Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0060200 Salix brachista HOM05D003537 ORTHO05D004180 1.2e-83 313.2 157 100.0
Potri.018G068300 Populus trichocarpa HOM05D003537 ORTHO05D004180 2.9e-34 149.1 158 55.1
Manes.06G058601 Manihot esculenta HOM05D003537 ORTHO05D004180 1.7e-18 96.7 161 41.6
CiPaw.04G171200 Carya illinoinensis HOM05D003537 ORTHO05D004180 3.8e-18 95.5 163 42.9
QL10p023445 Quercus lobata HOM05D003537 ORTHO05D004180 1.9e-17 93.2 159 43.4
EL10Ac8g18657 Beta vulgaris HOM05D003537 ORTHO05D004180 7.2e-17 91.3 159 41.5
Gohir.A13G199600 Gossypium hirsutum HOM05D003537 ORTHO05D004180 3.6e-16 89.0 159 41.5
Haze_25576 Corylus avellana HOM05D003537 ORTHO05D004180 1.4e-15 87.0 159 40.3
Gohir.D13G205100 Gossypium hirsutum HOM05D003537 ORTHO05D004180 2.3e-15 86.3 159 41.5
Gorai.013G234000 Gossypium raimondii HOM05D003537 ORTHO05D004180 2.3e-15 86.3 159 41.5
Duzib150G0412 Durio zibethinus HOM05D003537 ORTHO05D004180 3.0e-15 85.9 159 41.5
MD02G1031600 Malus domestica HOM05D003537 ORTHO05D004180 3.0e-15 85.9 160 37.5
Actinidia21987 Actinidia chinensis HOM05D003537 ORTHO05D004180 1.5e-14 83.6 162 38.9
Cpa.g.sc75.27 Carica papaya HOM05D003537 ORTHO05D004180 4.4e-14 82.0 159 39.6
PGR142G2689 Punica granatum HOM05D003537 ORTHO05D004180 4.4e-14 82.0 159 39.0
Actinidia40471 Actinidia chinensis HOM05D003537 ORTHO05D004180 9.8e-14 80.9 161 39.1
GSVIVG01015532001 Vitis vinifera HOM05D003537 ORTHO05D004180 1.3e-13 80.5 160 36.2
Ca_21681_v3 Cicer arietinum L. HOM05D003537 ORTHO05D004180 1.7e-13 80.1 159 37.7
FAN23G0028 Fragaria x ananassa HOM05D003537 ORTHO05D004180 1.7e-13 80.1 154 39.6
Ciclev10009876m.g Citrus clementina HOM05D003537 ORTHO05D004180 2.2e-13 79.7 157 38.9
Lj4g0026965 Lotus japonicus HOM05D003537 ORTHO05D004180 2.8e-13 79.3 162 36.4
Thecc.09G126600 Theobroma cacao HOM05D003537 ORTHO05D004180 2.8e-13 79.3 159 39.0
CsaV3_2G002870 Cucumis sativus L. HOM05D003537 ORTHO05D004180 3.7e-13 79.0 163 37.4
CANSAT11G2285 Cannabis sativa HOM05D003537 ORTHO05D004180 4.9e-13 78.6 163 38.7
Hma1.2p1_0018F.1_g012400 Hydrangea macrophylla HOM05D003537 ORTHO05D004180 6.3e-13 78.2 135 36.3
Eucgr.C01175 Eucalyptus grandis HOM05D003537 ORTHO05D004180 8.3e-13 77.8 139 39.6
Gohir.A06G055900 Gossypium hirsutum HOM05D003537 ORTHO05D004180 1.4e-12 77.0 159 39.0
Gohir.D06G054550 Gossypium hirsutum HOM05D003537 ORTHO05D004180 1.8e-12 76.6 159 38.4
MELO3C004506.2 Cucumis melo HOM05D003537 ORTHO05D004180 2.4e-12 76.3 163 36.2
CSS0014531 Camellia sinensis var. sinensis HOM05D003537 ORTHO05D004180 3.1e-12 75.9 122 36.9
Medtr4g114180 Medicago truncatula HOM05D003537 ORTHO05D004180 4.1e-12 75.5 162 38.3
AL5G26940 Arabidopsis lyrata HOM05D003537 ORTHO05D004180 5.4e-12 75.1 135 34.1
Cc06_g08500 Coffea canephora HOM05D003537 ORTHO05D004180 7.0e-12 74.7 153 37.9
Glyma.17G114800 Glycine max HOM05D003537 ORTHO05D004180 7.0e-12 74.7 160 36.9
Gorai.010G063900 Gossypium raimondii HOM05D003537 ORTHO05D004180 7.0e-12 74.7 159 39.0
Lsat_1_v5_gn_7_45281 Lactuca sativa HOM05D003537 ORTHO05D004180 9.2e-12 74.3 160 35.0
Nitab4.5_0002658g0060 Nicotiana tabacum HOM05D003537 ORTHO05D004180 4.5e-11 72.0 160 35.6
TAR636G0369 Trochodendron aralioides HOM05D003537 ORTHO05D004180 1.0e-10 70.9 159 35.2
Migut.K00478 Erythranthe guttata HOM05D003537 ORTHO05D004180 5.0e-10 68.6 124 36.3
Gohir.A06G143050 Gossypium hirsutum HOM05D003537 ORTHO05D004180 5.0e-10 68.6 119 39.5
MSTRG.21979 Avicennia marina HOM05D003537 ORTHO05D004180 6.6e-10 68.2 156 32.7
Aa31LG8G16720 Aethionema arabicum HOM05D003537 ORTHO05D004180 8.6e-10 67.8 138 34.8
Lj1g0012711 Lotus japonicus HOM05D003537 ORTHO05D004180 1.1e-09 67.4 117 33.3
SGA_v2.0_scaffold12G06124 Striga asiatica HOM05D003537 ORTHO05D004180 1.5e-09 67.0 114 38.6
ATR1120G202 Amborella trichopoda HOM05D003537 ORTHO05D004180 1.9e-09 66.6 105 41.0
Haze_21529 Corylus avellana HOM05D003537 ORTHO05D004180 2.5e-09 66.2 115 34.8
Glyma.13G167200 Glycine max HOM05D003537 ORTHO05D004180 3.3e-09 65.9 150 34.7
COL.COLO4_18845 Corchorus olitorius HOM05D003537 ORTHO05D004180 4.3e-09 65.5 115 36.5
CsaV3_3G046470 Cucumis sativus L. HOM05D003537 ORTHO05D004180 4.3e-09 65.5 115 34.8
arahy.Tifrunner.gnm1.ann1.DMU7Q7 Arachis hypogaea HOM05D003537 ORTHO05D004180 5.6e-09 65.1 136 32.4
CANSAT25G1571 Cannabis sativa HOM05D003537 ORTHO05D004180 5.6e-09 65.1 117 37.6
arahy.Tifrunner.gnm1.ann1.9FI3T7 Arachis hypogaea HOM05D003537 ORTHO05D004180 7.3e-09 64.7 136 32.4
Sed0007274 Sechium edule HOM05D003537 ORTHO05D004180 9.5e-09 64.3 115 35.7
C03p67010 Brassica napus HOM05D003537 ORTHO05D004180 1.6e-08 63.5 127 33.1
BolC3t18976H Brassica oleracea HOM05D003537 ORTHO05D004180 1.6e-08 63.5 127 33.1
Manes.14G132200 Manihot esculenta HOM05D003537 ORTHO05D004180 2.1e-08 63.2 67 53.7
Psat0s2233g0360 Pisum sativum HOM05D003537 ORTHO05D004180 3.6e-08 62.4 106 34.0
QL02p021910 Quercus lobata HOM05D003537 ORTHO05D004180 4.7e-08 62.0 158 31.0
BcaC01g02287 Brassica carinata HOM05D003537 ORTHO05D004180 6.1e-08 61.6 127 33.1
Ah.14g079820 Amaranthus hybridus HOM05D003537 ORTHO05D004180 8.0e-08 61.2 139 33.1
Psat4g040120 Pisum sativum HOM05D003537 ORTHO05D004180 8.0e-08 61.2 160 33.8
SGA_v2.0_scaffold17G08031 Striga asiatica HOM05D003537 ORTHO05D004180 8.0e-08 61.2 157 33.1
TWI63G0509 Tripterygium wilfordii HOM05D003537 ORTHO05D004180 8.0e-08 61.2 159 34.0
Migut.K00479 Erythranthe guttata HOM05D003537 ORTHO05D004180 1.0e-07 60.8 119 36.1
MD15G1173100 Malus domestica HOM05D003537 ORTHO05D004180 1.0e-07 60.8 74 50.0
Sed0005083 Sechium edule HOM05D003537 ORTHO05D004180 1.0e-07 60.8 163 32.5
Lsat_1_v5_gn_8_58621 Lactuca sativa HOM05D003537 ORTHO05D004180 1.4e-07 60.5 108 38.0
TPR.G10724 Trifolium pratense HOM05D003537 ORTHO05D004180 1.4e-07 60.5 170 30.0
BcaB01g00893 Brassica carinata HOM05D003537 ORTHO05D004180 1.8e-07 60.1 122 31.1
Cfa003377 Carpinus fangiana HOM05D003537 ORTHO05D004180 1.8e-07 60.1 74 51.4
HanXRQChr16g0505371 Helianthus annuus HOM05D003537 ORTHO05D004180 4.0e-07 58.9 135 30.4
VMungo1309G0037 Vigna mungo HOM05D003537 ORTHO05D004180 4.0e-07 58.9 130 30.0
Nitab4.5_0010481g0030 Nicotiana tabacum HOM05D003537 ORTHO05D004180 6.8e-07 58.2 160 33.1
RcHm_v2.0_Chr2g0088401 Rosa chinensis HOM05D003537 ORTHO05D004180 1.2e-06 57.4 153 34.0
AUR62011130 Chenopodium quinoa HOM05D003537 ORTHO05D004180 2.0e-06 56.6 76 50.0
TAR625G0117 Trochodendron aralioides HOM05D003537 ORTHO05D004180 2.0e-06 56.6 159 32.1
arahy.Tifrunner.gnm1.ann1.F0XIJD Arachis hypogaea HOM05D003537 ORTHO05D004180 2.6e-06 56.2 163 33.1
Dinv41510 Davidia involucrata HOM05D003537 ORTHO05D004180 2.6e-06 56.2 74 48.6
ClCG11G003050 Citrullus lanatus HOM05D003537 ORTHO05D004180 4.4e-06 55.5 163 32.5
Cc08_g00790 Coffea canephora HOM05D003537 ORTHO05D004180 4.4e-06 55.5 159 30.8
arahy.Tifrunner.gnm1.ann1.P86YY0 Arachis hypogaea HOM05D003537 ORTHO05D004180 5.8e-06 55.1 163 32.5
Duzib168G0240 Durio zibethinus HOM05D003537 ORTHO05D004180 5.8e-06 55.1 75 48.0
AUR62013357 Chenopodium quinoa HOM05D003537 ORTHO05D004180 7.5e-06 54.7 76 50.0
unitig_26.g9662 Utricularia gibba HOM05D003537 ORTHO05D004180 7.5e-06 54.7 103 37.9
ECA246G5170 Erigeron canadensis HOM05D003537 ORTHO05D004180 9.8e-06 54.3 117 28.2
Nn2g12030 Nelumbo nucifera HOM05D003537 ORTHO05D004180 9.8e-06 54.3 161 33.5
Peaxi162Scf00256g00035 Petunia axillaris HOM05D003537 ORTHO05D004180 9.8e-06 54.3 103 34.0


User provided reference genes

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