Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 1.5e-153 546.2 291 100.0
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 2.5e-148 528.9 291 96.9
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 2.1e-139 499.2 291 91.1
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 1.7e-136 489.6 291 84.9
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 1.9e-124 449.5 295 76.9
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 2.1e-123 446.0 295 76.3
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.4e-122 443.4 295 76.3
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 2.0e-121 439.5 293 74.7
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 1.1e-119 433.7 295 74.6
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.5e-116 422.5 295 71.9
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 4.3e-116 421.8 295 71.9
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 9.7e-116 420.6 295 71.9
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 1.6e-115 419.9 295 70.8
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 2.2e-115 419.5 294 73.1
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 6.3e-115 417.9 293 71.7
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.1e-114 417.2 295 71.5
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 2.4e-114 416.0 317 69.1
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 2.4e-114 416.0 293 71.7
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 2.4e-114 416.0 295 69.8
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 6.9e-114 414.5 293 70.6
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 6.9e-114 414.5 294 72.1
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 9.0e-114 414.1 294 71.8
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 1.7e-112 409.8 293 69.6
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 2.9e-112 409.1 293 70.0
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 2.9e-112 409.1 293 70.0
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 6.5e-112 407.9 293 70.0
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 2.5e-111 406.0 291 68.7
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 3.2e-111 405.6 293 68.3
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 2.1e-110 402.9 290 70.3
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 4.6e-110 401.7 293 67.9
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 4.6e-110 401.7 290 70.0
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 1.8e-109 399.8 296 68.9
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 5.1e-109 398.3 297 67.7
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 5.1e-109 398.3 292 68.5
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 5.1e-109 398.3 279 70.3
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 6.7e-109 397.9 291 68.0
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 1.5e-108 396.7 293 68.3
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 2.5e-108 396.0 275 70.9
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 4.3e-108 395.2 295 68.5
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 5.7e-108 394.8 292 70.5
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 7.4e-108 394.4 303 66.7
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 1.3e-107 393.7 293 65.9
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 1.3e-107 393.7 294 69.7
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 1.7e-107 393.3 304 65.1
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 1.7e-107 393.3 300 65.3
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 3.7e-107 392.1 291 70.4
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 4.8e-107 391.7 295 68.1
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 8.2e-107 391.0 291 69.4
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 1.8e-106 389.8 275 70.2
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 5.3e-106 388.3 294 67.7
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 5.3e-106 388.3 293 66.6
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 9.1e-106 387.5 304 64.8
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 1.2e-105 387.1 287 67.9
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 1.2e-105 387.1 280 68.9
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 2.0e-105 386.3 292 68.5
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 2.6e-105 386.0 308 63.0
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 3.4e-105 385.6 291 68.4
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 4.5e-105 385.2 294 67.7
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 7.7e-105 384.4 291 68.7
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 2.2e-104 382.9 305 63.3
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 5.0e-104 381.7 290 67.9
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 6.5e-104 381.3 292 67.1
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 8.5e-104 380.9 308 62.7
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 2.5e-103 379.4 291 65.3
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 3.2e-103 379.0 277 69.7
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 4.2e-103 378.6 299 71.6
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 4.2e-103 378.6 308 62.3
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 5.5e-103 378.3 292 66.8
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 9.4e-103 377.5 297 65.7
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 9.4e-103 377.5 293 67.6
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 9.4e-103 377.5 293 66.9
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 2.7e-102 375.9 301 62.8
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 3.6e-102 375.6 293 67.2
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 3.6e-102 375.6 371 55.3
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 4.7e-102 375.2 295 66.4
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 6.1e-102 374.8 293 67.9
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 6.1e-102 374.8 293 67.9
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 1.8e-101 373.2 296 65.5
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 1.8e-101 373.2 277 69.3
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 1.8e-101 373.2 280 68.6
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 2.3e-101 372.9 281 64.8
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 3.0e-101 372.5 289 64.0
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 3.9e-101 372.1 305 62.3
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 3.9e-101 372.1 294 65.6
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 5.1e-101 371.7 296 65.5
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 2.0e-100 369.8 294 67.3
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 2.2e-99 366.3 290 65.2
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 3.1e-98 362.5 300 62.3
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 3.1e-98 362.5 290 64.5
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 7.0e-98 361.3 311 59.8
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 7.7e-97 357.8 446 47.1
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 1.1e-95 354.0 302 59.9
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 4.2e-95 352.1 285 68.1
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 3.6e-94 349.0 293 62.1
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 1.0e-93 347.4 270 65.6
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 3.3e-92 342.4 281 63.0
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 5.7e-92 341.7 274 64.2
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 7.0e-90 334.7 253 67.6
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 7.7e-89 331.3 294 60.9
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 2.9e-88 329.3 243 66.7
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 2.7e-86 322.8 282 62.1
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 3.7e-83 312.4 289 59.5
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 5.3e-82 308.5 275 61.1
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 2.0e-81 306.6 276 56.9
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 1.7e-80 303.5 276 56.5
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 4.2e-79 298.9 254 62.2
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.6e-78 297.0 204 72.1
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 4.7e-78 295.4 292 56.2
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 8.8e-77 291.2 284 57.4
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.5e-76 290.4 292 55.8
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 3.4e-76 289.3 210 69.0
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 3.7e-75 285.8 208 69.2
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 4.1e-74 282.3 258 58.5
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 1.0e-72 277.7 286 55.9
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 5.2e-69 265.4 272 50.4
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 4.7e-62 242.3 275 48.4
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 8.0e-62 241.5 273 48.0
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 9.2e-58 228.0 251 54.2
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 7.8e-57 224.9 166 66.9
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 3.0e-56 223.0 267 44.6
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 6.6e-56 221.9 272 44.9
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 2.5e-55 219.9 168 64.9
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 1.1e-53 214.5 168 65.5
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 2.6e-52 209.9 275 43.6
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 4.9e-51 205.7 268 44.8
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 7.8e-49 198.4 169 65.1
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 9.5e-47 191.4 263 47.1
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 2.2e-43 180.3 213 51.2
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 4.3e-39 166.0 134 64.9
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 9.9e-36 154.8 133 56.4
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.3e-32 144.4 117 62.4
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 1.4e-21 107.8 125 49.6
ATR0051G031 Amborella trichopoda HOM05D005681 ORTHO05D007274 4.6e-17 92.8 96 54.2
A03p61560 Brassica napus HOM05D005681 ORTHO05D040333 1.6e-14 84.3 239 35.1
BraA03t15198Z Brassica rapa HOM05D005681 ORTHO05D040333 6.0e-09 65.9 176 38.1
ATR0326G034 Amborella trichopoda HOM05D005681 ORTHO05D068436 3.9e-08 63.2 52 55.8


User provided reference genes

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