Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0058300 Salix brachista HOM05D008087 ORTHO05D010187 1.9e-105 386.0 211 100.0
Potri.018G065700 Populus trichocarpa HOM05D008087 ORTHO05D010187 2.3e-98 362.5 211 93.8
Cfa002992 Carpinus fangiana HOM05D008087 ORTHO05D010187 2.8e-88 328.9 211 83.4
QL11p000704 Quercus lobata HOM05D008087 ORTHO05D010187 5.2e-87 324.7 210 82.9
Thecc.09G077500 Theobroma cacao HOM05D008087 ORTHO05D010187 2.0e-86 322.8 211 83.4
Ciclev10009482m.g Citrus clementina HOM05D008087 ORTHO05D010187 5.8e-86 321.2 211 81.5
CiPaw.03G206800 Carya illinoinensis HOM05D008087 ORTHO05D010187 1.9e-84 316.2 211 80.1
TWI34G0776 Tripterygium wilfordii HOM05D008087 ORTHO05D010187 8.6e-82 307.4 211 76.8
COL.COLO4_18101 Corchorus olitorius HOM05D008087 ORTHO05D010187 1.1e-81 307.0 211 80.1
Duzib168G2281 Durio zibethinus HOM05D008087 ORTHO05D010187 1.1e-81 307.0 211 80.1
Manes.16G095600 Manihot esculenta HOM05D008087 ORTHO05D010187 3.3e-81 305.4 211 78.2
Gorai.010G088200 Gossypium raimondii HOM05D008087 ORTHO05D010187 2.1e-80 302.8 211 78.7
CSS0002060 Camellia sinensis var. sinensis HOM05D008087 ORTHO05D010187 1.1e-79 300.4 211 76.8
Gohir.D06G075300 Gossypium hirsutum HOM05D008087 ORTHO05D010187 4.0e-79 298.5 211 78.2
Gohir.A06G076300 Gossypium hirsutum HOM05D008087 ORTHO05D010187 5.2e-79 298.1 211 77.3
CSS0037579 Camellia sinensis var. sinensis HOM05D008087 ORTHO05D010187 1.5e-78 296.6 211 76.8
Hma1.2p1_0179F.1_g079550 Hydrangea macrophylla HOM05D008087 ORTHO05D010187 3.4e-78 295.4 211 75.8
Prupe.7G199300 Prunus persica HOM05D008087 ORTHO05D010187 3.4e-78 295.4 214 78.0
Lj4P912T21 Lonicera japonica HOM05D008087 ORTHO05D010187 7.6e-78 294.3 211 74.4
Lj4g0020355 Lotus japonicus HOM05D008087 ORTHO05D010187 2.2e-77 292.7 209 74.6
MD15G1217200 Malus domestica HOM05D008087 ORTHO05D010187 6.4e-77 291.2 214 76.2
Phvul.003G131000 Phaseolus vulgaris HOM05D008087 ORTHO05D010187 6.4e-77 291.2 209 75.1
TAR383G0588 Trochodendron aralioides HOM05D008087 ORTHO05D010187 1.9e-76 289.7 211 73.9
Glyma.13G110250 Glycine max HOM05D008087 ORTHO05D010187 4.2e-76 288.5 208 73.6
Cpa.g.sc28.44 Carica papaya HOM05D008087 ORTHO05D010187 5.4e-76 288.1 212 73.6
Lalb_Chr07g0181171 Lupinus albus HOM05D008087 ORTHO05D010187 5.4e-76 288.1 209 75.1
GSVIVG01015086001 Vitis vinifera HOM05D004023 ORTHO05D004681 5.4e-76 288.1 199 77.4
Nitab4.5_0002966g0020 Nicotiana tabacum HOM05D008087 ORTHO05D010187 3.5e-75 285.4 210 74.3
Oeu049121.1 Olea europaea HOM05D008087 ORTHO05D010187 4.6e-75 285.0 209 73.2
VMungo1215G2436 Vigna mungo HOM05D008087 ORTHO05D010187 4.6e-75 285.0 209 73.2
Psat4g017680 Pisum sativum HOM05D008087 ORTHO05D010187 1.0e-74 283.9 209 74.2
Cc06_g12130 Coffea canephora HOM05D008087 ORTHO05D010187 3.9e-74 282.0 211 73.5
CANSAT56G3514 Cannabis sativa HOM05D008087 ORTHO05D010187 8.7e-74 280.8 214 73.4
Glyma.17G049450 Glycine max HOM05D008087 ORTHO05D010187 8.7e-74 280.8 208 72.1
DCAR_024749 Daucus carota HOM05D008087 ORTHO05D010187 1.5e-73 280.0 208 73.1
Eucgr.C03187 Eucalyptus grandis HOM05D008087 ORTHO05D010187 4.3e-73 278.5 211 71.1
RcHm_v2.0_Chr2g0094891 Rosa chinensis HOM05D008087 ORTHO05D010187 4.3e-73 278.5 213 76.1
MSTRG.19463 Avicennia marina HOM05D008087 ORTHO05D010187 5.6e-73 278.1 205 75.6
Nn8g38653 Nelumbo nucifera HOM05D008087 ORTHO05D010187 4.0e-71 271.9 211 71.6
Rhsim05G0007800 Rhododendron simsii HOM05D008087 ORTHO05D010187 1.2e-70 270.4 211 71.1
PGSC0003DMG400013001 Solanum tuberosum HOM05D008087 ORTHO05D010187 2.0e-70 269.6 211 69.7
Solyc07g041770.1 Solanum lycopersicum HOM05D008087 ORTHO05D010187 4.4e-70 268.5 211 68.7
Sopen07g021260 Solanum pennellii HOM05D008087 ORTHO05D010187 1.3e-69 266.9 211 69.7
arahy.Tifrunner.gnm1.ann1.TB6UZQ Arachis hypogaea HOM05D008087 ORTHO05D010187 1.7e-69 266.5 209 68.4
SalBow6G2426 Salvia bowleyana HOM05D008087 ORTHO05D010187 2.9e-69 265.8 207 71.5
Atru.chr7.1701 Acer truncatum HOM05D002335 ORTHO05D006692 4.2e-68 261.9 184 75.5
PSO135G0253 Papaver somniferum HOM05D008087 ORTHO05D010187 2.1e-67 259.6 210 67.6
AUR62028937 Chenopodium quinoa HOM05D008087 ORTHO05D010187 2.7e-67 259.2 211 65.4
TPR.G12579 Trifolium pratense HOM05D008087 ORTHO05D010187 6.0e-67 258.1 209 67.9
Migut.J00928 Erythranthe guttata HOM05D008087 ORTHO05D010187 3.0e-66 255.8 198 71.7
MBI19_g11825_MAGBIO Magnolia biondii HOM05D008087 ORTHO05D010187 1.6e-64 250.0 211 63.0
Medtr4g125370 Medicago truncatula HOM05D008087 ORTHO05D010187 8.1e-64 247.7 209 68.9
Aqoxy1G01322 Aquilegia oxysepala HOM05D008087 ORTHO05D010187 4.0e-63 245.4 209 66.0
Duzib187G0811 Durio zibethinus HOM05D008087 ORTHO05D010187 5.8e-62 241.5 159 78.6
PGR044G2582 Punica granatum HOM05D008087 ORTHO05D010187 2.9e-61 239.2 211 64.0
Sc08g0008880 Simmondsia chinensis HOM05D008087 ORTHO05D010187 1.2e-59 233.8 211 62.6
CSS0034066 Camellia sinensis var. sinensis HOM05D008087 ORTHO05D010187 2.7e-59 232.6 171 71.9
Eucgr.L02787 Eucalyptus grandis HOM05D008087 ORTHO05D010187 1.5e-57 226.9 211 62.1
Ca_21320_v3 Cicer arietinum L. HOM05D008087 ORTHO05D010187 2.5e-57 226.1 209 64.1
Ah.09g231600 Amaranthus hybridus HOM05D008087 ORTHO05D010187 3.8e-53 212.2 179 63.7
Lsat_1_v5_gn_7_35101 Lactuca sativa HOM05D004023 ORTHO05D004681 2.1e-48 196.4 195 63.6
AL5G20930 Arabidopsis lyrata HOM05D008087 ORTHO05D010187 1.0e-42 177.6 205 49.8
AT3G42725 Arabidopsis thaliana HOM05D008087 ORTHO05D010187 3.9e-42 175.6 205 49.3
THA.LOC104811009 Tarenaya hassleriana HOM05D008087 ORTHO05D010187 2.6e-38 162.9 211 47.4
Nitab4.5_0000343g0200 Nicotiana tabacum HOM05D008087 ORTHO05D010187 3.2e-36 156.0 108 75.9
Peaxi162Scf00127g00202 Petunia axillaris HOM05D008087 ORTHO05D010187 4.2e-36 155.6 108 75.0
PSO724G0984 Papaver somniferum HOM05D008087 ORTHO05D010187 1.9e-28 130.2 108 64.8
PGR044G2297 Punica granatum HOM05D008087 ORTHO05D010187 3.2e-28 129.4 127 56.7
Ah.14g084950 Amaranthus hybridus HOM05D008087 ORTHO05D010187 1.7e-24 117.1 112 58.0
Zm00001eb005810 Zea mays HOM05D008087 ORTHO05D010187 4.1e-23 112.5 207 39.6
MD15G1091800 Malus domestica HOM05D008087 ORTHO05D010187 2.6e-22 109.8 84 69.0
Dinv42391 Davidia involucrata HOM05D002335 ORTHO05D006692 1.0e-21 107.8 95 66.3
HPP92_026302 Vanilla planifolia HOM05D008087 ORTHO05D010187 4.0e-18 95.9 198 38.4
ATR0598G047 Amborella trichopoda HOM05D008087 ORTHO05D010187 3.3e-17 92.8 118 39.8
ECA240G4665 Erigeron canadensis HOM05D002335 ORTHO05D006692 6.5e-13 78.6 54 72.2
Ciclev10030215m.g Citrus clementina HOM05D008087 ORTHO05D010187 9.4e-12 74.7 167 38.9
SMO358G0701 Selaginella moellendorffii HOM05D016812 ORTHO05D010187 2.0e-09 67.0 183 30.6
Aa31LG4G13290 Aethionema arabicum HOM05D008087 ORTHO05D010187 7.5e-09 65.1 123 37.4
SEGI_14451 Sequoiadendron giganteum HOM05D003033 ORTHO05D003475 2.7e-06 56.6 194 29.9


User provided reference genes

Program Settings