Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0062600 Salix brachista HOM05D008081 ORTHO05D010223 4.8e-235 817.4 393 100.0
Potri.018G071900 Populus trichocarpa HOM05D008081 ORTHO05D010223 4.9e-187 657.9 395 79.7
Manes.14G127800 Manihot esculenta HOM05D008081 ORTHO05D010223 2.5e-135 486.1 394 59.4
COL.COLO4_34977 Corchorus olitorius HOM05D008081 ORTHO05D010223 1.2e-121 440.7 397 56.9
Duzib168G0460 Durio zibethinus HOM05D008081 ORTHO05D010223 1.1e-119 434.1 395 56.2
Ciclev10008639m.g Citrus clementina HOM05D008081 ORTHO05D010223 4.3e-119 432.2 395 54.7
Thecc.09G118700 Theobroma cacao HOM05D008081 ORTHO05D010223 1.6e-118 430.3 395 55.9
PGR142G1327 Punica granatum HOM05D008081 ORTHO05D010223 1.0e-115 421.0 396 54.5
QL02p086958 Quercus lobata HOM05D008081 ORTHO05D010223 3.8e-115 419.1 400 52.5
Hma1.2p1_0018F.1_g012950 Hydrangea macrophylla HOM05D008081 ORTHO05D010223 5.0e-115 418.7 400 50.5
Glyma.06G213000 Glycine max HOM05D008081 ORTHO05D010223 3.2e-114 416.0 410 53.9
Atru.chr7.1264 Acer truncatum HOM05D008081 ORTHO05D010223 7.2e-114 414.8 406 50.5
DCAR_009223 Daucus carota HOM05D008081 ORTHO05D010223 7.2e-114 414.8 406 51.2
Psat1g025520 Pisum sativum HOM05D008081 ORTHO05D010223 1.6e-113 413.7 397 53.7
Phvul.009G199400 Phaseolus vulgaris HOM05D008081 ORTHO05D010223 2.7e-113 412.9 400 54.2
Ca_02616_v3 Cicer arietinum L. HOM05D008081 ORTHO05D010223 1.0e-112 411.0 405 54.8
Medtr2g055250 Medicago truncatula HOM05D008081 ORTHO05D010223 3.9e-112 409.1 399 53.1
Nitab4.5_0000282g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 8.7e-112 407.9 402 50.5
Glyma.04G150400 Glycine max HOM05D008081 ORTHO05D010223 9.7e-111 404.4 402 53.0
Lalb_Chr01g0020971 Lupinus albus HOM05D008081 ORTHO05D010223 9.7e-111 404.4 399 53.1
CANSAT56G1336 Cannabis sativa HOM05D008081 ORTHO05D010223 1.6e-110 403.7 397 50.1
MBI04_g33811_MAGBIO Magnolia biondii HOM05D008081 ORTHO05D010223 1.6e-110 403.7 397 53.9
Cc06_g09100 Coffea canephora HOM05D008081 ORTHO05D010223 2.4e-109 399.8 405 48.4
Gorai.010G066900 Gossypium raimondii HOM05D008081 ORTHO05D010223 6.9e-109 398.3 398 51.8
Nn2g11886 Nelumbo nucifera HOM05D008081 ORTHO05D010223 6.9e-109 398.3 399 52.4
Lj1g0011101 Lotus japonicus HOM05D008081 ORTHO05D010223 1.5e-108 397.1 410 51.7
Gohir.A06G059000 Gossypium hirsutum HOM05D008081 ORTHO05D010223 2.0e-108 396.7 398 51.8
Eucgr.L02382 Eucalyptus grandis HOM05D008081 ORTHO05D010223 3.4e-108 396.0 401 50.4
Gohir.D06G057200 Gossypium hirsutum HOM05D008081 ORTHO05D010223 2.2e-107 393.3 398 51.3
VMungo1309G1591 Vigna mungo HOM05D008081 ORTHO05D010223 3.8e-107 392.5 404 51.5
TWI34G1060 Tripterygium wilfordii HOM05D008081 ORTHO05D010223 5.5e-106 388.7 383 51.4
GSVIVG01015465001 Vitis vinifera HOM05D008081 ORTHO05D010223 7.2e-106 388.3 381 50.9
HanXRQChr10g0316871 Helianthus annuus HOM05D008081 ORTHO05D010223 9.4e-106 387.9 404 48.8
ECA234G2703 Erigeron canadensis HOM05D008081 ORTHO05D010223 1.4e-104 384.0 411 48.2
Lsat_1_v5_gn_5_98420 Lactuca sativa HOM05D008081 ORTHO05D010223 1.4e-104 384.0 400 48.8
PSO765G0202 Papaver somniferum HOM05D008081 ORTHO05D010223 7.4e-103 378.3 402 48.5
TAR383G0366 Trochodendron aralioides HOM05D008081 ORTHO05D010223 3.1e-101 372.9 381 51.4
Aqoxy7G01970 Aquilegia oxysepala HOM05D008081 ORTHO05D010223 4.1e-101 372.5 407 48.2
PSO349G0241 Papaver somniferum HOM05D008081 ORTHO05D010223 1.5e-100 370.5 402 47.8
Sopen08g011800 Solanum pennellii HOM05D008081 ORTHO05D010223 7.7e-100 368.2 405 45.2
Solyc08g041700.1 Solanum lycopersicum HOM05D008081 ORTHO05D010223 2.2e-99 366.7 405 44.9
PGSC0003DMG400015624 Solanum tuberosum HOM05D008081 ORTHO05D010223 2.2e-99 366.7 396 46.0
Cpa.g.sc75.87 Carica papaya HOM05D008081 ORTHO05D010223 2.0e-95 353.6 371 50.4
Oeu032197.1 Olea europaea HOM05D008081 ORTHO05D010223 2.8e-94 349.7 390 47.4
Nitab4.5_0003085g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 6.3e-94 348.6 367 48.0
Sp6g24410 Schrenkiella parvula HOM05D008081 ORTHO05D010223 1.5e-90 337.4 394 44.4
CSS0001106 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 7.2e-90 335.1 326 49.7
CSS0008637 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 8.0e-89 331.6 326 49.4
Thhalv10013658m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 8.0e-89 331.6 397 44.3
AT5G19970 Arabidopsis thaliana HOM05D008081 ORTHO05D010223 1.0e-88 331.3 396 43.9
A02p05940 Brassica napus HOM05D008081 ORTHO05D010223 1.8e-88 330.5 394 43.4
BraA02t05546Z Brassica rapa HOM05D008081 ORTHO05D010223 1.8e-88 330.5 394 43.4
Os01g0647000 Oryza sativa ssp. japonica HOM05D008081 ORTHO05D010223 1.8e-88 330.5 383 46.7
BolC2t06998H Brassica oleracea HOM05D008081 ORTHO05D010223 4.0e-88 329.3 394 43.7
Carub.0006s1834 Capsella rubella HOM05D008081 ORTHO05D010223 8.8e-88 328.2 396 43.9
BNapus_Darmor_BZH_scaffold_38p01920 Brassica napus HOM05D008081 ORTHO05D010223 1.5e-87 327.4 394 43.4
CSS0031360 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 4.5e-84 315.8 326 48.8
Actinidia09389 Actinidia chinensis HOM05D008081 ORTHO05D010223 5.9e-84 315.5 401 42.4
Zm00001eb158500 Zea mays HOM05D008081 ORTHO05D010223 2.9e-83 313.2 410 44.1
Eucgr.C01103 Eucalyptus grandis HOM05D008081 ORTHO05D010223 1.9e-82 310.5 330 47.9
Dinv36582 Davidia involucrata HOM05D008081 ORTHO05D010223 4.2e-82 309.3 317 51.1
AL6G31500 Arabidopsis lyrata HOM05D008081 ORTHO05D010223 4.8e-78 295.8 371 43.1
THA.LOC104815107 Tarenaya hassleriana HOM05D008081 ORTHO05D010223 1.4e-77 294.3 389 40.1
Thhalv10013905m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 7.0e-77 292.0 369 41.7
CARHR192880 Cardamine hirsuta HOM05D008081 ORTHO05D010223 9.1e-77 291.6 370 42.2
Aa31LG4G11630 Aethionema arabicum HOM05D008081 ORTHO05D010223 7.7e-76 288.5 355 43.4
Peaxi162Scf00292g00051 Petunia axillaris HOM05D008081 ORTHO05D010223 8.6e-75 285.0 310 47.1
ATR0083G076 Amborella trichopoda HOM05D008081 ORTHO05D010223 2.0e-68 263.8 380 38.9
CSS0020794 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 1.2e-63 248.1 394 37.3
TPR.G30892 Trifolium pratense HOM05D008081 ORTHO05D010223 1.8e-48 197.6 212 49.5
BcaB05g22890 Brassica carinata HOM05D008081 ORTHO05D010223 2.1e-41 174.1 245 38.0
BcaC03g13723 Brassica carinata HOM05D008081 ORTHO05D010223 2.6e-23 114.0 127 40.9


User provided reference genes

Program Settings