Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0030700 Salix brachista HOM05D003537 ORTHO05D004180 3.0e-64 248.4 133 100.0
Potri.018G028500 Populus trichocarpa HOM05D003537 ORTHO05D004180 8.5e-59 230.3 133 91.7
Manes.16G121200 Manihot esculenta HOM05D003537 ORTHO05D004180 3.2e-34 148.7 133 66.2
QL02p021910 Quercus lobata HOM05D003537 ORTHO05D004180 3.5e-28 128.6 96 63.5
COL.COLO4_18845 Corchorus olitorius HOM05D003537 ORTHO05D004180 2.2e-27 125.9 95 64.2
arahy.Tifrunner.gnm1.ann1.9FI3T7 Arachis hypogaea HOM05D003537 ORTHO05D004180 8.5e-27 124.0 91 62.6
arahy.Tifrunner.gnm1.ann1.DMU7Q7 Arachis hypogaea HOM05D003537 ORTHO05D004180 1.9e-26 122.9 91 61.5
Eucgr.C02783 Eucalyptus grandis HOM05D003537 ORTHO05D004180 3.2e-26 122.1 84 72.6
QL10p023445 Quercus lobata HOM05D003537 ORTHO05D004180 1.2e-25 120.2 101 56.4
Gohir.A06G055900 Gossypium hirsutum HOM05D003537 ORTHO05D004180 1.6e-25 119.8 102 56.9
Gohir.D06G054550 Gossypium hirsutum HOM05D003537 ORTHO05D004180 2.1e-25 119.4 102 55.9
Gohir.D13G205100 Gossypium hirsutum HOM05D003537 ORTHO05D004180 2.1e-25 119.4 102 56.9
Gorai.013G234000 Gossypium raimondii HOM05D003537 ORTHO05D004180 2.1e-25 119.4 102 56.9
Duzib150G0412 Durio zibethinus HOM05D003537 ORTHO05D004180 2.7e-25 119.0 102 57.8
Gohir.A13G199600 Gossypium hirsutum HOM05D003537 ORTHO05D004180 4.7e-25 118.2 102 55.9
Gorai.010G114400 Gossypium raimondii HOM05D003537 ORTHO05D004180 8.0e-25 117.5 133 50.4
Nn2g12030 Nelumbo nucifera HOM05D003537 ORTHO05D004180 8.0e-25 117.5 103 70.9
CANSAT25G1571 Cannabis sativa HOM05D003537 ORTHO05D004180 1.4e-24 116.7 88 63.6
Cpa.g.sc259.5 Carica papaya HOM05D003537 ORTHO05D004180 4.0e-24 115.2 128 61.7
Atru.chr7.1160 Acer truncatum HOM05D003537 ORTHO05D004180 6.8e-24 114.4 102 66.7
Manes.14G132200 Manihot esculenta HOM05D003537 ORTHO05D004180 6.8e-24 114.4 102 65.7
Cc06_g08500 Coffea canephora HOM05D003537 ORTHO05D004180 1.2e-23 113.6 84 63.1
Actinidia21987 Actinidia chinensis HOM05D003537 ORTHO05D004180 1.5e-23 113.2 82 63.4
Eucgr.C01175 Eucalyptus grandis HOM05D003537 ORTHO05D004180 2.0e-23 112.8 102 55.9
TWI34G1168 Tripterygium wilfordii HOM05D003537 ORTHO05D004180 5.7e-23 111.3 113 62.8
VMungo1309G0037 Vigna mungo HOM05D003537 ORTHO05D004180 9.8e-23 110.5 101 54.5
Actinidia40471 Actinidia chinensis HOM05D003537 ORTHO05D004180 1.7e-22 109.8 102 52.9
Ciclev10009875m.g Citrus clementina HOM05D003537 ORTHO05D004180 2.2e-22 109.4 132 56.1
Gohir.A06G098204 Gossypium hirsutum HOM05D003537 ORTHO05D004180 2.2e-22 109.4 133 47.4
Nitab4.5_0010481g0030 Nicotiana tabacum HOM05D003537 ORTHO05D004180 2.2e-22 109.4 92 64.1
CiPaw.04G171200 Carya illinoinensis HOM05D003537 ORTHO05D004180 2.8e-22 109.0 107 54.2
Thecc.09G026400 Theobroma cacao HOM05D003537 ORTHO05D004180 2.8e-22 109.0 93 72.0
Gorai.010G063900 Gossypium raimondii HOM05D003537 ORTHO05D004180 3.7e-22 108.6 102 52.9
Nitab4.5_0002658g0060 Nicotiana tabacum HOM05D003537 ORTHO05D004180 4.8e-22 108.2 92 57.6
PGR142G2689 Punica granatum HOM05D003537 ORTHO05D004180 8.3e-22 107.5 115 49.6
RcHm_v2.0_Chr6g0298061 Rosa chinensis HOM05D003537 ORTHO05D004180 8.3e-22 107.5 113 58.4
HPP92_000667 Vanilla planifolia HOM05D003537 ORTHO05D004180 8.3e-22 107.5 89 71.9
arahy.Tifrunner.gnm1.ann1.F0XIJD Arachis hypogaea HOM05D003537 ORTHO05D004180 1.1e-21 107.1 101 59.4
Manes.06G058601 Manihot esculenta HOM05D003537 ORTHO05D004180 1.1e-21 107.1 100 51.0
Prupe.1G480000 Prunus persica HOM05D003537 ORTHO05D004180 1.1e-21 107.1 115 57.4
AL5G26940 Arabidopsis lyrata HOM05D003537 ORTHO05D004180 1.4e-21 106.7 83 62.7
MD15G1124500 Malus domestica HOM05D003537 ORTHO05D004180 1.4e-21 106.7 66 74.2
ClCG11G003050 Citrullus lanatus HOM05D003537 ORTHO05D004180 1.8e-21 106.3 100 66.0
Potri.018G068300 Populus trichocarpa HOM05D003537 ORTHO05D004180 1.8e-21 106.3 77 62.3
arahy.Tifrunner.gnm1.ann1.4IXQ36 Arachis hypogaea HOM05D003537 ORTHO05D004180 2.4e-21 105.9 101 58.4
arahy.Tifrunner.gnm1.ann1.EPB35R Arachis hypogaea HOM05D003537 ORTHO05D004180 2.4e-21 105.9 101 58.4
arahy.Tifrunner.gnm1.ann1.P86YY0 Arachis hypogaea HOM05D003537 ORTHO05D004180 2.4e-21 105.9 101 58.4
Haze_21529 Corylus avellana HOM05D003537 ORTHO05D004180 2.4e-21 105.9 95 53.7
Dinv18245 Davidia involucrata HOM05D003537 ORTHO05D004180 2.4e-21 105.9 118 57.6
Lalb_Chr08g0244061 Lupinus albus HOM05D003537 ORTHO05D004180 2.4e-21 105.9 89 69.7
SGA_v2.0_scaffold12G06124 Striga asiatica HOM05D003537 ORTHO05D004180 3.1e-21 105.5 99 48.5
Solyc12g009440.2 Solanum lycopersicum HOM05D003537 ORTHO05D004180 4.1e-21 105.1 84 76.2
Sopen12g004440 Solanum pennellii HOM05D003537 ORTHO05D004180 4.1e-21 105.1 84 76.2
Glyma.04G067500 Glycine max HOM05D003537 ORTHO05D004180 5.4e-21 104.8 105 64.8
Peaxi162Scf00157g01525 Petunia axillaris HOM05D003537 ORTHO05D004180 5.4e-21 104.8 95 64.2
CiPaw.08G011800 Carya illinoinensis HOM05D003537 ORTHO05D004180 1.2e-20 103.6 93 67.7
CsaV3_3G046470 Cucumis sativus L. HOM05D003537 ORTHO05D004180 1.2e-20 103.6 96 54.2
ClCG05G016980 Citrullus lanatus HOM05D003537 ORTHO05D004180 1.6e-20 103.2 116 52.6
FvH4_2g29200 Fragaria vesca HOM05D003537 ORTHO05D004180 1.6e-20 103.2 115 58.3
Glyma.06G069100 Glycine max HOM05D003537 ORTHO05D004180 1.6e-20 103.2 104 65.4
CsaV3_2G002870 Cucumis sativus L. HOM05D003537 ORTHO05D004180 2.0e-20 102.8 100 53.0
FAN15G0527 Fragaria x ananassa HOM05D003537 ORTHO05D004180 2.0e-20 102.8 115 58.3
FAN27G1347 Fragaria x ananassa HOM05D003537 ORTHO05D004180 2.0e-20 102.8 115 58.3
Medtr3g107397 Medicago truncatula HOM05D003537 ORTHO05D004180 2.0e-20 102.8 96 59.4
Glyma.04G147800 Glycine max HOM05D003537 ORTHO05D004180 2.7e-20 102.4 82 72.0
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 2.7e-20 102.4 84 73.8
Cpa.g.sc75.27 Carica papaya HOM05D003537 ORTHO05D004180 3.5e-20 102.1 102 51.0
Nn8g39452 Nelumbo nucifera HOM05D003537 ORTHO05D004180 4.5e-20 101.7 103 62.1
Cfa003377 Carpinus fangiana HOM05D003537 ORTHO05D004180 5.9e-20 101.3 102 63.7
Atru.BG.3.p Acer truncatum HOM05D003537 ORTHO05D004180 7.7e-20 100.9 68 69.1
MSTRG.21979 Avicennia marina HOM05D003537 ORTHO05D004180 1.0e-19 100.5 82 56.1
HanXRQChr16g0505371 Helianthus annuus HOM05D003537 ORTHO05D004180 1.0e-19 100.5 81 58.0
Haze_25576 Corylus avellana HOM05D003537 ORTHO05D004180 1.3e-19 100.1 102 50.0
Glyma.17G114800 Glycine max HOM05D003537 ORTHO05D004180 1.3e-19 100.1 99 49.5
Lj1g0012711 Lotus japonicus HOM05D003537 ORTHO05D004180 1.7e-19 99.8 82 61.0
Sed0007274 Sechium edule HOM05D003537 ORTHO05D004180 1.7e-19 99.8 114 46.5
Psat0s2233g0360 Pisum sativum HOM05D003537 ORTHO05D004180 2.3e-19 99.4 101 51.5
Sed0005083 Sechium edule HOM05D003537 ORTHO05D004180 2.3e-19 99.4 100 56.0
THA.LOC104808988 Tarenaya hassleriana HOM05D003537 ORTHO05D004180 2.3e-19 99.4 102 57.8
GSVIVG01035845001 Vitis vinifera HOM05D003537 ORTHO05D004180 2.3e-19 99.4 82 76.8
AT3G47650 Arabidopsis thaliana HOM05D003537 ORTHO05D004180 2.9e-19 99.0 83 73.5
BcaB01g00893 Brassica carinata HOM05D003537 ORTHO05D004180 3.8e-19 98.6 83 53.0
Ciclev10009876m.g Citrus clementina HOM05D003537 ORTHO05D004180 3.8e-19 98.6 98 53.1
Thecc.09G126600 Theobroma cacao HOM05D003537 ORTHO05D004180 3.8e-19 98.6 102 52.0
TPR.G3106 Trifolium pratense HOM05D003537 ORTHO05D004180 5.0e-19 98.2 85 64.7
TAR636G0369 Trochodendron aralioides HOM05D003537 ORTHO05D004180 5.0e-19 98.2 102 54.9
ECA246G5170 Erigeron canadensis HOM05D003537 ORTHO05D004180 6.6e-19 97.8 80 56.2
Hma1.2p1_0018F.1_g012400 Hydrangea macrophylla HOM05D003537 ORTHO05D004180 6.6e-19 97.8 125 43.2
Lalb_Chr07g0178961 Lupinus albus HOM05D003537 ORTHO05D004180 6.6e-19 97.8 94 64.9
CSS0014531 Camellia sinensis var. sinensis HOM05D003537 ORTHO05D004180 8.6e-19 97.4 82 56.1
Dinv41510 Davidia involucrata HOM05D003537 ORTHO05D004180 8.6e-19 97.4 102 62.7
RcHm_v2.0_Chr2g0088401 Rosa chinensis HOM05D003537 ORTHO05D004180 8.6e-19 97.4 102 58.8
TAR625G0117 Trochodendron aralioides HOM05D003537 ORTHO05D004180 8.6e-19 97.4 102 56.9
Dinv15950 Davidia involucrata HOM05D003537 ORTHO05D004180 1.1e-18 97.1 80 71.2
FvH4_1g03260 Fragaria vesca HOM05D003537 ORTHO05D004180 1.1e-18 97.1 136 52.2
FAN19G1671 Fragaria x ananassa HOM05D003537 ORTHO05D004180 1.1e-18 97.1 136 52.2
PGR044G0105 Punica granatum HOM05D003537 ORTHO05D004180 1.5e-18 96.7 84 70.2
Oeu018469.1 Olea europaea HOM05D003537 ORTHO05D004180 1.9e-18 96.3 84 69.0
THA.LOC104815279 Tarenaya hassleriana HOM05D003537 ORTHO05D004180 2.5e-18 95.9 104 62.5
FAN28G2448 Fragaria x ananassa HOM05D003537 ORTHO05D004180 4.2e-18 95.1 137 50.4
GSVIVG01015532001 Vitis vinifera HOM05D003537 ORTHO05D004180 4.2e-18 95.1 84 54.8
A06p19950 Brassica napus HOM05D003537 ORTHO05D004180 5.5e-18 94.7 83 67.5
BraA06t25078Z Brassica rapa HOM05D003537 ORTHO05D004180 5.5e-18 94.7 83 67.5
AUR62011130 Chenopodium quinoa HOM05D003537 ORTHO05D004180 5.5e-18 94.7 93 67.7
AUR62013357 Chenopodium quinoa HOM05D003537 ORTHO05D004180 5.5e-18 94.7 80 72.5
Gohir.A06G143050 Gossypium hirsutum HOM05D003537 ORTHO05D004180 5.5e-18 94.7 80 55.0
TWI63G0509 Tripterygium wilfordii HOM05D003537 ORTHO05D004180 5.5e-18 94.7 113 52.2
unitig_26.g9662 Utricularia gibba HOM05D003537 ORTHO05D004180 5.5e-18 94.7 84 53.6
Medtr4g114180 Medicago truncatula HOM05D003537 ORTHO05D004180 7.2e-18 94.4 95 53.7
Rhsim01G0071100 Rhododendron simsii HOM05D003537 ORTHO05D004180 7.2e-18 94.4 131 49.6
Lsat_1_v5_gn_8_58621 Lactuca sativa HOM05D003537 ORTHO05D004180 9.5e-18 94.0 77 54.5
SGA_v2.0_scaffold17G08031 Striga asiatica HOM05D003537 ORTHO05D004180 9.5e-18 94.0 100 50.0
BcaC01g01786 Brassica carinata HOM05D003537 ORTHO05D004180 1.2e-17 93.6 83 67.5
Glyma.13G167200 Glycine max HOM05D003537 ORTHO05D004180 1.2e-17 93.6 130 39.2
A01p25800 Brassica napus HOM05D003537 ORTHO05D004180 1.6e-17 93.2 82 67.1
BraA01t02496Z Brassica rapa HOM05D003537 ORTHO05D004180 1.6e-17 93.2 82 67.1
FAN23G0028 Fragaria x ananassa HOM05D003537 ORTHO05D004180 1.6e-17 93.2 134 42.5
Pp3c18_21980 Physcomitrium patens HOM05D003537 ORTHO05D004180 1.6e-17 93.2 93 49.5
Migut.K00478 Erythranthe guttata HOM05D003537 ORTHO05D004180 2.1e-17 92.8 82 53.7
A06p27250 Brassica napus HOM05D003537 ORTHO05D004180 2.8e-17 92.4 82 67.1
Sp5g14270 Schrenkiella parvula HOM05D003537 ORTHO05D004180 2.8e-17 92.4 113 53.1
ECA240G1743 Erigeron canadensis HOM05D003537 ORTHO05D004180 4.7e-17 91.7 132 46.2
Migut.K00479 Erythranthe guttata HOM05D003537 ORTHO05D004180 6.1e-17 91.3 82 50.0
RhsimUnG0194700 Rhododendron simsii HOM05D003537 ORTHO05D004180 6.1e-17 91.3 103 57.3
CDE06G2093 Ceratophyllum demersum HOM05D003537 ORTHO05D004180 8.0e-17 90.9 113 54.0
Cc08_g00790 Coffea canephora HOM05D003537 ORTHO05D004180 1.0e-16 90.5 89 50.6
EL10Ac8g18657 Beta vulgaris HOM05D003537 ORTHO05D004180 1.8e-16 89.7 105 46.7
Mapoly0035s0118 Marchantia polymorpha HOM05D002896 ORTHO05D003263 1.8e-16 89.7 87 58.6
CANSAT11G2285 Cannabis sativa HOM05D003537 ORTHO05D004180 2.3e-16 89.4 106 45.3
Duzib168G0240 Durio zibethinus HOM05D003537 ORTHO05D004180 2.3e-16 89.4 82 53.7
CDE04G0424 Ceratophyllum demersum HOM05D003537 ORTHO05D004180 3.0e-16 89.0 112 55.4
Glyma.06G222000 Glycine max HOM05D003537 ORTHO05D004180 3.0e-16 89.0 97 59.8
Gohir.D06G099500 Gossypium hirsutum HOM05D003537 ORTHO05D004180 3.0e-16 89.0 107 46.7
Peaxi162Scf00256g00035 Petunia axillaris HOM05D003537 ORTHO05D004180 5.2e-16 88.2 107 43.9
Prupe.7G243100 Prunus persica HOM05D003537 ORTHO05D004180 6.8e-16 87.8 102 58.8
Aa31LG8G16720 Aethionema arabicum HOM05D003537 ORTHO05D004180 1.2e-15 87.0 82 52.4
Ah.14g079820 Amaranthus hybridus HOM05D003537 ORTHO05D004180 1.5e-15 86.7 133 39.1
FAN24G0346 Fragaria x ananassa HOM05D003537 ORTHO05D004180 1.5e-15 86.7 91 49.5
ATR1120G202 Amborella trichopoda HOM05D003537 ORTHO05D004180 2.6e-15 85.9 77 53.2
Ca_21681_v3 Cicer arietinum L. HOM05D003537 ORTHO05D004180 2.6e-15 85.9 94 46.8
Aqoxy7G02181 Aquilegia oxysepala HOM05D003537 ORTHO05D004180 4.4e-15 85.1 83 68.7
MBI01_g36269_MAGBIO Magnolia biondii HOM05D003537 ORTHO05D004180 5.7e-15 84.7 80 67.5
Phvul.003G164500 Phaseolus vulgaris HOM05D003537 ORTHO05D004180 7.5e-15 84.3 101 55.4
vmacro20557 Vaccinium macrocarpon HOM05D003537 ORTHO05D004180 1.3e-14 83.6 116 51.7
Hund09242 Selenicereus undatus HOM05D003537 ORTHO05D004180 1.7e-14 83.2 85 62.4
vmacro23102 Vaccinium macrocarpon HOM05D003537 ORTHO05D004180 1.7e-14 83.2 85 63.5
Lj4g0026965 Lotus japonicus HOM05D003537 ORTHO05D004180 2.2e-14 82.8 98 46.9
Thhalv10010812m.g Eutrema salsugineum HOM05D003537 ORTHO05D004180 2.8e-14 82.4 97 56.7
MD02G1031600 Malus domestica HOM05D003537 ORTHO05D004180 6.3e-14 81.3 102 42.2
PSO455G0045 Papaver somniferum HOM05D003537 ORTHO05D004180 1.4e-13 80.1 99 45.5
Lsat_1_v5_gn_5_30800 Lactuca sativa HOM05D003537 ORTHO05D004180 1.8e-13 79.7 59 61.0
DCAR_003091 Daucus carota HOM05D003537 ORTHO05D004180 2.4e-13 79.3 58 62.1
Lalb_Chr13g0301861 Lupinus albus HOM05D003537 ORTHO05D004180 2.4e-13 79.3 87 60.9
MD15G1173100 Malus domestica HOM05D003537 ORTHO05D004180 2.4e-13 79.3 100 55.0
Psat4g040120 Pisum sativum HOM05D003537 ORTHO05D004180 2.4e-13 79.3 84 53.6
BolC1t03207H Brassica oleracea HOM05D003537 ORTHO05D004180 3.2e-13 79.0 82 61.0
CARHR156330 Cardamine hirsuta HOM05D003537 ORTHO05D004180 3.2e-13 79.0 82 59.8
SMO145G0190 Selaginella moellendorffii HOM05D003537 ORTHO05D004180 4.1e-13 78.6 69 50.7
VMungo1215G2386 Vigna mungo HOM05D003537 ORTHO05D004180 4.1e-13 78.6 100 55.0
BcaB02g10692 Brassica carinata HOM05D003537 ORTHO05D004180 5.4e-13 78.2 82 61.0
Lsat_1_v5_gn_7_45281 Lactuca sativa HOM05D003537 ORTHO05D004180 7.0e-13 77.8 77 48.1
C03p71880 Brassica napus HOM05D003537 ORTHO05D004180 9.2e-13 77.4 83 60.2
BcaC01g02287 Brassica carinata HOM05D003537 ORTHO05D004180 1.2e-12 77.0 83 49.4
PSO170G5454 Papaver somniferum HOM05D003537 ORTHO05D004180 1.2e-12 77.0 102 43.1
GSVIVG01015534001 Vitis vinifera HOM05D003537 ORTHO05D004180 1.2e-12 77.0 59 61.0
BcaB05g23065 Brassica carinata HOM05D003537 ORTHO05D004180 2.0e-12 76.3 82 59.8
BraA06t25666Z Brassica rapa HOM05D003537 ORTHO05D004180 2.0e-12 76.3 82 59.8
Oeu007500.1 Olea europaea HOM05D003537 ORTHO05D004180 2.0e-12 76.3 84 61.9
BcaC09g49812 Brassica carinata HOM05D003537 ORTHO05D004180 1.0e-11 73.9 82 58.5
C01p32690 Brassica napus HOM05D003537 ORTHO05D004180 1.0e-11 73.9 82 58.5
TPR.G10724 Trifolium pratense HOM05D003537 ORTHO05D004180 1.0e-11 73.9 69 50.7
Carub.0005s1378 Capsella rubella HOM05D003537 ORTHO05D004180 1.7e-11 73.2 97 53.6
Os06g0332800 Oryza sativa ssp. japonica HOM05D003537 ORTHO05D004180 1.1e-10 70.5 86 57.0
SEGI_36836 Sequoiadendron giganteum HOM05D003537 ORTHO05D004180 1.5e-10 70.1 83 45.8
SalBow1G5494 Salvia bowleyana HOM05D003537 ORTHO05D004180 4.3e-10 68.6 45 62.2
MELO3C004506.2 Cucumis melo HOM05D003537 ORTHO05D004180 9.5e-10 67.4 123 36.6
FAN26G0344 Fragaria x ananassa HOM05D003537 ORTHO05D004180 2.8e-09 65.9 55 52.7
MELO3C030460.2 Cucumis melo HOM05D003537 ORTHO05D004180 6.1e-09 64.7 62 54.8
HanXRQChr09g0242821 Helianthus annuus HOM05D003537 ORTHO05D004180 1.4e-08 63.5 133 42.1
Gohir.D08G087900 Gossypium hirsutum HOM05D003537 ORTHO05D004180 6.8e-08 61.2 59 52.5
CSS0006865 Camellia sinensis var. sinensis HOM05D003537 ORTHO05D004180 1.5e-07 60.1 32 75.0
CSS0026750 Camellia sinensis var. sinensis HOM05D003537 ORTHO05D004180 1.5e-07 60.1 32 75.0
Gohir.A10G061300 Gossypium hirsutum HOM05D003537 ORTHO05D004180 7.5e-07 57.8 32 75.0
MCO09G833 Micromonas commoda HOM05D001438 ORTHO05D001336 4.9e-06 55.1 39 53.8


User provided reference genes

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