Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra17G0109200 Salix brachista HOM05D005365 ORTHO05D349400 6.5e-114 414.1 210 100.0
Potri.004G085500 Populus trichocarpa HOM05D005365 ORTHO05D006910 2.5e-33 146.4 341 36.4
Sabra04G0056600 Salix brachista HOM05D005365 ORTHO05D006910 3.4e-22 109.4 321 32.7
Atru.chr1.1986 Acer truncatum HOM05D005365 ORTHO05D006910 1.5e-17 94.0 338 27.2
Manes.03G027200 Manihot esculenta HOM05D005365 ORTHO05D006910 2.2e-16 90.1 336 29.5
Cfa007794 Carpinus fangiana HOM05D005365 ORTHO05D006910 3.7e-16 89.4 343 27.4
TAR374G0610 Trochodendron aralioides HOM05D005365 ORTHO05D006910 1.4e-15 87.4 341 28.7
Prupe.3G017700 Prunus persica HOM05D005365 ORTHO05D006910 9.1e-15 84.7 333 26.4
Dinv19044 Davidia involucrata HOM05D005365 ORTHO05D006910 4.5e-14 82.4 351 27.1
Ciclev10010965m.g Citrus clementina HOM05D005365 ORTHO05D006910 1.7e-13 80.5 336 28.0
TWI77G0914 Tripterygium wilfordii HOM05D005365 ORTHO05D006910 2.9e-13 79.7 338 27.5
FAN26G1336 Fragaria x ananassa HOM05D005365 ORTHO05D006910 3.8e-13 79.3 91 50.5
Thecc.04G055200 Theobroma cacao HOM05D005365 ORTHO05D006910 1.1e-12 77.8 334 26.3
Cpa.g.sc116.71 Carica papaya HOM05D005365 ORTHO05D006910 3.2e-12 76.3 339 28.0
Actinidia06487 Actinidia chinensis HOM05D005365 ORTHO05D006910 4.2e-12 75.9 332 25.6
Duzib133G0311 Durio zibethinus HOM05D005365 ORTHO05D006910 4.2e-12 75.9 339 26.0
CSS0046739 Camellia sinensis var. sinensis HOM05D005365 ORTHO05D006910 5.5e-12 75.5 286 28.0
GSVIVG01014028001 Vitis vinifera HOM05D005365 ORTHO05D006910 5.5e-12 75.5 341 26.1
Medtr3g065300 Medicago truncatula HOM05D005365 ORTHO05D006910 9.4e-12 74.7 347 25.1
QL02p059099 Quercus lobata HOM05D005365 ORTHO05D006910 9.4e-12 74.7 343 27.1
Ca_17092_v3 Cicer arietinum L. HOM05D005365 ORTHO05D006910 1.6e-11 73.9 353 26.1
Ca_17099_v3 Cicer arietinum L. HOM05D005365 ORTHO05D006910 1.6e-11 73.9 353 26.1
Nn4g24353 Nelumbo nucifera HOM05D005365 ORTHO05D006910 1.6e-11 73.9 360 24.4
Haze_14277 Corylus avellana HOM05D005365 ORTHO05D006910 3.6e-11 72.8 130 39.2
Gorai.007G187500 Gossypium raimondii HOM05D005365 ORTHO05D006910 3.6e-11 72.8 340 26.5
RcHm_v2.0_Chr3g0491161 Rosa chinensis HOM05D005365 ORTHO05D006910 3.6e-11 72.8 91 47.3
MD17G1268900 Malus domestica HOM05D005365 ORTHO05D006910 6.1e-11 72.0 92 47.8
Lj6g0003323 Lotus japonicus HOM05D005365 ORTHO05D006910 7.9e-11 71.6 337 26.1
CiPaw.03G073200 Carya illinoinensis HOM05D005365 ORTHO05D006910 1.0e-10 71.2 228 31.1
FAN19G1822 Fragaria x ananassa HOM05D005365 ORTHO05D006910 2.3e-10 70.1 304 27.0
Phvul.001G229600 Phaseolus vulgaris HOM05D005365 ORTHO05D006910 2.3e-10 70.1 90 50.0
Lj2C520T1 Lonicera japonica HOM05D005365 ORTHO05D006910 3.0e-10 69.7 90 44.4
Glyma.11G215600 Glycine max HOM05D005365 ORTHO05D006910 5.1e-10 68.9 88 47.7
MD09G1270700 Malus domestica HOM05D005365 ORTHO05D006910 2.0e-09 67.0 92 44.6
Peaxi162Scf00562g00038 Petunia axillaris HOM05D005365 ORTHO05D006910 3.3e-09 66.2 331 25.1
VMungo1383G2900 Vigna mungo HOM05D005365 ORTHO05D006910 4.4e-09 65.9 90 47.8
COL.COLO4_13431 Corchorus olitorius HOM05D005365 ORTHO05D006910 7.4e-09 65.1 82 47.6
MELO3C022831.2 Cucumis melo HOM05D005365 ORTHO05D006910 7.4e-09 65.1 91 46.2
CsaV3_5G023940 Cucumis sativus L. HOM05D005365 ORTHO05D006910 1.3e-08 64.3 91 45.1
Aqoxy2G03929 Aquilegia oxysepala HOM05D005365 ORTHO05D006910 1.7e-08 63.9 346 23.7
CSS0031268 Camellia sinensis var. sinensis HOM05D005365 ORTHO05D006910 1.7e-08 63.9 87 47.1
ClCG03G008820 Citrullus lanatus HOM05D005365 ORTHO05D006910 1.7e-08 63.9 83 47.0
MSTRG.15661 Avicennia marina HOM05D005365 ORTHO05D006910 4.8e-08 62.4 260 29.2
A04p10780 Brassica napus HOM05D005365 ORTHO05D006910 8.2e-08 61.6 115 39.1
BraA04t16742Z Brassica rapa HOM05D005365 ORTHO05D006910 8.2e-08 61.6 115 39.1
Thhalv10027629m.g Eutrema salsugineum HOM05D005365 ORTHO05D006910 1.4e-07 60.8 123 36.6
Eucgr.F02871 Eucalyptus grandis HOM05D005365 ORTHO05D006910 1.8e-07 60.5 90 41.1
Actinidia17204 Actinidia chinensis HOM05D005365 ORTHO05D006910 2.4e-07 60.1 78 43.6
AUR62018225 Chenopodium quinoa HOM05D005365 ORTHO05D006910 4.1e-07 59.3 90 44.4
arahy.Tifrunner.gnm1.ann1.WJY350 Arachis hypogaea HOM05D005365 ORTHO05D006910 7.0e-07 58.5 82 47.6
Oeu012492.1 Olea europaea HOM05D005365 ORTHO05D006910 7.0e-07 58.5 88 42.0
PGR004G1341 Punica granatum HOM05D005365 ORTHO05D006910 7.0e-07 58.5 332 24.4
AUR62037789 Chenopodium quinoa HOM05D005365 ORTHO05D006910 1.2e-06 57.8 85 42.4
THA.LOC104805627 Tarenaya hassleriana HOM05D005365 ORTHO05D006910 1.2e-06 57.8 129 35.7
AL7G46400 Arabidopsis lyrata HOM05D005365 ORTHO05D006910 1.5e-06 57.4 327 24.2
TPR.G674 Trifolium pratense HOM05D005365 ORTHO05D006910 2.6e-06 56.6 71 46.5
Aa31LG9G17470 Aethionema arabicum HOM05D005365 ORTHO05D006910 4.5e-06 55.8 124 34.7
ECA238G2923 Erigeron canadensis HOM05D005365 ORTHO05D006910 4.5e-06 55.8 315 25.4
Hma1.2p1_1583F.1_g291990 Hydrangea macrophylla HOM05D005365 ORTHO05D006910 5.9e-06 55.5 74 45.9


User provided reference genes

Program Settings