Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0041600 Salix brachista HOM05D005302 ORTHO05D006422 1.3e-60 236.1 114 100.0
Sabra18G0040100 Salix brachista HOM05D005302 ORTHO05D006422 2.8e-58 228.4 111 98.2
Potri.018G040200 Populus trichocarpa HOM05D005302 ORTHO05D006422 9.2e-54 213.4 111 88.3
RcHm_v2.0_Chr6g0306001 Rosa chinensis HOM05D005302 ORTHO05D006422 6.4e-47 190.7 111 76.6
PGR044G1364 Punica granatum HOM05D005302 ORTHO05D006422 1.1e-46 189.9 112 75.9
vmacro11066 Vaccinium macrocarpon HOM05D005302 ORTHO05D006422 1.1e-46 189.9 109 78.9
FAN27G3010 Fragaria x ananassa HOM05D005302 ORTHO05D006422 1.4e-46 189.5 111 75.7
FAN20G2881 Fragaria x ananassa HOM05D005302 ORTHO05D006422 1.9e-46 189.1 111 75.7
Haze_21877 Corylus avellana HOM05D005302 ORTHO05D006422 3.2e-46 188.3 113 75.2
FAN15G3230 Fragaria x ananassa HOM05D005302 ORTHO05D006422 3.2e-46 188.3 108 76.9
FAN24G1627 Fragaria x ananassa HOM05D005302 ORTHO05D006422 3.2e-46 188.3 111 74.8
CiPaw.08G024700 Carya illinoinensis HOM05D005302 ORTHO05D006422 5.4e-46 187.6 109 74.3
Rhsim02G0179400 Rhododendron simsii HOM05D005302 ORTHO05D006422 7.0e-46 187.2 109 78.0
Actinidia13324 Actinidia chinensis HOM05D005302 ORTHO05D006422 1.2e-45 186.4 109 76.1
FvH4_2g35770 Fragaria vesca HOM05D005302 ORTHO05D006422 1.2e-45 186.4 111 74.8
Prupe.1G450300 Prunus persica HOM05D005302 ORTHO05D006422 1.6e-45 186.0 109 77.1
Dinv14245 Davidia involucrata HOM05D005302 ORTHO05D006422 2.7e-45 185.3 109 76.1
Medtr3g110160 Medicago truncatula HOM05D005302 ORTHO05D006422 3.5e-45 184.9 110 72.7
QL12p029391 Quercus lobata HOM05D005302 ORTHO05D006422 3.5e-45 184.9 108 75.0
Cfa013356 Carpinus fangiana HOM05D005302 ORTHO05D006422 4.6e-45 184.5 109 76.1
Eucgr.C02909 Eucalyptus grandis HOM05D005302 ORTHO05D006422 4.6e-45 184.5 109 78.9
MD15G1095400 Malus domestica HOM05D005302 ORTHO05D006422 4.6e-45 184.5 110 74.5
Ca_15604_v3 Cicer arietinum L. HOM05D005302 ORTHO05D006422 1.3e-44 183.0 110 72.7
Manes.16G072000 Manihot esculenta HOM05D005302 ORTHO05D006422 1.3e-44 183.0 111 74.8
Ciclev10008169m.g Citrus clementina HOM05D005302 ORTHO05D006422 5.0e-44 181.0 111 73.0
Cfa013357 Carpinus fangiana HOM05D005302 ORTHO05D006422 6.6e-44 180.6 109 73.4
TWI34G0390 Tripterygium wilfordii HOM05D005302 ORTHO05D006422 6.6e-44 180.6 111 73.9
Glyma.06G084100 Glycine max HOM05D005302 ORTHO05D006422 8.6e-44 180.3 110 74.5
Glyma.04G082500 Glycine max HOM05D005302 ORTHO05D006422 1.5e-43 179.5 110 74.5
Hma1.2p1_0393F.1_g143070 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 1.5e-43 179.5 111 72.1
Hma1.2p1_0393F.1_g143080 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 1.5e-43 179.5 111 72.1
Atru.chr7.2133 Acer truncatum HOM05D005302 ORTHO05D006422 2.5e-43 178.7 111 73.0
TAR624G0168 Trochodendron aralioides HOM05D005302 ORTHO05D006422 2.5e-43 178.7 109 72.5
Haze_21992 Corylus avellana HOM05D005302 ORTHO05D006422 3.3e-43 178.3 129 67.4
Gohir.D05G049300 Gossypium hirsutum HOM05D005302 ORTHO05D006422 3.3e-43 178.3 111 72.1
Gorai.009G050600 Gossypium raimondii HOM05D005302 ORTHO05D006422 3.3e-43 178.3 111 72.1
arahy.Tifrunner.gnm1.ann1.P7Z4SB Arachis hypogaea HOM05D005302 ORTHO05D006422 4.3e-43 177.9 111 73.0
arahy.Tifrunner.gnm1.ann1.R6A5BY Arachis hypogaea HOM05D005302 ORTHO05D006422 4.3e-43 177.9 111 73.0
CSS0024291 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 7.3e-43 177.2 109 73.4
CSS0027627 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 7.3e-43 177.2 109 73.4
Hma1.2p1_1884F.1_g306480 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 7.3e-43 177.2 111 71.2
Migut.A00220 Erythranthe guttata HOM05D005302 ORTHO05D006422 9.5e-43 176.8 109 73.4
Psat5g022320 Pisum sativum HOM05D005302 ORTHO05D006422 9.5e-43 176.8 110 70.9
Lj1g0026118 Lotus japonicus HOM05D005302 ORTHO05D006422 1.6e-42 176.0 112 69.6
Aqoxy7G03804 Aquilegia oxysepala HOM05D005302 ORTHO05D006422 2.8e-42 175.3 109 71.6
Duzib150G0232 Durio zibethinus HOM05D005302 ORTHO05D006422 2.8e-42 175.3 111 69.4
Lj1g0022106 Lotus japonicus HOM05D005302 ORTHO05D006422 2.8e-42 175.3 110 70.0
LjContig00226g0022694 Lotus japonicus HOM05D005302 ORTHO05D006422 2.8e-42 175.3 110 70.0
LjContig00518g0000858 Lotus japonicus HOM05D005302 ORTHO05D006422 2.8e-42 175.3 110 70.0
SGA_v2.0_scaffold103G29944 Striga asiatica HOM05D005302 ORTHO05D006422 3.6e-42 174.9 109 73.4
VMungo1309G1003 Vigna mungo HOM05D005302 ORTHO05D006422 1.1e-41 173.3 110 71.8
MD08G1115600 Malus domestica HOM05D005302 ORTHO05D006422 1.4e-41 172.9 111 70.3
GSVIVG01035645001 Vitis vinifera HOM05D005302 ORTHO05D006422 2.3e-41 172.2 112 70.5
CANSAT25G0630 Cannabis sativa HOM05D005302 ORTHO05D006422 3.1e-41 171.8 111 69.4
Lalb_Chr08g0243151 Lupinus albus HOM05D005302 ORTHO05D006422 3.1e-41 171.8 110 69.1
Lj1g0015489 Lotus japonicus HOM05D005302 ORTHO05D006422 5.2e-41 171.0 112 68.8
Lj7A704G80 Lonicera japonica HOM05D005302 ORTHO05D006422 1.2e-40 169.9 109 67.9
Peaxi162Scf00822g00210 Petunia axillaris HOM05D005302 ORTHO05D006422 1.2e-40 169.9 111 66.7
MSTRG.11705 Avicennia marina HOM05D005302 ORTHO05D006422 2.0e-40 169.1 109 70.6
Lj8C588T0 Lonicera japonica HOM05D005302 ORTHO05D006422 2.0e-40 169.1 112 65.2
Phvul.009G108200 Phaseolus vulgaris HOM05D005302 ORTHO05D006422 2.0e-40 169.1 110 70.0
CAN.G21.50 Capsicum annuum HOM05D005302 ORTHO05D006422 3.4e-40 168.3 111 65.8
MBI04_g05261_MAGBIO Magnolia biondii HOM05D005302 ORTHO05D006422 3.4e-40 168.3 108 69.4
Lj1g0000494 Lotus japonicus HOM05D005302 ORTHO05D006422 4.4e-40 167.9 110 68.2
Nn2g11666 Nelumbo nucifera HOM05D005302 ORTHO05D006422 4.4e-40 167.9 109 67.9
Oeu036363.2 Olea europaea HOM05D005302 ORTHO05D006422 5.8e-40 167.5 109 67.9
SalBow4G1479 Salvia bowleyana HOM05D005302 ORTHO05D006422 7.5e-40 167.2 109 65.1
Nitab4.5_0000513g0060 Nicotiana tabacum HOM05D005302 ORTHO05D006422 9.8e-40 166.8 109 67.0
Thecc.09G042800 Theobroma cacao HOM05D005302 ORTHO05D006422 1.7e-39 166.0 111 66.7
Cpa.g.sc7.259 Carica papaya HOM05D005302 ORTHO05D006422 2.2e-39 165.6 111 67.6
CiPaw.07G205300 Carya illinoinensis HOM05D005302 ORTHO05D006422 2.2e-39 165.6 109 67.0
Sopen08g022330 Solanum pennellii HOM05D005302 ORTHO05D006422 2.9e-39 165.2 112 67.0
PGSC0003DMG400029051 Solanum tuberosum HOM05D005302 ORTHO05D006422 2.9e-39 165.2 112 67.0
Nitab4.5_0010908g0010 Nicotiana tabacum HOM05D005302 ORTHO05D006422 1.1e-38 163.3 109 65.1
Gorai.001G027200 Gossypium raimondii HOM05D005302 ORTHO05D006422 1.4e-38 162.9 111 66.7
Solyc08g068570.4 Solanum lycopersicum HOM05D005302 ORTHO05D006422 1.4e-38 162.9 112 66.1
CsaV3_2G030970 Cucumis sativus L. HOM05D005302 ORTHO05D006422 3.2e-38 161.8 109 65.1
Hund19525 Selenicereus undatus HOM05D005302 ORTHO05D006422 3.2e-38 161.8 112 66.1
EL10Ac2g04046 Beta vulgaris HOM05D005302 ORTHO05D006422 5.4e-38 161.0 110 65.5
A03p61580 Brassica napus HOM05D005302 ORTHO05D006422 5.4e-38 161.0 112 65.2
BraA03t15200Z Brassica rapa HOM05D005302 ORTHO05D006422 5.4e-38 161.0 112 65.2
Gohir.A07G022700 Gossypium hirsutum HOM05D005302 ORTHO05D006422 7.1e-38 160.6 109 67.0
C07p59340 Brassica napus HOM05D005302 ORTHO05D006422 9.2e-38 160.2 112 65.2
BolC7t46379H Brassica oleracea HOM05D005302 ORTHO05D006422 9.2e-38 160.2 112 65.2
ECA246G0277 Erigeron canadensis HOM05D005302 ORTHO05D006422 9.2e-38 160.2 109 65.1
ClCG08G012300 Citrullus lanatus HOM05D005302 ORTHO05D006422 1.2e-37 159.8 109 63.3
COL.COLO4_18671 Corchorus olitorius HOM05D005302 ORTHO05D006422 1.2e-37 159.8 112 66.1
MELO3C011150.2 Cucumis melo HOM05D005302 ORTHO05D006422 1.2e-37 159.8 109 65.1
AUR62009303 Chenopodium quinoa HOM05D005302 ORTHO05D006422 1.6e-37 159.5 110 64.5
Cc07_g15020 Coffea canephora HOM05D005302 ORTHO05D006422 1.6e-37 159.5 109 66.1
Cc08_g09240 Coffea canephora HOM05D005302 ORTHO05D006422 1.6e-37 159.5 109 66.1
Gohir.D07G026100 Gossypium hirsutum HOM05D005302 ORTHO05D006422 2.7e-37 158.7 111 64.9
Sp7g30530 Schrenkiella parvula HOM05D005302 ORTHO05D006422 2.7e-37 158.7 112 64.3
PSO210G0275 Papaver somniferum HOM05D005302 ORTHO05D006422 4.6e-37 157.9 109 64.2
PSO210G3865 Papaver somniferum HOM05D005302 ORTHO05D006422 4.6e-37 157.9 109 64.2
AUR62041718 Chenopodium quinoa HOM05D005302 ORTHO05D006422 6.0e-37 157.5 110 64.5
Sed0007027 Sechium edule HOM05D005302 ORTHO05D006422 7.8e-37 157.1 109 61.5
Thhalv10025006m.g Eutrema salsugineum HOM05D005302 ORTHO05D006422 1.0e-36 156.8 112 64.3
CARHR240760 Cardamine hirsuta HOM05D005302 ORTHO05D006422 3.9e-36 154.8 112 63.4
CDE08G0186 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 3.9e-36 154.8 109 62.4
HanXRQChr08g0236291 Helianthus annuus HOM05D005302 ORTHO05D006422 6.6e-36 154.1 111 65.8
unitig_32.g11070 Utricularia gibba HOM05D005302 ORTHO05D006422 6.6e-36 154.1 107 62.6
Aa31LG2G17190 Aethionema arabicum HOM05D005302 ORTHO05D006422 1.1e-35 153.3 112 62.5
Carub.0007s0772 Capsella rubella HOM05D005302 ORTHO05D006422 1.9e-35 152.5 112 63.4
DCAR_003119 Daucus carota HOM05D005302 ORTHO05D006422 1.9e-35 152.5 109 60.6
ATR0315G120 Amborella trichopoda HOM05D005302 ORTHO05D006422 7.3e-35 150.6 109 65.1
Zm00001eb237270 Zea mays HOM05D005302 ORTHO05D006422 7.3e-35 150.6 111 59.5
AL7G18970 Arabidopsis lyrata HOM05D005302 ORTHO05D006422 1.2e-34 149.8 112 61.6
AT4G32770 Arabidopsis thaliana HOM05D005302 ORTHO05D006422 3.6e-34 148.3 112 60.7
Os02g0276500 Oryza sativa ssp. japonica HOM05D005302 ORTHO05D006422 4.7e-34 147.9 111 60.4
Gohir.A05G047400 Gossypium hirsutum HOM05D005302 ORTHO05D006422 1.8e-33 146.0 85 77.6
Lsat_1_v5_gn_5_33600 Lactuca sativa HOM05D005302 ORTHO05D006422 2.3e-33 145.6 106 65.1
Potri.006G240100 Populus trichocarpa HOM05D005302 ORTHO05D006422 4.0e-33 144.8 111 61.3
AagrBONN_evm.TU.Sc2ySwM_368.1981 Anthoceros agrestis HOM05D005302 ORTHO05D006422 7.6e-32 140.6 108 61.1
CDE05G0893 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 2.4e-30 135.6 109 51.4
SEGI_31241 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 4.1e-30 134.8 109 56.0
SMO351G0603 Selaginella moellendorffii HOM05D005302 ORTHO05D006422 3.5e-29 131.7 109 56.9
Mapoly0027s0036 Marchantia polymorpha HOM05D005302 ORTHO05D006422 2.5e-27 125.6 109 51.4
Sabra18G0041700 Salix brachista HOM05D005302 ORTHO05D006422 1.2e-26 123.2 60 93.3
Pp3c7_470 Physcomitrium patens HOM05D005302 ORTHO05D006422 2.9e-23 112.1 109 51.4
CBR_g222 Chara braunii HOM05D005302 ORTHO05D006422 6.0e-21 104.4 110 50.0
Pp3c20_5100 Physcomitrium patens HOM05D005302 ORTHO05D006422 9.6e-19 97.1 111 43.2
Cre01.g013801 Chlamydomonas reinhardtii HOM05D005302 ORTHO05D006422 2.1e-18 95.9 110 45.5
MCO11G337 Micromonas commoda HOM05D005302 ORTHO05D006422 3.2e-14 82.0 90 45.6
HPP92_005269 Vanilla planifolia HOM05D005302 ORTHO05D006422 3.2e-14 82.0 76 50.0
THA.LOC104803808 Tarenaya hassleriana HOM05D005302 ORTHO05D006422 3.5e-13 78.6 52 65.4
Sc23g0005290 Simmondsia chinensis HOM05D005302 ORTHO05D006422 1.3e-12 76.6 53 69.8
Cfa013434 Carpinus fangiana HOM05D005302 ORTHO05D006422 4.2e-06 55.1 37 75.7


User provided reference genes

Program Settings