Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra17G0122100 Salix brachista HOM05D005822 ORTHO05D007267 2.0e-135 485.7 236 100.0
Sabra15G0032000 Salix brachista HOM05D005822 ORTHO05D007267 8.1e-97 357.5 255 75.7
Gorai.008G215800 Gossypium raimondii HOM05D005822 ORTHO05D007267 1.1e-29 134.4 168 50.0
Potri.001G124900 Populus trichocarpa HOM05D005822 ORTHO05D007267 1.1e-29 134.4 149 56.4
Gohir.D12G200700 Gossypium hirsutum HOM05D005822 ORTHO05D007267 7.3e-29 131.7 200 44.5
Cc02_g04350 Coffea canephora HOM05D005822 ORTHO05D007267 1.6e-28 130.6 175 48.0
Gohir.A12G198100 Gossypium hirsutum HOM05D005822 ORTHO05D007267 2.1e-28 130.2 178 46.6
Migut.F00481 Erythranthe guttata HOM05D005822 ORTHO05D007267 3.6e-28 129.4 149 53.7
Manes.02G134200 Manihot esculenta HOM05D005822 ORTHO05D007267 4.7e-28 129.0 149 53.0
TAR629G1836 Trochodendron aralioides HOM05D005822 ORTHO05D007267 4.7e-28 129.0 152 52.0
CSS0049205 Camellia sinensis var. sinensis HOM05D005822 ORTHO05D007267 6.2e-28 128.6 175 48.0
GSVIVG01018681001 Vitis vinifera HOM05D005822 ORTHO05D007267 6.2e-28 128.6 149 53.0
Nitab4.5_0003490g0080 Nicotiana tabacum HOM05D005822 ORTHO05D007267 8.0e-28 128.3 150 51.3
Sabra03G0075200 Salix brachista HOM05D005822 ORTHO05D007267 8.0e-28 128.3 149 54.4
Sc19g0002050 Simmondsia chinensis HOM05D005822 ORTHO05D007267 1.0e-27 127.9 149 52.3
Actinidia13579 Actinidia chinensis HOM05D005822 ORTHO05D007267 1.4e-27 127.5 149 52.3
Dinv28582 Davidia involucrata HOM05D005822 ORTHO05D007267 1.4e-27 127.5 149 52.3
MBI12_g29751_MAGBIO Magnolia biondii HOM05D005822 ORTHO05D007267 3.1e-27 126.3 169 49.1
Peaxi162Scf00241g00035 Petunia axillaris HOM05D005822 ORTHO05D007267 3.1e-27 126.3 150 50.7
Sed0004127 Sechium edule HOM05D005822 ORTHO05D007267 3.1e-27 126.3 151 51.0
FAN03G1300 Fragaria x ananassa HOM05D005822 ORTHO05D007267 4.0e-27 125.9 149 51.0
FAN06G5026 Fragaria x ananassa HOM05D005822 ORTHO05D007267 4.0e-27 125.9 149 51.0
Glyma.12G012400 Glycine max HOM05D005822 ORTHO05D007267 4.0e-27 125.9 185 45.9
Lj3g0012047 Lotus japonicus HOM05D005822 ORTHO05D007267 4.0e-27 125.9 149 51.7
Oeu022478.1 Olea europaea HOM05D005822 ORTHO05D007267 4.0e-27 125.9 149 51.0
TWI14G0278 Tripterygium wilfordii HOM05D005822 ORTHO05D007267 4.0e-27 125.9 149 51.7
arahy.Tifrunner.gnm1.ann1.47454T Arachis hypogaea HOM05D005822 ORTHO05D007267 5.2e-27 125.6 162 48.1
CSS0032435 Camellia sinensis var. sinensis HOM05D005822 ORTHO05D007267 6.8e-27 125.2 149 51.7
Nn1g00973 Nelumbo nucifera HOM05D005822 ORTHO05D007267 6.8e-27 125.2 152 52.0
SGA_v2.0_scaffold44G16550 Striga asiatica HOM05D005822 ORTHO05D007267 6.8e-27 125.2 150 50.7
MSTRG.8827 Avicennia marina HOM05D005822 ORTHO05D007267 8.9e-27 124.8 149 51.0
Eucgr.A02894 Eucalyptus grandis HOM05D005822 ORTHO05D007267 8.9e-27 124.8 177 45.8
QL09p005687 Quercus lobata HOM05D005822 ORTHO05D007267 8.9e-27 124.8 158 52.5
Cpa.g.sc3.330 Carica papaya HOM05D005822 ORTHO05D007267 1.2e-26 124.4 149 51.7
Duzib205G0525 Durio zibethinus HOM05D005822 ORTHO05D007267 1.2e-26 124.4 183 46.4
RcHm_v2.0_Chr1g0374211 Rosa chinensis HOM05D005822 ORTHO05D007267 2.0e-26 123.6 149 50.3
Glyma.09G224600 Glycine max HOM05D005822 ORTHO05D007267 2.6e-26 123.2 187 44.9
Hund04595 Selenicereus undatus HOM05D005822 ORTHO05D007267 2.6e-26 123.2 163 48.5
Aqoxy5G03861 Aquilegia oxysepala HOM05D005822 ORTHO05D007267 3.4e-26 122.9 149 50.3
ECA232G0361 Erigeron canadensis HOM05D005822 ORTHO05D007267 3.4e-26 122.9 148 50.7
Solyc03g093240.4 Solanum lycopersicum HOM05D005822 ORTHO05D007267 3.4e-26 122.9 150 50.0
Phvul.011G015300 Phaseolus vulgaris HOM05D005822 ORTHO05D007267 4.4e-26 122.5 149 50.3
ClCG01G004960 Citrullus lanatus HOM05D005822 ORTHO05D007267 5.8e-26 122.1 148 50.7
Thecc.03G154900 Theobroma cacao HOM05D005822 ORTHO05D007267 5.8e-26 122.1 145 53.1
Prupe.2G276500 Prunus persica HOM05D005822 ORTHO05D007267 7.5e-26 121.7 149 50.3
Sopen03g024040 Solanum pennellii HOM05D005822 ORTHO05D007267 7.5e-26 121.7 150 50.0
Ah.03g147280 Amaranthus hybridus HOM05D005822 ORTHO05D007267 9.8e-26 121.3 150 49.3
Ciclev10004670m.g Citrus clementina HOM05D005822 ORTHO05D007267 9.8e-26 121.3 148 50.7
HPP92_012738 Vanilla planifolia HOM05D005822 ORTHO05D007267 9.8e-26 121.3 149 49.7
FvH4_7g27380 Fragaria vesca HOM05D005822 ORTHO05D007267 1.3e-25 120.9 149 50.3
HanXRQChr16g0512801 Helianthus annuus HOM05D005822 ORTHO05D007267 1.3e-25 120.9 148 50.0
Lj1A979T81 Lonicera japonica HOM05D005822 ORTHO05D007267 1.3e-25 120.9 148 50.7
THA.LOC104819450 Tarenaya hassleriana HOM05D005822 ORTHO05D007267 1.3e-25 120.9 152 49.3
Atru.chr8.1041 Acer truncatum HOM05D005822 ORTHO05D007267 1.7e-25 120.6 183 43.7
Lalb_Chr06g0161881 Lupinus albus HOM05D005822 ORTHO05D007267 1.7e-25 120.6 186 43.5
MD07G1252900 Malus domestica HOM05D005822 ORTHO05D007267 1.7e-25 120.6 149 49.7
CsaV3_5G005200 Cucumis sativus L. HOM05D005822 ORTHO05D007267 2.2e-25 120.2 148 50.0
Lsat_1_v5_gn_9_52001 Lactuca sativa HOM05D005822 ORTHO05D007267 2.9e-25 119.8 148 48.6
Os02g0104700 Oryza sativa ssp. japonica HOM05D005822 ORTHO05D007267 2.9e-25 119.8 150 47.3
CANSAT56G1500 Cannabis sativa HOM05D005822 ORTHO05D007267 3.7e-25 119.4 149 49.7
CiPaw.04G059500 Carya illinoinensis HOM05D005822 ORTHO05D007267 3.7e-25 119.4 149 51.0
Psat7g157640 Pisum sativum HOM05D005822 ORTHO05D007267 4.9e-25 119.0 167 46.1
Zm00001eb209870 Zea mays HOM05D005822 ORTHO05D007267 4.9e-25 119.0 149 47.7
Carub.0005s1354 Capsella rubella HOM05D005822 ORTHO05D007267 8.3e-25 118.2 159 45.9
FvH4_7g27641 Fragaria vesca HOM05D005822 ORTHO05D007267 8.3e-25 118.2 149 49.7
PGR042G1636 Punica granatum HOM05D005822 ORTHO05D007267 8.3e-25 118.2 166 45.2
CARHR156090 Cardamine hirsuta HOM05D005822 ORTHO05D007267 1.1e-24 117.9 154 46.8
Medtr2g060420 Medicago truncatula HOM05D005822 ORTHO05D007267 1.1e-24 117.9 167 45.5
PSO063G1588 Papaver somniferum HOM05D005822 ORTHO05D007267 1.1e-24 117.9 149 46.3
PSO782G2939 Papaver somniferum HOM05D005822 ORTHO05D007267 1.1e-24 117.9 149 46.3
FAN06G4841 Fragaria x ananassa HOM05D005822 ORTHO05D007267 1.4e-24 117.5 191 42.9
TPR.G20240 Trifolium pratense HOM05D005822 ORTHO05D007267 1.4e-24 117.5 150 48.7
BcaB01g00923 Brassica carinata HOM05D005822 ORTHO05D007267 2.4e-24 116.7 156 46.2
BolC3t19450H Brassica oleracea HOM05D005822 ORTHO05D007267 2.4e-24 116.7 156 46.8
Cfa008156 Carpinus fangiana HOM05D005822 ORTHO05D007267 2.4e-24 116.7 147 49.0
Haze_13887 Corylus avellana HOM05D005822 ORTHO05D007267 2.4e-24 116.7 147 49.0
A06p20210 Brassica napus HOM05D005822 ORTHO05D007267 3.2e-24 116.3 161 45.3
AL5G26670 Arabidopsis lyrata HOM05D005822 ORTHO05D007267 4.1e-24 115.9 156 46.2
DCAR_014621 Daucus carota HOM05D005822 ORTHO05D007267 4.1e-24 115.9 154 48.7
SalBow8G0561 Salvia bowleyana HOM05D005822 ORTHO05D007267 4.1e-24 115.9 149 47.0
ATR0317G089 Amborella trichopoda HOM05D005822 ORTHO05D007267 5.4e-24 115.5 150 50.0
AT3G47450 Arabidopsis thaliana HOM05D005822 ORTHO05D007267 9.2e-24 114.8 156 45.5
C03p71590 Brassica napus HOM05D005822 ORTHO05D007267 9.2e-24 114.8 156 46.2
Sp5g14430 Schrenkiella parvula HOM05D005822 ORTHO05D007267 1.2e-23 114.4 156 45.5
EL10Ac3g05850 Beta vulgaris HOM05D005822 ORTHO05D007267 1.6e-23 114.0 129 53.5
BraA06t25104Z Brassica rapa HOM05D005822 ORTHO05D007267 2.0e-23 113.6 152 46.7
Aa31LG4G16250 Aethionema arabicum HOM05D005822 ORTHO05D007267 2.7e-23 113.2 152 46.1
Thhalv10010252m.g Eutrema salsugineum HOM05D005822 ORTHO05D007267 2.7e-23 113.2 155 45.8
Rhsim03G0166500 Rhododendron simsii HOM05D005822 ORTHO05D007267 7.8e-23 111.7 177 43.5
BcaC01g01823 Brassica carinata HOM05D005822 ORTHO05D007267 1.0e-22 111.3 137 50.4
AUR62015490 Chenopodium quinoa HOM05D005822 ORTHO05D007267 1.0e-22 111.3 150 46.7
AUR62002209 Chenopodium quinoa HOM05D005822 ORTHO05D007267 1.7e-22 110.5 150 47.3
unitig_52.g17763 Utricularia gibba HOM05D005822 ORTHO05D007267 6.6e-22 108.6 149 45.0
vmacro06808 Vaccinium macrocarpon HOM05D005822 ORTHO05D007267 3.6e-20 102.8 206 37.9
COL.COLO4_14108 Corchorus olitorius HOM05D002696 ORTHO05D003940 3.1e-19 99.8 83 62.7
VMungo1127G1343 Vigna mungo HOM05D005822 ORTHO05D007267 4.4e-18 95.9 99 55.6
AagrBONN_evm.TU.Sc2ySwM_344.3689 Anthoceros agrestis HOM05D005822 ORTHO05D007267 2.9e-17 93.2 147 42.9
Ca_28037_v3 Cicer arietinum L. HOM05D005822 ORTHO05D007267 2.4e-16 90.1 72 65.3
Ca_30671_v3 Cicer arietinum L. HOM05D005822 ORTHO05D007267 2.4e-16 90.1 72 65.3
RcHm_v2.0_Chr1g0373881 Rosa chinensis HOM05D005822 ORTHO05D007267 2.4e-16 90.1 149 41.6
Pp3c7_23510 Physcomitrium patens HOM05D005822 ORTHO05D007267 5.4e-16 89.0 150 41.3
FvH4_7g27354 Fragaria vesca HOM05D005822 ORTHO05D007267 7.1e-16 88.6 125 48.0
FAN10G0261 Fragaria x ananassa HOM05D000009 ORTHO05D007267 3.5e-15 86.3 71 62.0
FAN10G2221 Fragaria x ananassa HOM05D005822 ORTHO05D007267 3.5e-15 86.3 71 62.0
PGSC0003DMG400014819 Solanum tuberosum HOM05D005822 ORTHO05D007267 3.5e-15 86.3 52 76.9
SMO367G0603 Selaginella moellendorffii HOM05D005822 ORTHO05D007267 1.1e-13 81.3 147 36.7
CBR_g34812 Chara braunii HOM05D005822 ORTHO05D007267 1.9e-13 80.5 144 40.3
Cfa008175 Carpinus fangiana HOM05D005822 ORTHO05D007267 2.1e-12 77.0 49 73.5
Mapoly0014s0202 Marchantia polymorpha HOM05D005822 ORTHO05D007267 3.6e-12 76.3 120 43.3
CDE04G0461 Ceratophyllum demersum HOM05D005822 ORTHO05D007267 1.4e-11 74.3 132 38.6
Actinidia37722 Actinidia chinensis HOM05D003721 ORTHO05D004074 3.2e-08 63.2 79 49.4
MELO3C005439.2 Cucumis melo HOM05D005822 ORTHO05D007267 3.5e-07 59.7 109 40.4
Nitab4.5_0002816g0040 Nicotiana tabacum HOM05D005822 ORTHO05D007267 7.8e-07 58.5 83 48.2
SEGI_33871 Sequoiadendron giganteum HOM05D005822 ORTHO05D007267 3.9e-06 56.2 34 76.5


User provided reference genes

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