Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0010100 Salix brachista HOM05D000880 ORTHO05D009684 1.2e-199 700.7 716 100.0
Sabra18G0001200 Salix brachista HOM05D000880 ORTHO05D009684 2.6e-154 550.1 674 96.9
Potri.018G004400 Populus trichocarpa HOM05D000880 ORTHO05D009684 4.1e-107 393.3 301 92.7
Manes.07G088100 Manihot esculenta HOM05D000880 ORTHO05D009684 1.9e-43 181.8 304 59.5
Atru.chr7.2671 Acer truncatum HOM05D000880 ORTHO05D009684 8.6e-41 172.9 308 57.8
Cfa013251 Carpinus fangiana HOM05D000880 ORTHO05D008158 1.2e-39 169.1 313 57.2
Prupe.1G462500 Prunus persica HOM05D000880 ORTHO05D009684 3.6e-39 167.5 318 57.2
MD08G1133900 Malus domestica HOM05D000880 ORTHO05D009684 4.7e-39 167.2 315 57.1
Cpa.g.sc10.206 Carica papaya HOM05D000880 ORTHO05D009684 6.2e-39 166.8 304 59.9
QL12p024656 Quercus lobata HOM05D000880 ORTHO05D009684 6.2e-39 166.8 313 58.1
Dinv15656 Davidia involucrata HOM05D000880 ORTHO05D009684 3.8e-36 157.5 300 59.0
CiPaw.07G214800 Carya illinoinensis HOM05D000880 ORTHO05D009684 1.9e-35 155.2 319 55.5
CANSAT78G1387 Cannabis sativa HOM05D000880 ORTHO05D009684 5.4e-35 153.7 306 58.2
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 9.2e-35 152.9 297 57.2
Ciclev10007859m.g Citrus clementina HOM05D000880 ORTHO05D009684 7.8e-34 149.8 303 59.7
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 1.7e-33 148.7 313 54.0
PGR044G0315 Punica granatum HOM05D000880 ORTHO05D009684 3.3e-32 144.4 304 56.2
arahy.Tifrunner.gnm1.ann1.CHY0RW Arachis hypogaea HOM05D000880 ORTHO05D009684 4.3e-32 144.1 313 53.7
MELO3C011202.2 Cucumis melo HOM05D000880 ORTHO05D009684 5.6e-32 143.7 297 56.6
Lalb_Chr03g0032741 Lupinus albus HOM05D000880 ORTHO05D009684 7.3e-32 143.3 307 55.4
CsaV3_2G031530 Cucumis sativus L. HOM05D000880 ORTHO05D009684 3.6e-31 141.0 246 63.4
Actinidia06447 Actinidia chinensis HOM05D000880 ORTHO05D009684 9.0e-30 136.3 282 58.2
Thecc.09G004700 Theobroma cacao HOM05D000880 ORTHO05D009684 1.2e-29 136.0 178 46.1
Lj6C69T3 Lonicera japonica HOM05D000880 ORTHO05D009684 2.6e-29 134.8 299 56.2
CSS0007644 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 3.4e-29 134.4 281 58.7
VMungo1127G1257 Vigna mungo HOM05D000880 ORTHO05D009684 4.4e-29 134.0 295 57.3
RcHm_v2.0_Chr6g0312241 Rosa chinensis HOM05D000880 ORTHO05D009684 5.8e-29 133.7 317 52.7
Haze_21694 Corylus avellana HOM05D000880 ORTHO05D009684 9.9e-29 132.9 262 60.7
FAN24G3119 Fragaria x ananassa HOM05D000880 ORTHO05D009684 9.9e-29 132.9 313 53.7
Sed0004667 Sechium edule HOM05D000880 ORTHO05D009684 9.9e-29 132.9 229 60.3
Lj4A910T18 Lonicera japonica HOM05D000880 ORTHO05D009684 1.1e-27 129.4 302 55.3
FAN20G2124 Fragaria x ananassa HOM05D000880 ORTHO05D009684 2.4e-27 128.3 315 52.4
Psat6g031840 Pisum sativum HOM05D000880 ORTHO05D009684 3.2e-27 127.9 308 52.6
TPR.G12115 Trifolium pratense HOM05D000880 ORTHO05D009684 4.2e-27 127.5 309 49.5
Glyma.13G197400 Glycine max HOM05D000880 ORTHO05D009684 9.3e-27 126.3 237 58.6
GSVIVG01003996001 Vitis vinifera HOM05D000880 ORTHO05D009684 1.2e-26 125.9 203 72.9
Phvul.011G207000 Phaseolus vulgaris HOM05D000880 ORTHO05D009684 1.6e-26 125.6 287 57.5
Medtr1g010020 Medicago truncatula HOM05D000880 ORTHO05D009684 2.7e-26 124.8 280 57.1
Ca_12883_v3 Cicer arietinum L. HOM05D000880 ORTHO05D009684 1.0e-25 122.9 244 55.7
Rhsim04G0217100 Rhododendron simsii HOM05D000880 ORTHO05D009684 1.0e-25 122.9 290 55.5
TAR626G1204 Trochodendron aralioides HOM05D000880 ORTHO05D009684 1.3e-25 122.5 278 56.8
Nitab4.5_0000502g0180 Nicotiana tabacum HOM05D000880 ORTHO05D009684 1.5e-24 119.0 299 55.9
Cc08_g06370 Coffea canephora HOM05D000880 ORTHO05D009684 4.3e-24 117.5 289 57.1
Aa31LG10G9610 Aethionema arabicum HOM05D000880 ORTHO05D009684 4.8e-23 114.0 326 45.4
vmacro08195 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 4.8e-23 114.0 295 55.3
Hund04480 Selenicereus undatus HOM05D000880 ORTHO05D009684 1.4e-22 112.5 245 60.8
Nn8g39798 Nelumbo nucifera HOM05D000880 ORTHO05D009684 3.1e-22 111.3 233 60.9
Migut.E01433 Erythranthe guttata HOM05D000880 ORTHO05D009684 4.0e-22 110.9 279 56.3
Lj3g0007027 Lotus japonicus HOM05D000880 ORTHO05D009684 5.3e-22 110.5 319 39.8
SalBow8G2909 Salvia bowleyana HOM05D004918 ORTHO05D005706 5.3e-22 110.5 284 54.2
FvH4_2g30660 Fragaria vesca HOM05D000880 ORTHO05D009684 1.5e-21 109.0 237 62.0
FAN27G3148 Fragaria x ananassa HOM05D000880 ORTHO05D009684 2.0e-21 108.6 235 61.3
CARHR188620 Cardamine hirsuta HOM05D000880 ORTHO05D009684 2.6e-21 108.2 298 53.4
Thhalv10003880m.g Eutrema salsugineum HOM05D000880 ORTHO05D009684 4.5e-21 107.5 298 53.7
A06p35600 Brassica napus HOM05D000880 ORTHO05D009684 9.9e-21 106.3 304 52.3
Eucgr.H00073 Eucalyptus grandis HOM05D000880 ORTHO05D009684 9.9e-21 106.3 313 50.2
Solyc03g120070.4 Solanum lycopersicum HOM05D000880 ORTHO05D009684 1.7e-20 105.5 296 54.4
Haze_10332 Corylus avellana HOM05D000880 ORTHO05D009684 6.4e-20 103.6 198 69.2
C07p42940 Brassica napus HOM05D000880 ORTHO05D009684 1.4e-19 102.4 304 52.0
BraA06t26485Z Brassica rapa HOM05D000880 ORTHO05D009684 1.4e-19 102.4 304 52.3
Sp2g22620 Schrenkiella parvula HOM05D000880 ORTHO05D009684 5.4e-19 100.5 303 52.8
Aa31LG10G9680 Aethionema arabicum HOM05D000880 ORTHO05D009684 9.3e-19 99.8 232 60.3
BolC7t44823H Brassica oleracea HOM05D000880 ORTHO05D009684 9.3e-19 99.8 301 51.8
EL10Ac6g15284 Beta vulgaris HOM05D000880 ORTHO05D009684 3.5e-18 97.8 227 61.7
Carub.0006s2268 Capsella rubella HOM05D000880 ORTHO05D009684 6.0e-18 97.1 168 38.7
Ah.02g121750 Amaranthus hybridus HOM05D000880 ORTHO05D009684 7.9e-18 96.7 231 58.9
PGSC0003DMG400005692 Solanum tuberosum HOM05D000880 ORTHO05D009684 1.0e-17 96.3 296 53.0
MD15G1110300 Malus domestica HOM05D000880 ORTHO05D009684 3.0e-17 94.7 188 68.6
Glyma.15G236000 Glycine max HOM05D000880 ORTHO05D009684 5.1e-17 94.0 204 56.4
Lsat_1_v5_gn_5_33201 Lactuca sativa HOM05D000880 ORTHO05D009684 5.1e-17 94.0 121 45.5
Sopen03g038940 Solanum pennellii HOM05D000880 ORTHO05D009684 5.1e-17 94.0 296 52.4
Sc07g0001710 Simmondsia chinensis HOM05D000880 ORTHO05D009684 6.7e-17 93.6 114 42.1
MSTRG.13951 Avicennia marina HOM05D000880 ORTHO05D009684 8.7e-17 93.2 205 67.8
Peaxi162Scf00288g01016 Petunia axillaris HOM05D000880 ORTHO05D009684 8.7e-17 93.2 295 51.9
Nitab4.5_0001956g0020 Nicotiana tabacum HOM05D000880 ORTHO05D009684 1.9e-16 92.0 231 60.6
SGA_v2.0_scaffold121G33022 Striga asiatica HOM05D000880 ORTHO05D009684 2.5e-16 91.7 290 42.4
vmacro08192 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 3.3e-16 91.3 300 48.0
Oeu040613.1 Olea europaea HOM05D000880 ORTHO05D009684 1.6e-15 89.0 170 34.7
AT5G24830 Arabidopsis thaliana HOM05D000880 ORTHO05D009684 2.8e-15 88.2 298 50.3
Aqoxy5G01876 Aquilegia oxysepala HOM05D000880 ORTHO05D009684 1.1e-14 86.3 297 50.5
AL6G36470 Arabidopsis lyrata HOM05D000880 ORTHO05D009684 1.4e-14 85.9 298 50.3
AUR62017906 Chenopodium quinoa HOM05D000880 ORTHO05D009684 9.0e-14 83.2 225 50.2
AUR62003593 Chenopodium quinoa HOM05D000880 ORTHO05D009684 1.5e-13 82.4 96 44.8
ECA232G0576 Erigeron canadensis HOM05D000880 ORTHO05D009684 2.0e-13 82.0 90 47.8
ECA236G3570 Erigeron canadensis HOM05D000705 ORTHO05D002970 4.5e-13 80.9 87 47.1
MBI13_g01685_MAGBIO Magnolia biondii HOM05D000880 ORTHO05D001950 6.4e-12 77.0 109 38.5
BcaNung01260 Brassica carinata HOM05D000880 ORTHO05D009684 5.5e-11 73.9 170 32.4
HanXRQChr07g0202221 Helianthus annuus HOM05D000880 ORTHO05D009684 5.5e-11 73.9 140 36.4
Cpa.g.sc10.208 Carica papaya HOM05D000880 ORTHO05D009684 2.7e-10 71.6 74 54.1
CiPaw.15G081300 Carya illinoinensis HOM05D000880 ORTHO05D009684 1.3e-09 69.3 85 45.9
PSO017G1147 Papaver somniferum HOM05D000880 ORTHO05D001950 8.7e-09 66.6 123 32.5
HPP92_017364 Vanilla planifolia HOM05D003382 ORTHO05D003930 4.0e-06 57.8 105 32.4


User provided reference genes

Program Settings