Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra17G0093400 Salix brachista HOM05D006042 ORTHO05D007658 8.2e-70 266.9 134 100.0
Aqoxy3G03922 Aquilegia oxysepala HOM05D006042 ORTHO05D007658 1.6e-20 103.2 79 70.9
Potri.004G102100 Populus trichocarpa HOM05D006042 ORTHO05D007658 1.6e-20 103.2 79 72.2
Lj2C447G3 Lonicera japonica HOM05D006042 ORTHO05D007658 2.7e-20 102.4 62 82.3
Atru.chr8.825 Acer truncatum HOM05D006042 ORTHO05D007658 3.5e-20 102.1 79 72.2
Glyma.19G045600 Glycine max HOM05D006042 ORTHO05D007658 3.5e-20 102.1 83 68.7
Haze_14131 Corylus avellana HOM05D006042 ORTHO05D007658 4.6e-20 101.7 70 74.3
SGA_v2.0_scaffold49G18090 Striga asiatica HOM05D006042 ORTHO05D007658 4.6e-20 101.7 79 70.9
CSS0008868 Camellia sinensis var. sinensis HOM05D006042 ORTHO05D007658 6.0e-20 101.3 79 69.6
Dinv34847 Davidia involucrata HOM05D006042 ORTHO05D007658 6.0e-20 101.3 79 69.6
Rhsim08G0079500 Rhododendron simsii HOM05D006042 ORTHO05D007658 6.0e-20 101.3 79 68.4
Solyc03g034170.4 Solanum lycopersicum HOM05D006042 ORTHO05D007658 6.0e-20 101.3 79 68.4
Sopen03g006950 Solanum pennellii HOM05D006042 ORTHO05D007658 6.0e-20 101.3 79 68.4
Hma1.2p1_0550F.1_g177260 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 1.0e-19 100.5 79 68.4
Hma1.2p1_0550F.1_g177265 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 1.0e-19 100.5 79 68.4
ATR0589G121 Amborella trichopoda HOM05D006042 ORTHO05D007658 1.3e-19 100.1 90 61.1
CDE09G0042 Ceratophyllum demersum HOM05D006042 ORTHO05D007658 1.3e-19 100.1 108 53.7
COL.COLO4_16190 Corchorus olitorius HOM05D002377 ORTHO05D007658 1.3e-19 100.1 79 70.9
Eucgr.F02481 Eucalyptus grandis HOM05D006042 ORTHO05D007658 1.3e-19 100.1 79 68.4
Lsat_1_v5_gn_4_153081 Lactuca sativa HOM05D006042 ORTHO05D007658 1.3e-19 100.1 79 69.6
PGSC0003DMG400019582 Solanum tuberosum HOM05D006042 ORTHO05D007658 1.3e-19 100.1 79 67.1
Lalb_Chr06g0174661 Lupinus albus HOM05D006042 ORTHO05D007658 1.7e-19 99.8 83 65.1
MBI09_g40289_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 1.7e-19 99.8 79 68.4
MBI09_g41181_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 1.7e-19 99.8 79 68.4
arahy.Tifrunner.gnm1.ann1.4I03R9 Arachis hypogaea HOM05D006042 ORTHO05D007658 2.3e-19 99.4 79 69.6
arahy.Tifrunner.gnm1.ann1.TWH6SW Arachis hypogaea HOM05D006042 ORTHO05D007658 2.3e-19 99.4 79 69.6
CAN.G995.2 Capsicum annuum HOM05D006042 ORTHO05D007658 2.3e-19 99.4 79 65.8
DCAR_009854 Daucus carota HOM05D006042 ORTHO05D007658 2.3e-19 99.4 79 67.1
Migut.H00201 Erythranthe guttata HOM05D006042 ORTHO05D007658 2.3e-19 99.4 78 69.2
Potri.017G112700 Populus trichocarpa HOM05D006042 ORTHO05D007658 2.3e-19 99.4 79 69.6
Actinidia26288 Actinidia chinensis HOM05D006042 ORTHO05D007658 3.0e-19 99.0 79 69.6
Oeu030760.1 Olea europaea HOM05D006042 ORTHO05D007658 3.0e-19 99.0 79 68.4
Phvul.004G063000 Phaseolus vulgaris HOM05D006042 ORTHO05D007658 3.0e-19 99.0 83 63.9
Sc10g0001330 Simmondsia chinensis HOM05D006042 ORTHO05D007658 3.0e-19 99.0 84 60.7
AUR62014538 Chenopodium quinoa HOM05D006042 ORTHO05D007658 3.9e-19 98.6 90 60.0
HanXRQChr14g0438681 Helianthus annuus HOM05D006042 ORTHO05D007658 3.9e-19 98.6 79 68.4
Nitab4.5_0002489g0020 Nicotiana tabacum HOM05D006042 ORTHO05D007658 3.9e-19 98.6 79 65.8
Nitab4.5_0004721g0010 Nicotiana tabacum HOM05D006042 ORTHO05D007658 3.9e-19 98.6 79 65.8
TAR278G0002 Trochodendron aralioides HOM05D006042 ORTHO05D007658 3.9e-19 98.6 84 61.9
CiPaw.03G059800 Carya illinoinensis HOM05D006042 ORTHO05D007658 5.1e-19 98.2 62 79.0
ECA232G3341 Erigeron canadensis HOM05D006042 ORTHO05D007658 5.1e-19 98.2 79 67.1
Gohir.A11G162500 Gossypium hirsutum HOM05D006042 ORTHO05D007658 5.1e-19 98.2 79 70.9
Gohir.D11G168732 Gossypium hirsutum HOM05D006042 ORTHO05D007658 5.1e-19 98.2 89 65.2
Gorai.007G180300 Gossypium raimondii HOM05D006042 ORTHO05D007658 5.1e-19 98.2 89 65.2
vmacro18106 Vaccinium macrocarpon HOM05D006042 ORTHO05D007658 5.1e-19 98.2 79 68.4
Cfa007944 Carpinus fangiana HOM05D006042 ORTHO05D007658 6.6e-19 97.8 79 68.4
Ca_26178_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 6.6e-19 97.8 79 68.4
Ca_30067_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 6.6e-19 97.8 79 68.4
PSO063G0034 Papaver somniferum HOM05D006042 ORTHO05D007658 6.6e-19 97.8 79 68.4
QL02p052540 Quercus lobata HOM05D006042 ORTHO05D007658 6.6e-19 97.8 79 68.4
TWI53G1226 Tripterygium wilfordii HOM05D006042 ORTHO05D007658 6.6e-19 97.8 101 57.4
MSTRG.2747 Avicennia marina HOM05D006042 ORTHO05D007658 8.6e-19 97.4 79 67.1
Lj2g0022623 Lotus japonicus HOM05D006042 ORTHO05D007658 8.6e-19 97.4 83 62.7
VMungo0464G1707 Vigna mungo HOM05D006042 ORTHO05D007658 8.6e-19 97.4 83 63.9
CsaV3_5G039130 Cucumis sativus L. HOM05D006042 ORTHO05D007658 1.1e-18 97.1 79 68.4
Medtr6g017260 Medicago truncatula HOM05D006042 ORTHO05D007658 1.5e-18 96.7 79 68.4
ClCG11G005350 Citrullus lanatus HOM05D006042 ORTHO05D007658 1.9e-18 96.3 79 67.1
Psat1g013000 Pisum sativum HOM05D006042 ORTHO05D007658 1.9e-18 96.3 79 68.4
EL10Ac2g04605 Beta vulgaris HOM05D006042 ORTHO05D007658 2.5e-18 95.9 84 60.7
AUR62008965 Chenopodium quinoa HOM05D006042 ORTHO05D007658 2.5e-18 95.9 84 59.5
FAN02G0945 Fragaria x ananassa HOM05D006042 ORTHO05D007658 2.5e-18 95.9 61 77.0
PGR004G1523 Punica granatum HOM05D006042 ORTHO05D007658 3.3e-18 95.5 79 64.6
Sed0018352 Sechium edule HOM05D006042 ORTHO05D007658 3.3e-18 95.5 79 67.1
Duzib138G1312 Durio zibethinus HOM05D006042 ORTHO05D007658 4.3e-18 95.1 101 56.4
Manes.02G066700 Manihot esculenta HOM05D006042 ORTHO05D007658 4.3e-18 95.1 79 67.1
TPR.G32447 Trifolium pratense HOM05D006042 ORTHO05D007658 4.3e-18 95.1 79 68.4
Cc07_g09000 Coffea canephora HOM05D006042 ORTHO05D007658 5.6e-18 94.7 62 74.2
PSO782G1563 Papaver somniferum HOM05D006042 ORTHO05D007658 5.6e-18 94.7 79 67.1
Thecc.04G137400 Theobroma cacao HOM05D006042 ORTHO05D007658 7.3e-18 94.4 79 67.1
AL7G51880 Arabidopsis lyrata HOM05D006042 ORTHO05D007658 9.5e-18 94.0 78 67.9
Thhalv10027870m.g Eutrema salsugineum HOM05D006042 ORTHO05D007658 9.5e-18 94.0 78 67.9
Nn3g17761 Nelumbo nucifera HOM05D006042 ORTHO05D007658 9.5e-18 94.0 62 72.6
Ciclev10012434m.g Citrus clementina HOM05D006042 ORTHO05D007658 1.2e-17 93.6 79 63.3
FvH4_6g45340 Fragaria vesca HOM05D006042 ORTHO05D007658 1.2e-17 93.6 61 75.4
FAN05G0122 Fragaria x ananassa HOM05D006042 ORTHO05D007658 1.2e-17 93.6 61 75.4
FAN09G0627 Fragaria x ananassa HOM05D006042 ORTHO05D007658 1.2e-17 93.6 61 75.4
FAN14G4491 Fragaria x ananassa HOM05D006042 ORTHO05D007658 1.2e-17 93.6 61 75.4
GSVIVG01036442001 Vitis vinifera HOM05D006042 ORTHO05D007658 1.6e-17 93.2 79 65.8
Aa31LG9G16960 Aethionema arabicum HOM05D006042 ORTHO05D007658 2.1e-17 92.8 61 75.4
Carub.0007s3720 Capsella rubella HOM05D006042 ORTHO05D007658 2.1e-17 92.8 78 66.7
Sp1g29720 Schrenkiella parvula HOM05D006042 ORTHO05D007658 2.1e-17 92.8 78 66.7
Hund16127 Selenicereus undatus HOM05D006042 ORTHO05D007658 2.1e-17 92.8 88 56.8
CANSAT64G1085 Cannabis sativa HOM05D006042 ORTHO05D007658 2.8e-17 92.4 83 63.9
CARHR214100 Cardamine hirsuta HOM05D006042 ORTHO05D007658 4.7e-17 91.7 78 65.4
MD17G1074400 Malus domestica HOM05D006042 ORTHO05D007658 6.2e-17 91.3 78 66.7
Os08g0359000 Oryza sativa ssp. japonica HOM05D006042 ORTHO05D007658 6.2e-17 91.3 78 62.8
Zm00001eb042940 Zea mays HOM05D006042 ORTHO05D007658 6.2e-17 91.3 79 60.8
Prupe.3G239600 Prunus persica HOM05D006042 ORTHO05D007658 1.8e-16 89.7 61 75.4
RcHm_v2.0_Chr2g0163121 Rosa chinensis HOM05D006042 ORTHO05D007658 1.8e-16 89.7 83 57.8
SalBow3G2575 Salvia bowleyana HOM05D006042 ORTHO05D007658 1.8e-16 89.7 84 59.5
SalBow3G3727 Salvia bowleyana HOM05D006042 ORTHO05D007658 1.8e-16 89.7 84 59.5
AT5G38660 Arabidopsis thaliana HOM05D006042 ORTHO05D007658 2.3e-16 89.4 78 64.1
BcaB02g07998 Brassica carinata HOM05D006042 ORTHO05D007658 3.1e-16 89.0 78 65.4
BcaC08g44400 Brassica carinata HOM05D006042 ORTHO05D007658 3.1e-16 89.0 78 65.4
A07p19810 Brassica napus HOM05D006042 ORTHO05D007658 3.1e-16 89.0 78 65.4
C06p18330 Brassica napus HOM05D006042 ORTHO05D007658 3.1e-16 89.0 78 65.4
BolC6t37045H Brassica oleracea HOM05D006042 ORTHO05D007658 3.1e-16 89.0 78 65.4
BraA07t29682Z Brassica rapa HOM05D006042 ORTHO05D007658 3.1e-16 89.0 78 65.4
MD09G1084900 Malus domestica HOM05D006042 ORTHO05D007658 3.1e-16 89.0 78 65.4
HPP92_008047 Vanilla planifolia HOM05D006042 ORTHO05D007658 3.1e-16 89.0 79 62.0
THA.LOC104805550 Tarenaya hassleriana HOM05D006042 ORTHO05D007658 4.0e-16 88.6 83 60.2
SEGI_07967 Sequoiadendron giganteum HOM05D006042 ORTHO05D007658 6.8e-16 87.8 88 58.0
SMO232G0004 Selaginella moellendorffii HOM05D006042 ORTHO05D007658 3.4e-15 85.5 78 60.3
AagrBONN_evm.TU.Sc2ySwM_340.223 Anthoceros agrestis HOM05D000513 ORTHO05D003825 1.3e-14 83.6 77 59.7
Mapoly0019s0052 Marchantia polymorpha HOM05D006042 ORTHO05D007658 3.7e-14 82.0 61 67.2
C04p45290 Brassica napus HOM05D006042 ORTHO05D007658 1.4e-13 80.1 86 54.7
BolC4t26112H Brassica oleracea HOM05D006042 ORTHO05D007658 4.1e-13 78.6 83 55.4
BcaC02g09662 Brassica carinata HOM05D006042 ORTHO05D007658 9.2e-13 77.4 59 67.8
CBR_g44937 Chara braunii HOM05D006042 ORTHO05D007658 4.6e-12 75.1 80 50.0
Peaxi162Scf00751g00624 Petunia axillaris HOM05D006042 ORTHO05D007658 6.0e-12 74.7 52 69.2
Pp3c4_3720 Physcomitrium patens HOM05D006042 ORTHO05D007658 3.0e-11 72.4 83 49.4
MELO3C022088.2 Cucumis melo HOM05D006042 ORTHO05D007658 3.1e-08 62.4 46 71.7
BcaC05g29172 Brassica carinata HOM05D006042 ORTHO05D032368 4.0e-08 62.0 48 66.7
BolC3t18613H Brassica oleracea HOM05D006042 ORTHO05D032368 4.0e-08 62.0 48 66.7
BolC5t30891H Brassica oleracea HOM05D006042 ORTHO05D007658 8.9e-08 60.8 48 66.7
Sabra04G0078300 Salix brachista HOM05D006042 ORTHO05D007658 1.2e-07 60.5 46 69.6
C02p54890 Brassica napus HOM05D006042 ORTHO05D032368 1.5e-07 60.1 48 64.6
Cre16.g665250 Chlamydomonas reinhardtii HOM05D006042 ORTHO05D007658 4.9e-06 55.1 83 41.0


User provided reference genes

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