Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0045600 Salix brachista HOM05D005938 ORTHO05D007654 2.3e-160 568.9 310 100.0
Potri.018G047400 Populus trichocarpa HOM05D005938 ORTHO05D007654 5.8e-135 484.6 263 92.8
CiPaw.11G042800 Carya illinoinensis HOM05D005938 ORTHO05D007654 1.4e-117 426.8 306 72.2
Atru.chr9.2268 Acer truncatum HOM05D005938 ORTHO05D007654 6.0e-116 421.4 308 71.4
Ciclev10021191m.g Citrus clementina HOM05D005938 ORTHO05D007654 2.1e-113 412.9 307 71.3
QL10p016543 Quercus lobata HOM05D005938 ORTHO05D007654 3.1e-112 409.1 264 78.0
Cfa018959 Carpinus fangiana HOM05D005938 ORTHO05D007654 6.9e-112 407.9 262 79.8
Lalb_Chr08g0235801 Lupinus albus HOM05D005938 ORTHO05D007654 7.6e-111 404.4 305 68.5
Glyma.06G192800 Glycine max HOM05D005938 ORTHO05D007654 8.4e-110 401.0 306 69.0
Sc10g0009920 Simmondsia chinensis HOM05D005938 ORTHO05D007654 1.9e-109 399.8 319 64.6
CSS0017360 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 7.1e-109 397.9 301 68.1
CSS0040883 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 7.1e-109 397.9 301 68.1
arahy.Tifrunner.gnm1.ann1.VVHC1U Arachis hypogaea HOM05D005938 ORTHO05D007654 6.0e-108 394.8 304 69.4
CsaV3_1G002270 Cucumis sativus L. HOM05D005938 ORTHO05D007654 6.0e-108 394.8 297 69.4
Lj1g0012745 Lotus japonicus HOM05D005938 ORTHO05D007654 6.0e-108 394.8 305 67.5
Ca_13688_v3 Cicer arietinum L. HOM05D005938 ORTHO05D007654 1.3e-107 393.7 306 66.7
Sed0010411 Sechium edule HOM05D005938 ORTHO05D007654 1.8e-107 393.3 260 76.2
PGSC0003DMG400000598 Solanum tuberosum HOM05D005938 ORTHO05D007654 1.8e-107 393.3 264 73.9
Eucgr.A02632 Eucalyptus grandis HOM05D005938 ORTHO05D007654 3.0e-107 392.5 264 74.6
TWI15G1099 Tripterygium wilfordii HOM05D005938 ORTHO05D007654 5.1e-107 391.7 263 74.5
TAR374G0085 Trochodendron aralioides HOM05D005938 ORTHO05D007654 5.1e-107 391.7 261 76.2
TAR622G1433 Trochodendron aralioides HOM05D005938 ORTHO05D007654 5.1e-107 391.7 261 76.6
Nn3g17204 Nelumbo nucifera HOM05D005938 ORTHO05D007654 8.7e-107 391.0 264 73.5
GSVIVG01008024001 Vitis vinifera HOM05D005938 ORTHO05D007654 1.1e-106 390.6 305 67.9
Atru.BG.195.p Acer truncatum HOM05D005938 ORTHO05D007654 1.5e-106 390.2 252 79.4
Phvul.009G188150 Phaseolus vulgaris HOM05D005938 ORTHO05D007654 1.5e-106 390.2 308 68.2
arahy.Tifrunner.gnm1.ann1.KGI6NM Arachis hypogaea HOM05D005938 ORTHO05D007654 4.3e-106 388.7 308 67.5
CANSAT80G1410 Cannabis sativa HOM05D005938 ORTHO05D007654 7.4e-106 387.9 305 66.2
MELO3C017167.2 Cucumis melo HOM05D005938 ORTHO05D007654 1.3e-105 387.1 297 69.0
Nitab4.5_0004103g0010 Nicotiana tabacum HOM05D005938 ORTHO05D007654 4.8e-105 385.2 264 73.5
Actinidia34992 Actinidia chinensis HOM05D005938 ORTHO05D007654 1.1e-104 384.0 307 64.8
Solyc03g116330.3 Solanum lycopersicum HOM05D005938 ORTHO05D007654 1.1e-104 384.0 264 72.3
COL.COLO4_24542 Corchorus olitorius HOM05D005938 ORTHO05D007654 4.1e-104 382.1 265 73.2
Peaxi162Scf00274g00846 Petunia axillaris HOM05D005938 ORTHO05D007654 4.1e-104 382.1 270 73.0
TPR.G11812 Trifolium pratense HOM05D005938 ORTHO05D007654 4.1e-104 382.1 301 65.8
Cpa.g.c30141.1 Carica papaya HOM05D005938 ORTHO05D007654 1.2e-103 380.6 263 73.4
Prupe.5G190900 Prunus persica HOM05D005938 ORTHO05D007654 2.0e-103 379.8 265 72.5
Gohir.D12G179280 Gossypium hirsutum HOM05D005938 ORTHO05D007654 2.6e-103 379.4 307 65.1
CAN.G407.117 Capsicum annuum HOM05D005938 ORTHO05D007654 3.4e-103 379.0 264 72.0
Lj9A462G75 Lonicera japonica HOM05D005938 ORTHO05D007654 5.9e-103 378.3 263 70.3
Rhsim12G0157100 Rhododendron simsii HOM05D005938 ORTHO05D007654 7.6e-103 377.9 262 72.5
Hund09357 Selenicereus undatus HOM05D005938 ORTHO05D007654 1.0e-102 377.5 259 74.9
PGR083G1660 Punica granatum HOM05D005938 ORTHO05D007654 8.5e-102 374.4 313 62.3
Sopen03g035260 Solanum pennellii HOM05D005938 ORTHO05D007654 8.5e-102 374.4 253 73.1
Gohir.A12G176500 Gossypium hirsutum HOM05D005938 ORTHO05D007654 1.9e-101 373.2 308 63.6
Cc04_g16920 Coffea canephora HOM05D005938 ORTHO05D007654 3.2e-101 372.5 260 70.4
Ah.02g113360 Amaranthus hybridus HOM05D005938 ORTHO05D007654 7.2e-101 371.3 264 70.8
EL10Ac5g10981 Beta vulgaris HOM05D005938 ORTHO05D007654 7.2e-101 371.3 268 70.5
AUR62021711 Chenopodium quinoa HOM05D005938 ORTHO05D007654 9.3e-101 370.9 263 71.5
vmacro16554 Vaccinium macrocarpon HOM05D005938 ORTHO05D007654 1.2e-100 370.5 340 59.4
Nitab4.5_0002257g0140 Nicotiana tabacum HOM05D005938 ORTHO05D007654 2.7e-100 369.4 292 66.4
ECA246G4427 Erigeron canadensis HOM05D005938 ORTHO05D007654 4.6e-100 368.6 261 70.5
FAN08G1160 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.3e-99 367.1 262 69.5
RcHm_v2.0_Chr7g0181011 Rosa chinensis HOM05D005938 ORTHO05D007654 1.3e-99 367.1 262 71.0
PSO063G3647 Papaver somniferum HOM05D005938 ORTHO05D007654 3.0e-99 365.9 308 63.6
AUR62008387 Chenopodium quinoa HOM05D005938 ORTHO05D007654 8.7e-99 364.4 263 70.3
Manes.06G094000 Manihot esculenta HOM05D005938 ORTHO05D007654 8.7e-99 364.4 305 65.2
FvH4_5g15170 Fragaria vesca HOM05D005938 ORTHO05D007654 4.3e-98 362.1 259 69.5
MD14G1198100 Malus domestica HOM05D005938 ORTHO05D007654 5.7e-98 361.7 266 68.8
MD06G1191700 Malus domestica HOM05D005938 ORTHO05D007654 9.7e-98 360.9 266 70.3
Duzib205G1012 Durio zibethinus HOM05D005938 ORTHO05D007654 2.2e-97 359.8 306 64.4
ClCG06G016260 Citrullus lanatus HOM05D005938 ORTHO05D007654 3.7e-97 359.0 296 64.9
CARHR067810 Cardamine hirsuta HOM05D005938 ORTHO05D007654 4.8e-97 358.6 262 70.2
FAN13G2109 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.4e-96 357.1 255 69.8
Lsat_1_v5_gn_5_19401 Lactuca sativa HOM05D005938 ORTHO05D007654 4.1e-96 355.5 297 62.3
HanXRQChr05g0158101 Helianthus annuus HOM05D005938 ORTHO05D007654 5.3e-96 355.1 261 69.0
MSTRG.9633 Avicennia marina HOM05D005938 ORTHO05D007654 6.9e-96 354.8 258 68.2
Oeu016169.1 Olea europaea HOM05D005938 ORTHO05D007654 9.1e-96 354.4 264 68.9
FAN18G0122 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.2e-95 354.0 254 69.7
DCAR_021525 Daucus carota HOM05D005938 ORTHO05D007654 2.0e-95 353.2 277 66.8
Migut.D01830 Erythranthe guttata HOM05D005938 ORTHO05D007654 2.6e-95 352.8 260 68.8
Carub.0002s2133 Capsella rubella HOM05D005938 ORTHO05D007654 5.9e-95 351.7 261 68.6
ATR0564G381 Amborella trichopoda HOM05D005938 ORTHO05D007654 7.7e-95 351.3 261 67.0
Sp5g29710 Schrenkiella parvula HOM05D005938 ORTHO05D007654 1.3e-94 350.5 262 68.7
AL2G34410 Arabidopsis lyrata HOM05D005938 ORTHO05D007654 2.2e-94 349.7 263 67.3
A07p40340 Brassica napus HOM05D005938 ORTHO05D007654 2.9e-94 349.4 260 68.8
Thhalv10018904m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 1.1e-93 347.4 258 69.0
FAN04G0099 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.9e-93 346.7 252 69.4
SalBow7G2600 Salvia bowleyana HOM05D005938 ORTHO05D007654 1.9e-93 346.7 260 66.9
BraA07t31575Z Brassica rapa HOM05D005938 ORTHO05D007654 7.2e-93 344.7 272 65.8
Thecc.03G084300 Theobroma cacao HOM05D005938 ORTHO05D007654 7.2e-93 344.7 299 61.5
BcaC08g46988 Brassica carinata HOM05D005938 ORTHO05D007654 1.0e-91 340.9 258 67.8
BcaC08g46886 Brassica carinata HOM05D005938 ORTHO05D007654 1.8e-91 340.1 251 69.7
THA.LOC104812546 Tarenaya hassleriana HOM05D005938 ORTHO05D007654 1.8e-91 340.1 261 66.7
CDE02G0021 Ceratophyllum demersum HOM05D005938 ORTHO05D007654 5.1e-91 338.6 259 65.6
Os08g0171000 Oryza sativa ssp. japonica HOM05D005938 ORTHO05D007654 5.1e-91 338.6 261 63.6
SGA_v2.0_scaffold114G31898 Striga asiatica HOM05D005938 ORTHO05D007654 3.1e-88 329.3 258 65.9
Gorai.008G192300 Gossypium raimondii HOM05D005938 ORTHO05D007654 1.5e-87 327.0 295 60.0
Aa31LG7G3570 Aethionema arabicum HOM05D005938 ORTHO05D007654 5.9e-87 325.1 261 63.6
unitig_744.g24387 Utricularia gibba HOM05D005938 ORTHO05D007654 5.9e-87 325.1 257 64.6
Dinv38693 Davidia involucrata HOM05D005938 ORTHO05D007654 1.0e-86 324.3 244 69.7
Psat5g187160 Pisum sativum HOM05D005938 ORTHO05D007654 2.2e-86 323.2 229 71.6
Aqoxy3G03351 Aquilegia oxysepala HOM05D005938 ORTHO05D007654 8.5e-86 321.2 229 70.7
SEGI_36934 Sequoiadendron giganteum HOM05D005938 ORTHO05D007654 3.0e-83 312.8 259 61.0
BcaC08g46884 Brassica carinata HOM05D005938 ORTHO05D007654 2.2e-81 306.6 277 59.6
Mapoly0002s0073 Marchantia polymorpha HOM05D005938 ORTHO05D007654 9.1e-80 301.2 260 59.2
SHI04241 Sapria himalayana HOM05D005938 ORTHO05D007654 1.6e-79 300.4 315 52.7
Haze_07341 Corylus avellana HOM05D005938 ORTHO05D007654 4.2e-77 292.4 306 57.5
C06p48680 Brassica napus HOM05D005938 ORTHO05D007654 2.0e-74 283.5 201 71.6
Aa31LG4G4790 Aethionema arabicum HOM05D005938 ORTHO05D007654 5.3e-72 275.4 199 69.3
Medtr0036s0320 Medicago truncatula HOM05D005938 ORTHO05D007654 1.3e-70 270.8 188 72.9
BolC6t39901H Brassica oleracea HOM05D005938 ORTHO05D007654 5.0e-70 268.9 211 67.8
CSS0050188 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 3.2e-69 266.2 191 72.3
AT1G74530 Arabidopsis thaliana HOM05D005938 ORTHO05D007654 2.7e-68 263.1 205 67.3
Hma1.2p1_0735F.1_g210490 Hydrangea macrophylla HOM05D005938 ORTHO05D007654 2.8e-65 253.1 165 75.2
VMungo1309G2195 Vigna mungo HOM05D005938 ORTHO05D007654 3.7e-65 252.7 176 74.4
SMO270G0117 Selaginella moellendorffii HOM05D005938 ORTHO05D007654 1.4e-64 250.8 259 51.7
MBI02_g23681_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 2.0e-63 246.9 163 76.7
Pp3c17_15280 Physcomitrium patens HOM05D005938 ORTHO05D007654 3.8e-62 242.7 259 50.2
AagrBONN_evm.TU.Sc2ySwM_117.1670 Anthoceros agrestis HOM05D005938 ORTHO05D007654 1.6e-60 237.3 258 50.8
CBR_g66809 Chara braunii HOM05D005938 ORTHO05D007654 3.1e-56 223.0 272 42.6
FAN10G3346 Fragaria x ananassa HOM05D005938 ORTHO05D007654 8.0e-52 208.4 153 70.6
Glyma.04G170700 Glycine max HOM05D005938 ORTHO05D007654 6.6e-46 188.7 158 63.9
Zm00001eb415000 Zea mays HOM05D005938 ORTHO05D007654 9.5e-45 184.9 174 59.2
arahy.Tifrunner.gnm1.ann1.518D86 Arachis hypogaea HOM05D005938 ORTHO05D007654 9.5e-37 158.3 143 58.0
MCO16G029 Micromonas commoda HOM05D005938 ORTHO05D007654 1.7e-33 147.5 278 34.2
MBI15_g27838_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 4.9e-33 146.0 171 51.5
FAN18G0131 Fragaria x ananassa HOM05D005938 ORTHO05D007654 3.2e-32 143.3 161 53.4
QL07p001114 Quercus lobata HOM05D005938 ORTHO05D007654 1.2e-31 141.4 167 52.1
Medtr3g040450 Medicago truncatula HOM05D005938 ORTHO05D007654 4.9e-25 119.4 120 55.0
CSS0038577 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.9e-24 117.5 84 65.5
Prupe.5G190800 Prunus persica HOM05D005938 ORTHO05D007654 1.9e-24 117.5 85 67.1
Cre12.g513300 Chlamydomonas reinhardtii HOM05D005938 ORTHO05D007654 2.4e-24 117.1 208 35.1
VMungo0019G0001 Vigna mungo HOM05D005938 ORTHO05D007654 3.2e-24 116.7 142 50.0
PRCOL_00003564 Prasinoderma coloniale HOM05D005938 ORTHO05D007654 1.0e-22 111.7 246 34.6
FAN01G1759 Fragaria x ananassa HOM05D005938 ORTHO05D007654 3.9e-22 109.8 85 63.5
MD17G1094500 Malus domestica HOM05D005938 ORTHO05D007654 3.6e-20 103.2 77 70.1
QL02p071402 Quercus lobata HOM05D005938 ORTHO05D028155 1.5e-18 97.8 69 71.0
QL12p034017 Quercus lobata HOM05D000176 ORTHO05D000106 5.8e-18 95.9 68 70.6
Thhalv10000377m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 9.3e-08 62.0 90 42.2


User provided reference genes

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