Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0050000 Salix brachista HOM05D005447 ORTHO05D006730 2.4e-139 498.8 251 100.0
Potri.018G061800 Populus trichocarpa HOM05D005447 ORTHO05D006730 9.8e-133 476.9 250 95.2
Cpa.g.sc7.194 Carica papaya HOM05D005447 ORTHO05D006730 2.9e-108 395.6 243 79.8
Manes.16G078100 Manihot esculenta HOM05D005447 ORTHO05D006730 4.1e-107 391.7 247 78.1
Cfa017935 Carpinus fangiana HOM05D005447 ORTHO05D006730 2.7e-106 389.0 251 76.9
Dinv27967 Davidia involucrata HOM05D005447 ORTHO05D006730 3.3e-104 382.1 248 76.6
TWI34G1470 Tripterygium wilfordii HOM05D005447 ORTHO05D006730 1.2e-101 373.6 248 75.0
Eucgr.C03005 Eucalyptus grandis HOM05D005447 ORTHO05D006730 9.9e-101 370.5 251 72.5
Actinidia30302 Actinidia chinensis HOM05D005447 ORTHO05D006730 2.2e-100 369.4 249 74.7
QL02p001555 Quercus lobata HOM05D005447 ORTHO05D006730 2.9e-100 369.0 251 71.7
CiPaw.16G030000 Carya illinoinensis HOM05D005447 ORTHO05D006730 6.4e-100 367.9 248 73.0
Ciclev10009241m.g Citrus clementina HOM05D005447 ORTHO05D006730 6.4e-100 367.9 245 73.9
MD08G1073300 Malus domestica HOM05D005447 ORTHO05D006730 3.2e-99 365.5 249 73.5
CANSAT25G3707 Cannabis sativa HOM05D005447 ORTHO05D006730 7.1e-99 364.4 245 73.1
Hma1.2p1_1213F.1_g267530 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 4.6e-98 361.7 248 72.2
CSS0008615 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 1.0e-97 360.5 246 72.8
Hma1.2p1_2708F.1_g327220 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.3e-97 360.1 248 71.8
Cc08_g10370 Coffea canephora HOM05D005447 ORTHO05D006730 2.3e-97 359.4 248 71.0
Lj1g0020487 Lotus japonicus HOM05D005447 ORTHO05D006730 5.1e-97 358.2 249 69.9
vmacro00161 Vaccinium macrocarpon HOM05D005447 ORTHO05D006730 1.9e-96 356.3 270 67.4
Prupe.1G414700 Prunus persica HOM05D005447 ORTHO05D006730 3.3e-96 355.5 244 73.0
Sed0025565 Sechium edule HOM05D005447 ORTHO05D006730 3.3e-96 355.5 248 71.4
CSS0040006 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 5.6e-96 354.8 244 73.8
Peaxi162Scf00064g01636 Petunia axillaris HOM05D005447 ORTHO05D006730 5.6e-96 354.8 249 69.1
arahy.Tifrunner.gnm1.ann1.PT16FZ Arachis hypogaea HOM05D005447 ORTHO05D006730 7.3e-96 354.4 248 68.5
Ca_15869_v3 Cicer arietinum L. HOM05D005447 ORTHO05D006730 1.6e-95 353.2 249 69.5
Glyma.06G051000 Glycine max HOM05D005447 ORTHO05D006730 2.1e-95 352.8 252 68.3
Atru.chr7.2018 Acer truncatum HOM05D005447 ORTHO05D006730 3.6e-95 352.1 248 70.2
arahy.Tifrunner.gnm1.ann1.H6GXLW Arachis hypogaea HOM05D005447 ORTHO05D006730 4.8e-95 351.7 248 67.7
RcHm_v2.0_Chr6g0310521 Rosa chinensis HOM05D005447 ORTHO05D006730 8.1e-95 350.9 251 70.5
THA.LOC104803734 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 1.4e-94 350.1 240 71.2
VMungo1309G1567 Vigna mungo HOM05D005447 ORTHO05D006730 1.8e-94 349.7 252 65.5
Gorai.009G046500 Gossypium raimondii HOM05D005447 ORTHO05D006730 5.3e-94 348.2 243 72.4
Psat5g036560 Pisum sativum HOM05D005447 ORTHO05D006730 5.3e-94 348.2 251 67.3
Sopen12g031820 Solanum pennellii HOM05D005447 ORTHO05D006730 6.9e-94 347.8 249 67.5
HanXRQChr09g0251181 Helianthus annuus HOM05D005447 ORTHO05D006730 9.0e-94 347.4 252 69.8
Lsat_1_v5_gn_6_7400 Lactuca sativa HOM05D005447 ORTHO05D006730 9.0e-94 347.4 258 68.6
Gohir.D05G045300 Gossypium hirsutum HOM05D005447 ORTHO05D006730 1.2e-93 347.1 243 72.0
Gohir.A05G043700 Gossypium hirsutum HOM05D005447 ORTHO05D006730 1.5e-93 346.7 243 72.0
Lju3103C0G11 Lonicera japonica HOM05D005447 ORTHO05D006730 1.5e-93 346.7 272 65.8
Phvul.009G076500 Phaseolus vulgaris HOM05D005447 ORTHO05D006730 1.5e-93 346.7 249 66.7
PGSC0003DMG400029302 Solanum tuberosum HOM05D005447 ORTHO05D006730 1.5e-93 346.7 251 67.7
Thecc.09G051400 Theobroma cacao HOM05D005447 ORTHO05D006730 2.0e-93 346.3 246 71.1
Medtr3g081440 Medicago truncatula HOM05D005447 ORTHO05D006730 2.6e-93 345.9 249 67.5
Nitab4.5_0000738g0170 Nicotiana tabacum HOM05D005447 ORTHO05D006730 2.6e-93 345.9 244 68.4
MELO3C016858.2 Cucumis melo HOM05D005447 ORTHO05D006730 3.4e-93 345.5 248 68.1
Solyc12g095920.2 Solanum lycopersicum HOM05D005447 ORTHO05D006730 5.8e-93 344.7 249 67.1
Duzib168G1543 Durio zibethinus HOM05D005447 ORTHO05D006730 7.6e-93 344.4 245 71.4
Lalb_Chr08g0245101 Lupinus albus HOM05D005447 ORTHO05D006730 1.7e-92 343.2 249 66.7
CsaV3_4G035510 Cucumis sativus L. HOM05D005447 ORTHO05D006730 2.9e-92 342.4 248 67.7
Duzib187G1160 Durio zibethinus HOM05D005447 ORTHO05D006730 2.9e-92 342.4 249 70.3
Peaxi162Scf00436g00831 Petunia axillaris HOM05D005447 ORTHO05D006730 8.4e-92 340.9 248 69.0
Hund03355 Selenicereus undatus HOM05D005447 ORTHO05D006730 8.4e-92 340.9 236 68.6
Prupe.6G150100 Prunus persica HOM05D005447 ORTHO05D006730 1.1e-91 340.5 251 68.5
TAR626G0638 Trochodendron aralioides HOM05D005447 ORTHO05D006730 1.4e-91 340.1 242 70.2
EL10Ac2g03925 Beta vulgaris HOM05D005447 ORTHO05D006730 1.9e-91 339.7 248 66.1
Hma1.2p1_1944F.1_g308590 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 5.4e-91 338.2 249 71.1
Nn8g38949 Nelumbo nucifera HOM05D005447 ORTHO05D006730 5.4e-91 338.2 248 67.7
PSO832G2924 Papaver somniferum HOM05D005447 ORTHO05D006730 5.4e-91 338.2 247 68.4
C07p59440 Brassica napus HOM05D005447 ORTHO05D006730 9.3e-91 337.4 243 67.1
BolC7t46387H Brassica oleracea HOM05D005447 ORTHO05D006730 9.3e-91 337.4 243 67.1
Thhalv10025994m.g Eutrema salsugineum HOM05D005447 ORTHO05D006730 9.3e-91 337.4 243 67.9
FAN27G1388 Fragaria x ananassa HOM05D005447 ORTHO05D006730 1.2e-90 337.0 248 67.3
FvH4_2g32160 Fragaria vesca HOM05D005447 ORTHO05D006730 1.6e-90 336.7 248 67.3
PSO063G2264 Papaver somniferum HOM05D005447 ORTHO05D006730 1.6e-90 336.7 246 68.7
Hma1.2p1_0482F.1_g162683 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 4.6e-90 335.1 241 71.8
A03p61720 Brassica napus HOM05D005447 ORTHO05D006730 1.0e-89 334.0 243 66.7
CARHR240980 Cardamine hirsuta HOM05D005447 ORTHO05D006730 1.0e-89 334.0 247 66.0
BraA03t15210Z Brassica rapa HOM05D005447 ORTHO05D006730 3.0e-89 332.4 240 67.1
Aa31sc248G10 Aethionema arabicum HOM05D005447 ORTHO05D006730 5.1e-89 331.6 243 67.5
SalBow4G2766 Salvia bowleyana HOM05D005447 ORTHO05D006730 6.6e-89 331.3 248 66.9
BcaNung02148 Brassica carinata HOM05D005447 ORTHO05D006730 8.7e-89 330.9 243 66.3
AL7G18730 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 1.1e-88 330.5 241 66.8
Sp7g30740 Schrenkiella parvula HOM05D005447 ORTHO05D006730 1.9e-88 329.7 243 66.7
SGA_v2.0_scaffold1040G53805 Striga asiatica HOM05D005447 ORTHO05D006730 1.9e-88 329.7 242 66.5
Psat5g106840 Pisum sativum HOM05D005447 ORTHO05D006730 2.5e-88 329.3 250 64.8
Carub.0007s0752 Capsella rubella HOM05D005447 ORTHO05D006730 3.3e-88 328.9 245 65.3
AT4G32960 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 2.1e-87 326.2 238 66.8
ECA233G2666 Erigeron canadensis HOM05D005447 ORTHO05D006730 2.1e-87 326.2 242 66.5
PGR044G0161 Punica granatum HOM05D005447 ORTHO05D006730 2.8e-87 325.9 248 66.9
Nitab4.5_0011306g0050 Nicotiana tabacum HOM05D005447 ORTHO05D006730 4.8e-87 325.1 257 62.6
Sc06g0000920 Simmondsia chinensis HOM05D005447 ORTHO05D006730 5.3e-86 321.6 240 67.1
AUR62022047 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.5e-85 320.1 248 64.9
HPP92_026778 Vanilla planifolia HOM05D005447 ORTHO05D006730 2.6e-85 319.3 242 63.2
COL.COLO4_21030 Corchorus olitorius HOM05D005447 ORTHO05D006730 5.8e-85 318.2 236 68.2
MSTRG.11670 Avicennia marina HOM05D005447 ORTHO05D006730 2.2e-84 316.2 248 63.7
DCAR_004445 Daucus carota HOM05D005447 ORTHO05D006730 2.7e-82 309.3 240 64.6
Aqoxy6G02809 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 6.0e-82 308.1 248 62.9
Migut.A00152 Erythranthe guttata HOM05D005447 ORTHO05D006730 6.0e-82 308.1 249 62.7
Aqoxy7G03929 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 3.0e-81 305.8 248 62.9
DCAR_004444 Daucus carota HOM05D005447 ORTHO05D006730 8.7e-81 304.3 247 63.2
unitig_748.g8015 Utricularia gibba HOM05D005447 ORTHO05D006730 1.1e-80 303.9 237 65.0
Lj7C280G4 Lonicera japonica HOM05D005447 ORTHO05D006730 2.4e-78 296.2 272 59.2
THA.LOC104818575 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 1.5e-77 293.5 240 61.2
CARHR240970 Cardamine hirsuta HOM05D005447 ORTHO05D006730 7.6e-77 291.2 238 63.9
AUR62009180 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.4e-75 287.0 225 64.9
ATR0789G081 Amborella trichopoda HOM05D005447 ORTHO05D006730 3.0e-73 279.3 253 58.1
Carub.0007s0751 Capsella rubella HOM05D005447 ORTHO05D006730 5.1e-73 278.5 224 63.4
AL7G18720 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 6.7e-73 278.1 224 64.3
AT4G32970 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 2.5e-72 276.2 238 60.9
Os06g0150100 Oryza sativa ssp. japonica HOM05D005447 ORTHO05D006730 1.8e-70 270.0 273 50.2
Haze_18213 Corylus avellana HOM05D005447 ORTHO05D006730 7.6e-69 264.6 174 76.4
Zm00001eb270840 Zea mays HOM05D005447 ORTHO05D006730 5.0e-68 261.9 277 49.5
Ah.11g044670 Amaranthus hybridus HOM05D005447 ORTHO05D006730 9.7e-64 247.7 249 50.6
SEGI_08476 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 2.8e-63 246.1 223 56.1
AUR62022045 Chenopodium quinoa HOM05D005447 ORTHO05D006730 5.3e-62 241.9 174 70.1
Nitab4.5_0001179g0010 Nicotiana tabacum HOM05D005447 ORTHO05D006730 1.5e-61 240.4 198 63.6
Pp3c6_24590 Physcomitrium patens HOM05D005447 ORTHO05D006730 1.4e-59 233.8 233 54.1
CDE04G0748 Ceratophyllum demersum HOM05D005447 ORTHO05D006730 2.3e-57 226.5 178 64.6
Oeu057690.3 Olea europaea HOM05D005447 ORTHO05D006730 3.9e-57 225.7 174 67.8
ClCG05G017740 Citrullus lanatus HOM05D005447 ORTHO05D006730 6.7e-57 224.9 174 66.1
FAN15G0839 Fragaria x ananassa HOM05D005447 ORTHO05D006730 6.5e-52 208.4 149 67.8
Mapoly0129s0035 Marchantia polymorpha HOM05D005447 ORTHO05D006730 1.1e-51 207.6 234 47.4
Eucgr.C03947 Eucalyptus grandis HOM05D005447 ORTHO05D006730 2.0e-48 196.8 137 71.5
CBR_g6395 Chara braunii HOM05D005447 ORTHO05D006730 6.5e-44 181.8 246 42.7
AUR62009181 Chenopodium quinoa HOM05D005447 ORTHO05D006730 8.5e-44 181.4 130 70.0
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 9.4e-43 177.9 662 26.1
Oeu036349.1 Olea europaea HOM05D005447 ORTHO05D006730 1.4e-41 174.1 130 70.8
FAN24G0255 Fragaria x ananassa HOM05D005447 ORTHO05D006730 5.2e-41 172.2 130 67.7
FAN20G2744 Fragaria x ananassa HOM05D005447 ORTHO05D006730 1.5e-40 170.6 130 67.7
SMO367G0921 Selaginella moellendorffii HOM05D005447 ORTHO05D006730 3.3e-40 169.5 219 42.9
AagrBONN_evm.TU.Sc2ySwM_344.4531 Anthoceros agrestis HOM05D005447 ORTHO05D006730 7.5e-40 168.3 172 52.3
VMungo0251G2120 Vigna mungo HOM05D005447 ORTHO05D006730 2.5e-35 153.3 138 54.3
MSTRG.25940 Avicennia marina HOM05D005447 ORTHO05D006730 6.8e-33 145.2 109 64.2
Actinidia01202 Actinidia chinensis HOM05D005447 ORTHO05D006730 1.6e-29 134.0 81 76.5
VMungo0540G0355 Vigna mungo HOM05D005447 ORTHO05D006730 2.9e-28 129.8 109 58.7
C01p05700 Brassica napus HOM05D005447 ORTHO05D006730 2.3e-25 120.2 84 72.6
BolC1t00551H Brassica oleracea HOM05D005447 ORTHO05D006730 2.3e-25 120.2 84 72.6
GSVIVG01035346001 Vitis vinifera HOM05D005447 ORTHO05D006730 2.3e-25 120.2 93 68.8
AUR62025497 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.3e-23 114.4 75 68.0
SEGI_23140 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 1.3e-23 114.4 129 48.8
TPR.G36227 Trifolium pratense HOM05D005447 ORTHO05D006730 1.1e-22 111.3 75 64.0
SHI18783 Sapria himalayana HOM05D005447 ORTHO05D006730 5.0e-20 102.4 75 61.3
AUR62022046 Chenopodium quinoa HOM05D005447 ORTHO05D006730 5.7e-16 89.0 248 31.0
Cre13.g604850 Chlamydomonas reinhardtii HOM05D005447 ORTHO05D006730 1.1e-14 84.7 232 30.6
Gorai.010G105200 Gossypium raimondii HOM05D005447 ORTHO05D006730 3.1e-09 66.6 64 53.1
Gohir.D06G091250 Gossypium hirsutum HOM05D005447 ORTHO05D006730 4.4e-08 62.8 61 52.5
Gohir.D06G091325 Gossypium hirsutum HOM05D005447 ORTHO05D006730 4.4e-08 62.8 61 52.5


User provided reference genes

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