Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra17G0096900 Salix brachista HOM05D003134 ORTHO05D003500 5.1e-38 161.0 108 100.0
Potri.017G117866 Populus trichocarpa HOM05D003134 ORTHO05D003500 3.7e-28 128.3 108 85.2
Sabra04G0066000 Salix brachista HOM05D003134 ORTHO05D003500 7.2e-24 114.0 108 63.0
Potri.004G097200 Populus trichocarpa HOM05D003134 ORTHO05D003500 7.7e-18 94.0 108 72.2
Manes.02G070500 Manihot esculenta HOM05D003134 ORTHO05D003500 6.5e-17 90.9 112 65.2
Ciclev10013038m.g Citrus clementina HOM05D003134 ORTHO05D003500 4.4e-13 78.2 105 47.6
Atru.chr1.1630 Acer truncatum HOM05D003134 ORTHO05D003500 7.4e-13 77.4 106 50.0
ClCG11G007810 Citrullus lanatus HOM05D003134 ORTHO05D003500 7.0e-11 70.9 99 45.5
Manes.01G112200 Manihot esculenta HOM05D003134 ORTHO05D003500 7.0e-11 70.9 119 42.9
MD17G1247700 Malus domestica HOM05D003134 ORTHO05D003500 1.2e-10 70.1 119 43.7
CANSAT78G1475 Cannabis sativa HOM05D003134 ORTHO05D003500 1.6e-10 69.7 121 44.6
Cpa.g.sc170.42 Carica papaya HOM05D003134 ORTHO05D003500 1.6e-10 69.7 124 42.7
SalBow5G3107 Salvia bowleyana HOM05D003134 ORTHO05D003500 2.6e-10 68.9 102 49.0
SalBow5G4218 Salvia bowleyana HOM05D003134 ORTHO05D003500 2.6e-10 68.9 102 49.0
Cc07_g08620 Coffea canephora HOM05D003134 ORTHO05D003500 7.7e-10 67.4 124 51.6
FAN03G2307 Fragaria x ananassa HOM05D003134 ORTHO05D003500 1.3e-09 66.6 113 46.0
Prupe.3G146400 Prunus persica HOM05D003134 ORTHO05D003500 2.2e-09 65.9 85 51.8
THA.LOC104805579 Tarenaya hassleriana HOM05D003134 ORTHO05D003500 2.2e-09 65.9 83 48.2
FAN14G3652 Fragaria x ananassa HOM05D003134 ORTHO05D003500 2.9e-09 65.5 112 44.6
TAR374G1690 Trochodendron aralioides HOM05D003134 ORTHO05D003500 2.9e-09 65.5 114 43.0
Haze_14180 Corylus avellana HOM05D003134 ORTHO05D003500 3.8e-09 65.1 128 42.2
Lj4P188T25 Lonicera japonica HOM05D003134 ORTHO05D003500 3.8e-09 65.1 109 45.9
Nn3g17932 Nelumbo nucifera HOM05D003134 ORTHO05D003500 3.8e-09 65.1 122 40.2
Duzib138G0856 Durio zibethinus HOM05D003134 ORTHO05D003500 5.0e-09 64.7 72 48.6
Dinv34801 Davidia involucrata HOM05D003134 ORTHO05D003500 6.5e-09 64.3 118 46.6
Sed0003377 Sechium edule HOM05D003134 ORTHO05D003500 6.5e-09 64.3 80 47.5
Cfa007900 Carpinus fangiana HOM05D003134 ORTHO05D003500 8.5e-09 63.9 129 39.5
CsaV3_2G033780 Cucumis sativus L. HOM05D003134 ORTHO05D003500 8.5e-09 63.9 90 48.9
Hma1.2p1_1109F.1_g258190 Hydrangea macrophylla HOM05D003134 ORTHO05D003500 8.5e-09 63.9 109 42.2
MD13G1036300 Malus domestica HOM05D003134 ORTHO05D003500 8.5e-09 63.9 86 48.8
Sed0007756 Sechium edule HOM05D003134 ORTHO05D003500 8.5e-09 63.9 102 41.2
THA.LOC104823851 Tarenaya hassleriana HOM05D003134 ORTHO05D003500 8.5e-09 63.9 114 43.9
Duzib133G1507 Durio zibethinus HOM05D003134 ORTHO05D003500 2.5e-08 62.4 74 47.3
Sp7g03820 Schrenkiella parvula HOM05D003134 ORTHO05D003500 2.5e-08 62.4 118 39.8
Dinv33962 Davidia involucrata HOM05D003134 ORTHO05D003500 3.2e-08 62.0 118 41.5
MD16G1038900 Malus domestica HOM05D003134 ORTHO05D003500 3.2e-08 62.0 86 46.5
QL02p050634 Quercus lobata HOM05D003134 ORTHO05D003500 4.2e-08 61.6 92 55.4
Gohir.A11G165400 Gossypium hirsutum HOM05D003134 ORTHO05D003500 5.5e-08 61.2 74 45.9
Gohir.D11G171400 Gossypium hirsutum HOM05D003134 ORTHO05D003500 5.5e-08 61.2 74 45.9
Gorai.007G183800 Gossypium raimondii HOM05D003134 ORTHO05D003500 5.5e-08 61.2 74 45.9
Sp5g21880 Schrenkiella parvula HOM05D003134 ORTHO05D003500 5.5e-08 61.2 125 36.8
TAR433G0003 Trochodendron aralioides HOM05D003134 ORTHO05D003500 5.5e-08 61.2 113 40.7
Prupe.1G315800 Prunus persica HOM05D003134 ORTHO05D003500 7.2e-08 60.8 110 43.6
MELO3C008147.2 Cucumis melo HOM05D003134 ORTHO05D003500 9.4e-08 60.5 125 39.2
FAN01G0579 Fragaria x ananassa HOM05D003134 ORTHO05D003500 9.4e-08 60.5 97 44.3
FAN02G1640 Fragaria x ananassa HOM05D003134 ORTHO05D003500 9.4e-08 60.5 113 43.4
TAR622G0779 Trochodendron aralioides HOM05D003134 ORTHO05D003500 9.4e-08 60.5 75 46.7
TAR622G1269 Trochodendron aralioides HOM05D003134 ORTHO05D003500 9.4e-08 60.5 75 46.7
C06p43260 Brassica napus HOM05D003134 ORTHO05D003500 1.2e-07 60.1 125 34.4
CSS0042149 Camellia sinensis var. sinensis HOM05D003134 ORTHO05D003500 1.2e-07 60.1 122 41.0
CiPaw.03G063500 Carya illinoinensis HOM05D003134 ORTHO05D003500 1.2e-07 60.1 142 33.8
RcHm_v2.0_Chr4g0434621 Rosa chinensis HOM05D003134 ORTHO05D003500 1.2e-07 60.1 109 44.0
Migut.L00500 Erythranthe guttata HOM05D003134 ORTHO05D003500 1.6e-07 59.7 90 47.8
Phvul.008G007800 Phaseolus vulgaris HOM05D003134 ORTHO05D003500 1.6e-07 59.7 104 44.2
Solyc02g086260.1 Solanum lycopersicum HOM05D003134 ORTHO05D003500 1.6e-07 59.7 117 42.7
CARHR059040 Cardamine hirsuta HOM05D003134 ORTHO05D003500 2.7e-07 58.9 129 41.9
Ca_08085_v3 Cicer arietinum L. HOM05D003134 ORTHO05D003500 2.7e-07 58.9 121 38.8
QL02p049588 Quercus lobata HOM05D003134 ORTHO05D003500 2.7e-07 58.9 91 53.8
AL2G25140 Arabidopsis lyrata HOM05D003134 ORTHO05D003500 4.7e-07 58.2 124 35.5
QL01p040313 Quercus lobata HOM05D003134 ORTHO05D003500 4.7e-07 58.2 94 40.4
RcHm_v2.0_Chr1g0326241 Rosa chinensis HOM05D003134 ORTHO05D003500 4.7e-07 58.2 82 46.3
Migut.H00233 Erythranthe guttata HOM05D003134 ORTHO05D003500 6.1e-07 57.8 85 48.2
CiPaw.04G043700 Carya illinoinensis HOM05D003134 ORTHO05D003500 8.0e-07 57.4 89 41.6
Oeu012575.1 Olea europaea HOM05D003134 ORTHO05D003500 8.0e-07 57.4 94 41.5
Oeu012577.1 Olea europaea HOM05D003134 ORTHO05D003500 8.0e-07 57.4 94 41.5
PGR004G0132 Punica granatum HOM05D003134 ORTHO05D003500 8.0e-07 57.4 82 47.6
Rhsim08G0083300 Rhododendron simsii HOM05D003134 ORTHO05D003500 1.0e-06 57.0 97 42.3
TPR.G36596 Trifolium pratense HOM05D003134 ORTHO05D003500 1.0e-06 57.0 123 37.4
BcaC08g46122 Brassica carinata HOM05D003134 ORTHO05D003500 1.4e-06 56.6 127 35.4
A07p33710 Brassica napus HOM05D003134 ORTHO05D003500 1.4e-06 56.6 127 35.4
BraA07t30998Z Brassica rapa HOM05D003134 ORTHO05D003500 1.4e-06 56.6 126 35.7
Eucgr.J01514 Eucalyptus grandis HOM05D003134 ORTHO05D003500 1.4e-06 56.6 126 46.8
Lsat_1_v5_gn_3_80541 Lactuca sativa HOM05D003134 ORTHO05D003500 1.4e-06 56.6 123 39.8
VMungo1383G0351 Vigna mungo HOM05D003134 ORTHO05D003500 1.4e-06 56.6 113 37.2
Carub.0002s1311 Capsella rubella HOM05D003134 ORTHO05D003500 1.8e-06 56.2 124 41.9
Thhalv10019248m.g Eutrema salsugineum HOM05D003134 ORTHO05D003500 1.8e-06 56.2 127 37.0
Psat3g098080 Pisum sativum HOM05D003134 ORTHO05D003500 2.3e-06 55.8 125 37.6
Cfa015853 Carpinus fangiana HOM05D003134 ORTHO05D003500 3.0e-06 55.5 92 44.6
PGR042G1462 Punica granatum HOM05D003134 ORTHO05D003500 3.0e-06 55.5 99 40.4
SGA_v2.0_scaffold49G18114 Striga asiatica HOM05D003134 ORTHO05D003500 3.0e-06 55.5 94 40.4
Thecc.04G129900 Theobroma cacao HOM05D003134 ORTHO05D003500 3.0e-06 55.5 28 92.9
FAN10G2348 Fragaria x ananassa HOM05D003134 ORTHO05D003500 4.0e-06 55.1 112 41.1
FvH4_4g26860 Fragaria vesca HOM05D003134 ORTHO05D003500 5.2e-06 54.7 111 42.3
FAN23G1965 Fragaria x ananassa HOM05D003134 ORTHO05D003500 5.2e-06 54.7 110 42.7
Glyma.02G088600 Glycine max HOM05D003134 ORTHO05D003500 5.2e-06 54.7 110 39.1
AT1G66890 Arabidopsis thaliana HOM05D003134 ORTHO05D003500 6.7e-06 54.3 126 35.7
Lalb_Chr10g0091341 Lupinus albus HOM05D003134 ORTHO05D003500 6.7e-06 54.3 83 47.0
Oeu039736.1 Olea europaea HOM05D003134 ORTHO05D003500 6.7e-06 54.3 96 38.5
SalBow3G2725 Salvia bowleyana HOM05D003134 ORTHO05D003500 6.7e-06 54.3 86 47.7
FAN28G2684 Fragaria x ananassa HOM05D003134 ORTHO05D003500 8.8e-06 53.9 112 49.1


User provided reference genes

Program Settings