11_g15210 Coffea canephora HOM05D001111 ORTHO05D000939 3.4e-08 63.2 202 31.2
TAR371G1086 Trochodendron aralioides HOM05D001111 ORTHO05D000939 3.4e-08 63.2 213 27.2
MD16G1093500 Malus domestica HOM05D001111 ORTHO05D000939 4.5e-08 62.8 211 30.3
unitig_22.g6937 Utricularia gibba HOM05D001111 ORTHO05D000939 4.5e-08 62.8 196 30.1
Migut.E00167 Erythranthe guttata HOM05D001111 ORTHO05D000939 5.9e-08 62.4 206 26.2
Nitab4.5_0000884g0090 Nicotiana tabacum HOM05D001111 ORTHO05D000939 5.9e-08 62.4 144 32.6
Cpa.g.sc76.61 Carica papaya HOM05D001111 ORTHO05D000939 7.7e-08 62.0 230 27.4
Duzib205G1255 Durio zibethinus HOM05D001111 ORTHO05D000939 7.7e-08 62.0 188 31.4
Migut.H00111 Erythranthe guttata HOM05D001111 ORTHO05D000939 7.7e-08 62.0 205 27.8
CDE06G0264 Ceratophyllum demersum HOM05D001111 ORTHO05D000939 1.0e-07 61.6 188 27.7
Oeu003459.1 Olea europaea HOM05D001111 ORTHO05D000939 1.0e-07 61.6 201 32.8
CDE07G0471 Ceratophyllum demersum HOM05D001111 ORTHO05D000939 1.7e-07 60.8 166 28.9
SGA_v2.0_scaffold8G04207 Striga asiatica HOM05D001111 ORTHO05D000939 1.7e-07 60.8 178 29.8
MSTRG.13369 Avicennia marina HOM05D001111 ORTHO05D000939 2.9e-07 60.1 141 34.8
Lj9P449T21 Lonicera japonica HOM05D001111 ORTHO05D000939 2.9e-07 60.1 183 29.5
Manes.14G065800 Manihot esculenta HOM05D001111 ORTHO05D000939 2.9e-07 60.1 181 29.3
Sopen05g001270 Solanum pennellii HOM05D001111 ORTHO05D000939 2.9e-07 60.1 194 30.4
TWI31G0459 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 2.9e-07 60.1 247 27.5
PGSC0003DMG400013482 Solanum tuberosum HOM05D001111 ORTHO05D000939 5.0e-07 59.3 188 29.8
Lj2g0017957 Lotus japonicus HOM05D001111 ORTHO05D000939 6.5e-07 58.9 182 29.1
ClCG05G025340 Citrullus lanatus HOM05D001111 ORTHO05D000939 8.5e-07 58.5 192 38.0
Solyc05g005260.3 Solanum lycopersicum HOM05D001111 ORTHO05D000939 8.5e-07 58.5 194 29.9
Thecc.03G012600 Theobroma cacao HOM05D001111 ORTHO05D000939 8.5e-07 58.5 147 34.0
Nn4g22768 Nelumbo nucifera HOM05D001111 ORTHO05D000939 1.1e-06 58.2 204 27.9
Nitab4.5_0000031g0470 Nicotiana tabacum HOM05D001111 ORTHO05D000939 1.1e-06 58.2 139 32.4
Dinv02893 Davidia involucrata HOM05D001111 ORTHO05D000939 4.2e-06 56.2 190 26.3
vmacro01168 Vaccinium macrocarpon HOM05D001111 ORTHO05D000939 4.2e-06 56.2 215 31.6
COL.COLO4_30037 Corchorus olitorius HOM05D001111 ORTHO05D000939 5.5e-06 55.8 199 31.2
Dinv20655 Davidia involucrata HOM05D001111 ORTHO05D000939 7.2e-06 55.5 113 31.9
SalBow2G2010 Salvia bowleyana HOM05D001111 ORTHO05D000939 7.2e-06 55.5 113 31.9
TWI23G0219 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 7.2e-06 55.5 167 28.1


User provided reference genes

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