Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0021000 Salix brachista HOM05D004800 ORTHO05D005842 1.8e-111 406.0 215 100.0
Potri.006G264700 Populus trichocarpa HOM05D004800 ORTHO05D005842 3.7e-88 328.6 217 83.9
Sabra06G0206800 Salix brachista HOM05D004800 ORTHO05D005842 7.0e-87 324.3 207 83.1
Dinv08182 Davidia involucrata HOM05D004800 ORTHO05D005842 9.4e-68 260.8 210 66.2
COL.COLO4_18955 Corchorus olitorius HOM05D004800 ORTHO05D005842 2.7e-67 259.2 206 67.0
Gorai.009G063300 Gossypium raimondii HOM05D004800 ORTHO05D005842 4.0e-66 255.4 209 65.1
Gohir.D05G062200 Gossypium hirsutum HOM05D004800 ORTHO05D005842 1.2e-65 253.8 209 64.6
Thecc.09G015200 Theobroma cacao HOM05D004800 ORTHO05D005842 2.0e-65 253.1 215 66.0
Dinv13413 Davidia involucrata HOM05D004800 ORTHO05D005842 5.7e-65 251.5 205 66.3
Manes.16G130200 Manihot esculenta HOM05D004800 ORTHO05D005842 1.7e-64 250.0 211 64.0
Duzib168G1619 Durio zibethinus HOM05D004800 ORTHO05D005842 2.8e-64 249.2 204 64.2
Gohir.A05G060000 Gossypium hirsutum HOM05D004800 ORTHO05D005842 2.8e-64 249.2 209 64.1
vmacro05151 Vaccinium macrocarpon HOM05D004800 ORTHO05D005842 8.3e-64 247.7 201 64.7
Manes.03G008100 Manihot esculenta HOM05D004800 ORTHO05D005842 1.1e-63 247.3 212 63.2
Rhsim07G0165700 Rhododendron simsii HOM05D004800 ORTHO05D005842 1.4e-63 246.9 202 64.4
Ciclev10009140m.g Citrus clementina HOM05D004800 ORTHO05D005842 1.8e-63 246.5 214 59.3
Cfa013047 Carpinus fangiana HOM05D004800 ORTHO05D005842 2.4e-63 246.1 202 64.9
TAR625G0162 Trochodendron aralioides HOM05D004800 ORTHO05D005842 9.2e-63 244.2 203 64.0
Haze_21408 Corylus avellana HOM05D004800 ORTHO05D005842 2.7e-62 242.7 202 64.4
CSS0020729 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 4.5e-62 241.9 201 64.2
CSS0041988 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 4.5e-62 241.9 201 64.2
TAR625G0311 Trochodendron aralioides HOM05D004800 ORTHO05D005842 7.7e-62 241.1 203 63.5
Hma1.2p1_0389F.1_g142470 Hydrangea macrophylla HOM05D004800 ORTHO05D005842 1.1e-60 237.3 209 60.3
DCAR_022862 Daucus carota HOM05D004800 ORTHO05D005842 5.6e-60 235.0 202 61.9
Atru.chr7.2559 Acer truncatum HOM05D004800 ORTHO05D005842 7.3e-60 234.6 209 59.3
Cpa.g.sc148.17 Carica papaya HOM05D004800 ORTHO05D005842 1.6e-59 233.4 206 62.6
TWI34G0615 Tripterygium wilfordii HOM05D004800 ORTHO05D005842 4.7e-59 231.9 208 59.6
CiPaw.08G005800 Carya illinoinensis HOM05D004800 ORTHO05D005842 6.1e-59 231.5 204 59.8
Prupe.1G394400 Prunus persica HOM05D004800 ORTHO05D005842 6.1e-59 231.5 215 58.1
Lj7A735T34 Lonicera japonica HOM05D004800 ORTHO05D005842 1.8e-58 229.9 201 59.2
Phvul.009G086600 Phaseolus vulgaris HOM05D004800 ORTHO05D005842 1.2e-57 227.3 211 57.3
MSTRG.25830 Avicennia marina HOM05D004800 ORTHO05D005842 1.5e-57 226.9 207 58.9
Lj1g0022737 Lotus japonicus HOM05D004800 ORTHO05D005842 2.6e-57 226.1 214 57.0
Sed0002840 Sechium edule HOM05D004800 ORTHO05D005842 3.4e-57 225.7 201 58.2
Psat5g033480 Pisum sativum HOM05D004800 ORTHO05D005842 5.7e-57 224.9 210 56.7
Actinidia23108 Actinidia chinensis HOM05D004800 ORTHO05D005842 7.5e-57 224.6 209 59.3
CSS0021373 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 7.5e-57 224.6 181 65.7
Potri.018G018100 Populus trichocarpa HOM05D004800 ORTHO05D005842 7.5e-57 224.6 134 87.3
Actinidia14132 Actinidia chinensis HOM05D004800 ORTHO05D005842 9.8e-57 224.2 208 61.5
TWI32G1317 Tripterygium wilfordii HOM05D004800 ORTHO05D005842 9.8e-57 224.2 206 59.2
Sc09g0010680 Simmondsia chinensis HOM05D004800 ORTHO05D005842 2.2e-56 223.0 196 60.2
CANSAT25G3039 Cannabis sativa HOM05D004800 ORTHO05D005842 6.4e-56 221.5 195 60.5
Nitab4.5_0010613g0010 Nicotiana tabacum HOM05D004800 ORTHO05D005842 6.4e-56 221.5 227 55.1
VMungo1309G1055 Vigna mungo HOM05D004800 ORTHO05D005842 6.4e-56 221.5 211 56.9
TPR.G1887 Trifolium pratense HOM05D004800 ORTHO05D005842 1.4e-55 220.3 206 55.8
GSVIVG01035974001 Vitis vinifera HOM05D004800 ORTHO05D005842 1.8e-55 219.9 184 64.1
THA.LOC104814986 Tarenaya hassleriana HOM05D004800 ORTHO05D005842 5.4e-55 218.4 208 55.3
CAN.G333.3 Capsicum annuum HOM05D004800 ORTHO05D005842 3.5e-54 215.7 213 57.3
FAN20G2958 Fragaria x ananassa HOM05D004800 ORTHO05D005842 3.5e-54 215.7 214 55.1
FAN27G0477 Fragaria x ananassa HOM05D004800 ORTHO05D005842 3.5e-54 215.7 214 55.1
Sp2g22450 Schrenkiella parvula HOM05D004800 ORTHO05D005842 1.3e-53 213.8 208 54.3
Medtr3g105925 Medicago truncatula HOM05D004800 ORTHO05D005842 1.7e-53 213.4 210 55.2
Eucgr.L02918 Eucalyptus grandis HOM05D004800 ORTHO05D005842 2.3e-53 213.0 210 55.7
Oeu001621.3 Olea europaea HOM05D004800 ORTHO05D005842 2.3e-53 213.0 208 54.3
Cc08_g07200 Coffea canephora HOM05D004800 ORTHO05D005842 3.9e-53 212.2 203 57.6
Migut.A00358 Erythranthe guttata HOM05D004800 ORTHO05D005842 5.0e-53 211.8 211 54.5
RcHm_v2.0_Chr6g0299361 Rosa chinensis HOM05D004800 ORTHO05D005842 5.0e-53 211.8 200 55.5
Solyc07g008750.4 Solanum lycopersicum HOM05D004800 ORTHO05D005842 5.0e-53 211.8 212 54.7
HanXRQChr13g0411011 Helianthus annuus HOM05D004800 ORTHO05D005842 6.6e-53 211.5 201 57.2
PGSC0003DMG401028727 Solanum tuberosum HOM05D004800 ORTHO05D005842 6.6e-53 211.5 213 54.9
Eucgr.C02606 Eucalyptus grandis HOM05D004800 ORTHO05D005842 1.5e-52 210.3 210 55.2
Ca_15781_v3 Cicer arietinum L. HOM05D004800 ORTHO05D005842 1.9e-52 209.9 208 56.2
FvH4_2g41170 Fragaria vesca HOM05D004800 ORTHO05D005842 4.3e-52 208.8 203 54.7
QL02p018802 Quercus lobata HOM05D004800 ORTHO05D005842 4.3e-52 208.8 192 58.3
Sopen07g004690 Solanum pennellii HOM05D004800 ORTHO05D005842 7.3e-52 208.0 206 55.3
A06p35840 Brassica napus HOM05D004800 ORTHO05D005842 2.1e-51 206.5 201 54.7
BraA06t26509Z Brassica rapa HOM05D004800 ORTHO05D005842 2.1e-51 206.5 201 54.7
Lsat_1_v5_gn_5_49760 Lactuca sativa HOM05D004800 ORTHO05D005842 2.1e-51 206.5 201 56.7
BcaNung02298 Brassica carinata HOM05D004800 ORTHO05D005842 4.7e-51 205.3 202 54.5
CsaV3_4G036490 Cucumis sativus L. HOM05D004800 ORTHO05D005842 4.7e-51 205.3 192 56.8
Oeu009650.1 Olea europaea HOM05D004800 ORTHO05D005842 8.0e-51 204.5 208 52.9
AT5G25080 Arabidopsis thaliana HOM05D004800 ORTHO05D005842 1.8e-50 203.4 204 52.9
MELO3C016954.2 Cucumis melo HOM05D004800 ORTHO05D005842 3.1e-50 202.6 201 54.2
Lalb_Chr11g0063501 Lupinus albus HOM05D004800 ORTHO05D005842 3.1e-50 202.6 171 64.3
SGA_v2.0_scaffold147G36341 Striga asiatica HOM05D004800 ORTHO05D005842 3.1e-50 202.6 206 53.4
BcaNung03198 Brassica carinata HOM05D004800 ORTHO05D005842 4.0e-50 202.2 209 53.6
ClCG05G016220 Citrullus lanatus HOM05D004800 ORTHO05D005842 4.0e-50 202.2 201 54.7
Hund02986 Selenicereus undatus HOM05D004800 ORTHO05D005842 5.2e-50 201.8 207 54.1
SalBow4G3208 Salvia bowleyana HOM05D004800 ORTHO05D005842 6.8e-50 201.4 212 53.3
Aqoxy7G03382 Aquilegia oxysepala HOM05D004800 ORTHO05D005842 2.0e-49 199.9 208 57.2
AUR62024801 Chenopodium quinoa HOM05D004800 ORTHO05D005842 2.6e-49 199.5 210 53.3
AUR62032420 Chenopodium quinoa HOM05D004800 ORTHO05D005842 3.4e-49 199.1 210 52.9
Peaxi162Scf00006g00249 Petunia axillaris HOM05D004800 ORTHO05D005842 5.8e-49 198.4 209 52.2
PSO384G2235 Papaver somniferum HOM05D004800 ORTHO05D005842 7.5e-49 198.0 202 52.5
BolC7t44804H Brassica oleracea HOM05D004800 ORTHO05D005842 9.8e-49 197.6 221 49.8
PSO339G1021 Papaver somniferum HOM05D004800 ORTHO05D005842 1.3e-48 197.2 202 52.5
PGR044G1902 Punica granatum HOM05D004800 ORTHO05D005842 1.7e-48 196.8 209 52.2
C07p42740 Brassica napus HOM05D004800 ORTHO05D005842 2.9e-48 196.1 221 49.3
EL10Ac2g02494 Beta vulgaris HOM05D004800 ORTHO05D005842 3.7e-48 195.7 211 53.1
MD08G1055900 Malus domestica HOM05D004800 ORTHO05D005842 1.4e-47 193.7 210 51.4
BcaC04g23570 Brassica carinata HOM05D004800 ORTHO05D005842 9.2e-47 191.0 209 51.7
C09p07000 Brassica napus HOM05D004800 ORTHO05D005842 9.2e-47 191.0 209 51.7
BcaNung06718 Brassica carinata HOM05D004800 ORTHO05D005842 4.6e-46 188.7 189 54.0
AL6G36710 Arabidopsis lyrata HOM05D004800 ORTHO05D005842 6.0e-46 188.3 204 50.5
Thhalv10004902m.g Eutrema salsugineum HOM05D004800 ORTHO05D005842 1.3e-45 187.2 213 51.2
Glyma.06G061100 Glycine max HOM05D004800 ORTHO05D005842 1.7e-45 186.8 211 50.7
BraA09t36276Z Brassica rapa HOM05D004800 ORTHO05D005842 5.0e-45 185.3 209 50.7
ATR0580G220 Amborella trichopoda HOM05D004800 ORTHO05D005842 8.6e-45 184.5 205 50.7
Carub.0006s2291 Capsella rubella HOM05D004800 ORTHO05D005842 1.1e-44 184.1 201 50.2
A09p06310 Brassica napus HOM05D004800 ORTHO05D005842 1.5e-44 183.7 209 50.2
CANSAT35G0701 Cannabis sativa HOM05D004800 ORTHO05D005842 2.5e-44 183.0 211 49.8
unitig_749.g13819 Utricularia gibba HOM05D004800 ORTHO05D005842 5.6e-44 181.8 203 49.8
BolC9t53616H Brassica oleracea HOM05D004800 ORTHO05D005842 1.2e-43 180.6 208 49.5
Aa31LG11G4300 Aethionema arabicum HOM05D004800 ORTHO05D005842 1.6e-43 180.3 202 47.0
arahy.Tifrunner.gnm1.ann1.D8NHAG Arachis hypogaea HOM05D004800 ORTHO05D005842 6.2e-43 178.3 209 49.8
SHI21074 Sapria himalayana HOM05D004800 ORTHO05D005842 6.2e-43 178.3 231 49.4
CDE02G3876 Ceratophyllum demersum HOM05D004800 ORTHO05D005842 2.6e-41 172.9 201 50.7
CARHR188420 Cardamine hirsuta HOM05D004800 ORTHO05D005842 2.9e-40 169.5 212 45.8
HPP92_017174 Vanilla planifolia HOM05D004800 ORTHO05D005842 4.9e-40 168.7 202 47.0
ECA240G1139 Erigeron canadensis HOM05D004800 ORTHO05D005842 5.4e-39 165.2 140 61.4
arahy.Tifrunner.gnm1.ann1.1BAV2G Arachis hypogaea HOM05D004800 ORTHO05D005842 1.6e-38 163.7 209 46.4
Nn2g12411 Nelumbo nucifera HOM05D004800 ORTHO05D005842 2.1e-38 163.3 130 63.1
Peaxi162Scf01038g00137 Petunia axillaris HOM05D004800 ORTHO05D005842 3.3e-36 156.0 124 65.3
BcaB04g19808 Brassica carinata HOM05D004800 ORTHO05D005842 5.6e-36 155.2 205 47.8
Os08g0270200 Oryza sativa ssp. japonica HOM05D004800 ORTHO05D005842 6.2e-35 151.8 210 43.8
Zm00001eb177850 Zea mays HOM05D004800 ORTHO05D005842 8.1e-35 151.4 210 44.3
MBI14_g09103_MAGBIO Magnolia biondii HOM05D004800 ORTHO05D005842 1.1e-31 141.0 208 44.2
unitig_26.g9784 Utricularia gibba HOM05D004800 ORTHO05D005842 1.7e-29 133.7 205 43.9
arahy.Tifrunner.gnm1.ann1.CUZL6Q Arachis hypogaea HOM05D004800 ORTHO05D005842 2.5e-28 129.8 209 39.7
arahy.Tifrunner.gnm1.ann1.N4WP0Z Arachis hypogaea HOM05D004800 ORTHO05D005842 2.5e-28 129.8 209 39.7
arahy.Tifrunner.gnm1.ann1.D9UBCD Arachis hypogaea HOM05D004800 ORTHO05D005842 4.3e-28 129.0 209 39.2
arahy.Tifrunner.gnm1.ann1.YE5PM3 Arachis hypogaea HOM05D004800 ORTHO05D005842 1.2e-27 127.5 209 39.2
Lj5g0013304 Lotus japonicus HOM05D004800 ORTHO05D005842 2.8e-27 126.3 202 40.6
Phvul.001G041300 Phaseolus vulgaris HOM05D004800 ORTHO05D005842 3.4e-25 119.4 202 37.6
VMungo0647G1387 Vigna mungo HOM05D004800 ORTHO05D005842 5.4e-23 112.1 205 38.0
Glyma.14G101700 Glycine max HOM05D004800 ORTHO05D005842 9.3e-23 111.3 202 37.1
Nitab4.5_0000617g0080 Nicotiana tabacum HOM05D004800 ORTHO05D005842 1.5e-20 104.0 90 60.0
TPR.G38911 Trifolium pratense HOM05D004800 ORTHO05D005842 1.5e-20 104.0 204 39.2
Pp3c2_14120 Physcomitrium patens HOM05D004800 ORTHO05D005842 4.8e-19 99.0 176 35.2
Psat6g026000 Pisum sativum HOM05D004800 ORTHO05D005842 8.1e-19 98.2 187 36.9
Mapoly0130s0032 Marchantia polymorpha HOM05D004800 ORTHO05D005842 1.2e-17 94.4 189 30.2
AagrBONN_evm.TU.Sc2ySwM_368.3173 Anthoceros agrestis HOM05D004800 ORTHO05D005842 1.5e-17 94.0 184 34.2
Medtr1g014130 Medicago truncatula HOM05D004800 ORTHO05D005842 3.4e-17 92.8 185 36.8
SMO140G0030 Selaginella moellendorffii HOM05D004800 ORTHO05D005842 1.1e-15 87.8 188 33.0
Sopen01g020190 Solanum pennellii HOM05D004800 ORTHO05D005842 3.5e-14 82.8 74 59.5
Sopen01g040360 Solanum pennellii HOM05D004800 ORTHO05D005842 3.9e-13 79.3 74 56.8
Sopen07g026310 Solanum pennellii HOM05D004800 ORTHO05D005842 3.9e-13 79.3 74 56.8
Sopen11g020420 Solanum pennellii HOM05D004800 ORTHO05D010331 3.3e-12 76.3 60 66.7
Sopen07g029020 Solanum pennellii HOM05D004800 ORTHO05D005842 1.3e-11 74.3 60 63.3
SEGI_18119 Sequoiadendron giganteum HOM05D004800 ORTHO05D005842 2.8e-11 73.2 103 39.8
Sed0015580 Sechium edule HOM05D004800 ORTHO05D005842 4.0e-10 69.3 62 51.6
Zm00001eb353150 Zea mays HOM05D004800 ORTHO05D005842 1.5e-09 67.4 127 37.0
CBR_g8579 Chara braunii HOM05D004800 ORTHO05D005842 9.9e-09 64.7 135 29.6
Lalb_Chr24g0401961 Lupinus albus HOM05D004800 ORTHO05D005842 1.7e-08 63.9 98 38.8
arahy.Tifrunner.gnm1.ann1.Y76JQK Arachis hypogaea HOM05D004800 ORTHO05D005842 4.2e-07 59.3 199 26.1
TPR.G28957 Trifolium pratense HOM05D000201 ORTHO05D000421 9.3e-07 58.2 56 46.4


User provided reference genes

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