Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0070600 Salix brachista HOM05D007491 ORTHO05D009489 3.0e-79 298.5 158 100.0
Potri.018G082800 Populus trichocarpa HOM05D007491 ORTHO05D009489 7.0e-36 154.5 96 90.6
Cfa003238 Carpinus fangiana HOM05D007491 ORTHO05D009489 1.2e-19 100.5 123 56.1
Prupe.7G233600 Prunus persica HOM05D007491 ORTHO05D009489 1.2e-19 100.5 96 66.7
Haze_25768 Corylus avellana HOM05D007491 ORTHO05D009489 2.0e-19 99.8 108 59.3
Manes.03G022800 Manihot esculenta HOM05D007491 ORTHO05D009489 1.0e-18 97.4 93 65.6
Dinv41621 Davidia involucrata HOM05D007491 ORTHO05D009489 1.7e-18 96.7 96 60.4
THA.LOC104822629 Tarenaya hassleriana HOM05D007491 ORTHO05D009489 3.3e-17 92.4 96 60.4
CiPaw.03G229400 Carya illinoinensis HOM05D007491 ORTHO05D009489 4.3e-17 92.0 96 58.3
TAR383G0584 Trochodendron aralioides HOM05D007491 ORTHO05D009489 5.6e-17 91.7 96 58.3
CSS0038485 Camellia sinensis var. sinensis HOM05D007491 ORTHO05D009489 4.7e-16 88.6 99 56.6
RcHm_v2.0_Chr2g0090011 Rosa chinensis HOM05D007491 ORTHO05D009489 1.2e-14 84.0 97 60.8
Eucgr.C03814 Eucalyptus grandis HOM05D007491 ORTHO05D009489 1.5e-14 83.6 99 58.6
ClCG11G002390 Citrullus lanatus HOM05D007491 ORTHO05D009489 2.0e-14 83.2 98 57.1
CsaV3_2G002190 Cucumis sativus L. HOM05D007491 ORTHO05D009489 2.0e-14 83.2 98 56.1
FvH4_1g04361 Fragaria vesca HOM05D007491 ORTHO05D009489 2.0e-14 83.2 96 60.4
MD15G1182000 Malus domestica HOM05D007491 ORTHO05D009489 2.6e-14 82.8 96 59.4
PGR102G1855 Punica granatum HOM05D007491 ORTHO05D009489 3.4e-14 82.4 97 54.6
FAN19G0791 Fragaria x ananassa HOM05D007491 ORTHO05D009489 5.8e-14 81.6 96 59.4
MD02G1043400 Malus domestica HOM05D007491 ORTHO05D009489 7.5e-14 81.3 96 57.3
Rhsim01G0100500 Rhododendron simsii HOM05D007491 ORTHO05D009489 7.5e-14 81.3 98 58.2
Sed0000101 Sechium edule HOM05D007491 ORTHO05D009489 1.7e-13 80.1 96 55.2
MELO3C004564.2 Cucumis melo HOM05D007491 ORTHO05D009489 2.2e-13 79.7 97 55.7
Gohir.D07G006700 Gossypium hirsutum HOM05D007491 ORTHO05D009489 2.9e-13 79.3 95 54.7
Gohir.A07G005300 Gossypium hirsutum HOM05D007491 ORTHO05D009489 3.7e-13 79.0 95 53.7
Sed0025893 Sechium edule HOM05D007491 ORTHO05D009489 3.7e-13 79.0 99 55.6
Oeu013426.2 Olea europaea HOM05D007491 ORTHO05D009489 4.9e-13 78.6 96 54.2
FAN23G1386 Fragaria x ananassa HOM05D007491 ORTHO05D009489 6.4e-13 78.2 96 54.2
Thecc.09G107500 Theobroma cacao HOM05D007491 ORTHO05D009489 6.4e-13 78.2 95 55.8
Dinv36653 Davidia involucrata HOM05D007491 ORTHO05D009489 8.3e-13 77.8 96 52.1
TPR.G23496 Trifolium pratense HOM05D007491 ORTHO05D009489 1.4e-12 77.0 95 52.6
TWI34G1809 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 1.4e-12 77.0 96 50.0
FAN26G2745 Fragaria x ananassa HOM05D001691 ORTHO05D001704 1.9e-12 76.6 95 57.9
CANSAT78G0421 Cannabis sativa HOM05D007491 ORTHO05D009489 3.2e-12 75.9 96 53.1
TWI63G0394 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 4.1e-12 75.5 98 53.1
Nn3g18087 Nelumbo nucifera HOM05D007491 ORTHO05D009489 5.4e-12 75.1 95 52.6
AT1G55205 Arabidopsis thaliana HOM05D007491 ORTHO05D009489 7.1e-12 74.7 97 52.6
Peaxi162Scf00231g00326 Petunia axillaris HOM05D007491 ORTHO05D009489 1.2e-11 73.9 97 53.6
GSVIVG01035656001 Vitis vinifera HOM05D007491 ORTHO05D009489 1.2e-11 73.9 96 51.0
Nn2g11682 Nelumbo nucifera HOM05D007491 ORTHO05D009489 1.6e-11 73.6 96 50.0
Carub.0001s4372 Capsella rubella HOM05D007491 ORTHO05D009489 2.1e-11 73.2 97 53.6
AL1G63250 Arabidopsis lyrata HOM05D007491 ORTHO05D009489 2.7e-11 72.8 99 49.5
Lsat_1_v5_gn_5_103040 Lactuca sativa HOM05D007491 ORTHO05D009489 2.7e-11 72.8 99 51.5
CARHR044840 Cardamine hirsuta HOM05D007491 ORTHO05D009489 7.8e-11 71.2 96 53.1
Duzib150G1582 Durio zibethinus HOM05D007491 ORTHO05D009489 1.0e-10 70.9 99 49.5
SHI47168 Sapria himalayana HOM05D007491 ORTHO05D009489 1.3e-10 70.5 103 50.5
Carub.0003s1318 Capsella rubella HOM05D007491 ORTHO05D009489 1.7e-10 70.1 96 52.1
Glyma.08G037500 Glycine max HOM05D007491 ORTHO05D009489 1.7e-10 70.1 96 50.0
VMungo0251G1641 Vigna mungo HOM05D007491 ORTHO05D009489 1.7e-10 70.1 95 50.5
Ca_17329_v3 Cicer arietinum L. HOM05D007491 ORTHO05D009489 2.3e-10 69.7 103 49.5
Thhalv10021835m.g Eutrema salsugineum HOM05D007491 ORTHO05D009489 2.3e-10 69.7 97 49.5
Glyma.05G230000 Glycine max HOM05D007491 ORTHO05D009489 2.3e-10 69.7 96 47.9
Gohir.D06G094200 Gossypium hirsutum HOM05D007491 ORTHO05D009489 2.3e-10 69.7 100 49.0
Gorai.010G108700 Gossypium raimondii HOM05D007491 ORTHO05D009489 2.3e-10 69.7 100 49.0
Hma1.2p1_1463F.1_g285180 Hydrangea macrophylla HOM05D007491 ORTHO05D009489 2.3e-10 69.7 91 48.4
Manes.16G071301 Manihot esculenta HOM05D007491 ORTHO05D009489 2.3e-10 69.7 97 49.5
TWI32G0642 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 2.3e-10 69.7 96 46.9
Cc06_g09900 Coffea canephora HOM05D007491 ORTHO05D009489 3.0e-10 69.3 95 49.5
Phvul.002G312200 Phaseolus vulgaris HOM05D007491 ORTHO05D009489 3.0e-10 69.3 96 49.0
Psat7g015280 Pisum sativum HOM05D007491 ORTHO05D009489 3.9e-10 68.9 96 50.0
C06p10160 Brassica napus HOM05D007491 ORTHO05D009489 5.1e-10 68.6 97 49.5
COL.COLO4_18682 Corchorus olitorius HOM05D007491 ORTHO05D009489 5.1e-10 68.6 100 48.0
Lalb_Chr16g0388121 Lupinus albus HOM05D007491 ORTHO05D009489 5.1e-10 68.6 96 47.9
Duzib187G0523 Durio zibethinus HOM05D007491 ORTHO05D009489 6.6e-10 68.2 98 48.0
AT3G13674 Arabidopsis thaliana HOM05D007491 ORTHO05D009489 8.6e-10 67.8 98 50.0
Ciclev10010011m.g Citrus clementina HOM05D007491 ORTHO05D009489 8.6e-10 67.8 99 54.5
Gorai.001G006300 Gossypium raimondii HOM05D007491 ORTHO05D009489 8.6e-10 67.8 91 50.5
CARHR088390 Cardamine hirsuta HOM05D007491 ORTHO05D009489 1.1e-09 67.4 96 50.0
Thhalv10011893m.g Eutrema salsugineum HOM05D007491 ORTHO05D009489 1.9e-09 66.6 97 48.5
Medtr8g103300 Medicago truncatula HOM05D007491 ORTHO05D009489 1.9e-09 66.6 94 50.0
A06p00340 Brassica napus HOM05D007491 ORTHO05D009489 3.3e-09 65.9 97 48.5
BraA06t23249Z Brassica rapa HOM05D007491 ORTHO05D009489 3.3e-09 65.9 97 48.5
CDE05G0808 Ceratophyllum demersum HOM05D007491 ORTHO05D009489 5.6e-09 65.1 77 51.9
Sp1g40890 Schrenkiella parvula HOM05D007491 ORTHO05D009489 7.3e-09 64.7 96 47.9
BcaB04g16984 Brassica carinata HOM05D007491 ORTHO05D009489 9.5e-09 64.3 96 51.0
Thecc.09G041400 Theobroma cacao HOM05D007491 ORTHO05D009489 9.5e-09 64.3 98 46.9
BcaC01g01475 Brassica carinata HOM05D007491 ORTHO05D009489 1.6e-08 63.5 113 43.4
C03p92400 Brassica napus HOM05D007491 ORTHO05D009489 1.6e-08 63.5 113 43.4
CDE05G2495 Ceratophyllum demersum HOM05D001777 ORTHO05D001809 1.6e-08 63.5 95 45.3
Lj2g0023927 Lotus japonicus HOM05D007491 ORTHO05D009489 1.6e-08 63.5 74 52.7
PSO782G0237 Papaver somniferum HOM05D007491 ORTHO05D009489 2.1e-08 63.2 97 50.5
BolC6t36089H Brassica oleracea HOM05D000490 ORTHO05D000785 2.8e-08 62.8 88 47.7
Lalb_Chr05g0222981 Lupinus albus HOM05D007491 ORTHO05D009489 2.8e-08 62.8 95 46.3
MBI01_g30748_MAGBIO Magnolia biondii HOM05D007491 ORTHO05D009489 3.6e-08 62.4 88 46.6
HanXRQChr12g0355021 Helianthus annuus HOM05D007491 ORTHO05D009489 6.2e-08 61.6 95 45.3
AUR62009312 Chenopodium quinoa HOM05D007491 ORTHO05D009489 1.1e-07 60.8 123 41.5
Gohir.A06G094700 Gossypium hirsutum HOM05D007491 ORTHO05D009489 1.1e-07 60.8 106 44.3
PSO566G0269 Papaver somniferum HOM05D007491 ORTHO05D009489 1.1e-07 60.8 96 50.0
BolC3t21548H Brassica oleracea HOM05D007491 ORTHO05D009489 1.4e-07 60.5 100 45.0
Lsat_1_v5_gn_5_33441 Lactuca sativa HOM05D007491 ORTHO05D009489 2.3e-07 59.7 92 47.8
HanXRQChr10g0318621 Helianthus annuus HOM05D007491 ORTHO05D009489 3.1e-07 59.3 96 45.8
ECA234G1405 Erigeron canadensis HOM05D007491 ORTHO05D009489 4.0e-07 58.9 95 43.2
A08p00850 Brassica napus HOM05D007491 ORTHO05D009489 8.9e-07 57.8 98 45.9
BraA08t32143Z Brassica rapa HOM05D007491 ORTHO05D009489 8.9e-07 57.8 98 45.9
Lj4g0004733 Lotus japonicus HOM05D007491 ORTHO05D009489 1.5e-06 57.0 58 55.2
Ciclev10010763m.g Citrus clementina HOM05D007491 ORTHO05D009489 2.6e-06 56.2 50 64.0
Ah.16g106040 Amaranthus hybridus HOM05D007491 ORTHO05D009489 9.9e-06 54.3 97 43.3
EL10Ac2g04054 Beta vulgaris HOM05D007491 ORTHO05D009489 9.9e-06 54.3 95 43.2


User provided reference genes

Program Settings