Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra17G0109400 Salix brachista HOM05D008015 ORTHO05D009180 5.4e-153 544.3 269 100.0
Potri.017G131300 Populus trichocarpa HOM05D008015 ORTHO05D009180 4.2e-65 252.3 176 71.6
Potri.004G085100 Populus trichocarpa HOM05D008015 ORTHO05D009180 3.2e-57 226.1 183 65.6
Manes.02G078100 Manihot esculenta HOM05D008015 ORTHO05D009180 1.4e-31 141.0 184 48.4
QL02p059324 Quercus lobata HOM05D008015 ORTHO05D009180 1.8e-31 140.6 170 50.0
Ciclev10012847m.g Citrus clementina HOM05D008015 ORTHO05D009180 2.2e-29 133.7 173 47.4
TAR371G1005 Trochodendron aralioides HOM05D008015 ORTHO05D009180 6.3e-29 132.1 172 48.3
Duzib268G1603 Durio zibethinus HOM05D008015 ORTHO05D009180 6.6e-26 122.1 175 45.1
Oeu032314.1 Olea europaea HOM05D008015 ORTHO05D009180 2.5e-25 120.2 168 42.9
Nn4g24386 Nelumbo nucifera HOM05D008015 ORTHO05D009180 9.5e-25 118.2 199 41.2
Nn3g18370 Nelumbo nucifera HOM05D008015 ORTHO05D009180 6.1e-24 115.5 148 48.6
TAR629G2519 Trochodendron aralioides HOM05D008015 ORTHO05D009180 1.8e-23 114.0 179 48.6
LjContig00141g0001505 Lotus japonicus HOM05D008015 ORTHO05D009180 4.0e-23 112.8 170 41.8
Thecc.04G053900 Theobroma cacao HOM05D008015 ORTHO05D009180 4.0e-23 112.8 207 41.5
Cfa007792 Carpinus fangiana HOM05D008015 ORTHO05D009180 5.2e-23 112.5 180 43.9
Prupe.3G166400 Prunus persica HOM05D008015 ORTHO05D009180 5.2e-23 112.5 209 38.3
Medtr3g065210 Medicago truncatula HOM05D008015 ORTHO05D009180 6.8e-23 112.1 170 40.0
CiPaw.03G073500 Carya illinoinensis HOM05D008015 ORTHO05D009180 1.5e-22 110.9 177 41.8
Glyma.14G213100 Glycine max HOM05D008015 ORTHO05D009180 4.4e-22 109.4 176 40.9
Lalb_Chr18g0053531 Lupinus albus HOM05D008015 ORTHO05D009180 4.4e-22 109.4 167 43.1
Lalb_Chr15g0084981 Lupinus albus HOM05D008015 ORTHO05D009180 7.5e-22 108.6 188 41.0
Cpa.g.sc340.4 Carica papaya HOM05D008015 ORTHO05D009180 1.3e-21 107.8 200 40.0
VMungo0647G1978 Vigna mungo HOM05D008015 ORTHO05D009180 2.2e-21 107.1 172 43.6
ClCG03G008850 Citrullus lanatus HOM05D008015 ORTHO05D009180 2.4e-20 103.6 179 41.9
MD09G1270500 Malus domestica HOM05D008015 ORTHO05D009180 5.4e-20 102.4 211 33.6
TPR.G30001 Trifolium pratense HOM05D008015 ORTHO05D009180 7.0e-20 102.1 169 40.2
RcHm_v2.0_Chr3g0491241 Rosa chinensis HOM05D008015 ORTHO05D009180 5.9e-19 99.0 212 36.8
MELO3C022825.2 Cucumis melo HOM05D008015 ORTHO05D009180 1.3e-18 97.8 179 39.1
Cc07_g13270 Coffea canephora HOM05D008015 ORTHO05D009180 5.0e-18 95.9 176 38.6
Eucgr.F02874 Eucalyptus grandis HOM05D008015 ORTHO05D009180 1.1e-17 94.7 176 36.4
MBI19_g08383_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 1.9e-17 94.0 167 39.5
CSS0009801 Camellia sinensis var. sinensis HOM05D008015 ORTHO05D009180 2.5e-17 93.6 169 39.1
CSS0018355 Camellia sinensis var. sinensis HOM05D008015 ORTHO05D009180 2.5e-17 93.6 169 39.1
TWI77G0273 Tripterygium wilfordii HOM05D008015 ORTHO05D009180 2.5e-17 93.6 188 38.3
Lalb_Chr17g0346041 Lupinus albus HOM05D008015 ORTHO05D009180 3.3e-17 93.2 112 52.7
Sed0025761 Sechium edule HOM05D008015 ORTHO05D009180 4.3e-17 92.8 169 39.1
MSTRG.3702 Avicennia marina HOM05D008015 ORTHO05D009180 5.6e-17 92.4 174 37.9
FAN26G1918 Fragaria x ananassa HOM05D008015 ORTHO05D009180 5.6e-17 92.4 193 35.8
Glyma.18G041300 Glycine max HOM05D008015 ORTHO05D009180 2.1e-16 90.5 123 48.0
FAN23G1273 Fragaria x ananassa HOM05D008015 ORTHO05D009180 6.2e-16 89.0 193 35.8
CsaV3_5G023910 Cucumis sativus L. HOM05D009275 ORTHO05D009180 8.0e-16 88.6 160 39.4
Medtr5g077940 Medicago truncatula HOM05D008015 ORTHO05D009180 1.8e-15 87.4 190 35.8
DCAR_014163 Daucus carota HOM05D008015 ORTHO05D009180 4.0e-15 86.3 168 37.5
MBI13_g45895_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 4.0e-15 86.3 161 36.6
CANSAT35G1526 Cannabis sativa HOM05D008015 ORTHO05D009180 5.2e-15 85.9 173 37.6
Psat2g045760 Pisum sativum HOM05D008015 ORTHO05D009180 5.2e-15 85.9 96 50.0
SalBow5G5173 Salvia bowleyana HOM05D008015 ORTHO05D009180 4.4e-14 82.8 155 36.8
TWI74G1025 Tripterygium wilfordii HOM05D008015 ORTHO05D009180 5.8e-14 82.4 179 35.8
ATR0753G067 Amborella trichopoda HOM05D008015 ORTHO05D009180 9.8e-14 81.6 181 32.6
Actinidia35723 Actinidia chinensis HOM05D008015 ORTHO05D009180 1.7e-13 80.9 166 35.5
Phvul.001G229400 Phaseolus vulgaris HOM05D008015 ORTHO05D009180 1.7e-13 80.9 126 46.0
VMungo1383G2632 Vigna mungo HOM05D008015 ORTHO05D009180 1.7e-13 80.9 155 40.6
Dinv28182 Davidia involucrata HOM05D008015 ORTHO05D009180 2.2e-13 80.5 179 37.4
PSO478G3758 Papaver somniferum HOM05D008015 ORTHO05D009180 2.2e-13 80.5 170 35.9
FvH4_1g30203 Fragaria vesca HOM05D008015 ORTHO05D009180 3.7e-13 79.7 147 38.8
Gohir.D07G078200 Gossypium hirsutum HOM05D008015 ORTHO05D009180 1.1e-12 78.2 150 43.3
Phvul.008G237600 Phaseolus vulgaris HOM05D008015 ORTHO05D009180 1.4e-12 77.8 168 36.9
Gorai.001G082600 Gossypium raimondii HOM05D008015 ORTHO05D009180 1.9e-12 77.4 150 43.3
CDE05G1037 Ceratophyllum demersum HOM05D008015 ORTHO05D009180 2.4e-12 77.0 169 37.3
Gohir.A07G073500 Gossypium hirsutum HOM05D008015 ORTHO05D009180 4.1e-12 76.3 158 41.1
Rhsim10G0178500 Rhododendron simsii HOM05D008015 ORTHO05D009180 4.1e-12 76.3 177 34.5
Aqoxy1G02179 Aquilegia oxysepala HOM05D008015 ORTHO05D009180 5.4e-12 75.9 167 32.9
PGR004G2766 Punica granatum HOM05D009275 ORTHO05D009180 7.0e-12 75.5 205 30.7
CDE05G0668 Ceratophyllum demersum HOM05D006178 ORTHO05D007504 1.2e-11 74.7 171 36.8
COL.COLO4_13422 Corchorus olitorius HOM05D009275 ORTHO05D009180 1.6e-11 74.3 194 30.4
Actinidia28799 Actinidia chinensis HOM05D008015 ORTHO05D009180 2.7e-11 73.6 166 34.3
FAN19G3187 Fragaria x ananassa HOM05D008015 ORTHO05D009180 1.0e-10 71.6 169 33.7
CARHR215350 Cardamine hirsuta HOM05D009275 ORTHO05D009180 2.3e-10 70.5 185 30.3
MBI13_g14024_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 2.3e-10 70.5 108 39.8
Aa31LG9G17500 Aethionema arabicum HOM05D009275 ORTHO05D009180 8.6e-10 68.6 171 32.2
Thhalv10027910m.g Eutrema salsugineum HOM05D009275 ORTHO05D009180 1.1e-09 68.2 165 31.5
MBI13_g24899_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 1.5e-09 67.8 68 52.9
BcaB06g27100 Brassica carinata HOM05D009275 ORTHO05D009180 5.6e-09 65.9 170 31.2
AL7G46310 Arabidopsis lyrata HOM05D009275 ORTHO05D009180 7.3e-09 65.5 169 32.5
Glyma.11G215300 Glycine max HOM05D008015 ORTHO05D009180 7.3e-09 65.5 111 42.3
CARHR292200 Cardamine hirsuta HOM05D009275 ORTHO05D009180 9.5e-09 65.1 117 35.0
SGA_v2.0_scaffold45G17152 Striga asiatica HOM05D008015 ORTHO05D009180 9.5e-09 65.1 110 39.1
Thhalv10019019m.g Eutrema salsugineum HOM05D009275 ORTHO05D009180 1.2e-08 64.7 140 34.3
Aa31LG2G2900 Aethionema arabicum HOM05D009275 ORTHO05D009180 2.1e-08 63.9 210 30.0
AT5G37550 Arabidopsis thaliana HOM05D009275 ORTHO05D009180 3.6e-08 63.2 169 32.5
Lsat_1_v5_gn_8_114880 Lactuca sativa HOM05D008015 ORTHO05D009180 4.7e-08 62.8 187 31.6
Sp7g04570 Schrenkiella parvula HOM05D009275 ORTHO05D009180 4.7e-08 62.8 94 41.5
BcaC02g09585 Brassica carinata HOM05D009275 ORTHO05D009180 8.1e-08 62.0 171 31.0
C04p44430 Brassica napus HOM05D009275 ORTHO05D009180 8.1e-08 62.0 171 31.0
BolC4t26014H Brassica oleracea HOM05D009275 ORTHO05D009180 8.1e-08 62.0 171 31.0
BraA04t16736Z Brassica rapa HOM05D009275 ORTHO05D009180 8.1e-08 62.0 166 31.9
A04p10720 Brassica napus HOM05D009275 ORTHO05D009180 1.4e-07 61.2 166 31.3
AL2G23880 Arabidopsis lyrata HOM05D009275 ORTHO05D009180 4.0e-07 59.7 144 34.0
Actinidia17202 Actinidia chinensis HOM05D008015 ORTHO05D009180 5.2e-07 59.3 106 35.8
BcaB05g24157 Brassica carinata HOM05D009275 ORTHO05D009180 1.2e-06 58.2 187 29.4
Carub.0007s3272 Capsella rubella HOM05D009275 ORTHO05D009180 1.5e-06 57.8 175 30.9
Sp5g21250 Schrenkiella parvula HOM05D009275 ORTHO05D009180 2.0e-06 57.4 106 36.8
arahy.Tifrunner.gnm1.ann1.NRE7W4 Arachis hypogaea HOM05D009275 ORTHO05D009180 7.5e-06 55.5 106 37.7
A02p13520 Brassica napus HOM05D009275 ORTHO05D009180 7.5e-06 55.5 97 38.1


User provided reference genes

Program Settings