Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0106200 Salix brachista HOM05D006666 ORTHO05D008276 3.2e-47 191.4 97 100.0
Sabra17G0092500 Salix brachista HOM05D006666 ORTHO05D008276 3.2e-47 191.4 97 100.0
Sabra04G0044800 Salix brachista HOM05D006666 ORTHO05D008276 1.1e-31 139.8 72 100.0
Potri.004G066900 Populus trichocarpa HOM05D006666 ORTHO05D008276 1.4e-23 112.8 63 92.1
Cfa017808 Carpinus fangiana HOM05D006666 ORTHO05D008276 3.9e-21 104.8 63 82.5
Haze_18405 Corylus avellana HOM05D006666 ORTHO05D008276 3.9e-21 104.8 63 82.5
Prupe.5G245400 Prunus persica HOM05D006666 ORTHO05D008276 1.9e-20 102.4 63 81.0
Dinv09758 Davidia involucrata HOM05D006666 ORTHO05D008276 4.3e-20 101.3 63 79.4
PSO063G5885 Papaver somniferum HOM05D006666 ORTHO05D008276 1.6e-19 99.4 63 77.8
PSO782G1773 Papaver somniferum HOM05D006666 ORTHO05D008276 1.6e-19 99.4 63 77.8
RcHm_v2.0_Chr7g0176901 Rosa chinensis HOM05D006666 ORTHO05D008276 1.6e-19 99.4 63 77.8
FAN13G2387 Fragaria x ananassa HOM05D006666 ORTHO05D008276 2.1e-19 99.0 63 77.8
FAN04G1657 Fragaria x ananassa HOM05D006666 ORTHO05D008276 4.8e-19 97.8 63 76.2
PGR083G1370 Punica granatum HOM05D006666 ORTHO05D008276 6.2e-19 97.4 63 76.2
Atru.chr9.23 Acer truncatum HOM05D006666 ORTHO05D008276 8.2e-19 97.1 63 76.2
FvH4_5g18600 Fragaria vesca HOM05D006666 ORTHO05D008276 8.2e-19 97.1 63 76.2
FAN18G1406 Fragaria x ananassa HOM05D006666 ORTHO05D008276 8.2e-19 97.1 63 76.2
CiPaw.16G075700 Carya illinoinensis HOM05D006666 ORTHO05D008276 1.4e-18 96.3 63 79.4
Duzib205G1681 Durio zibethinus HOM05D006666 ORTHO05D008276 1.4e-18 96.3 63 76.2
FAN08G1977 Fragaria x ananassa HOM05D006666 ORTHO05D008276 1.4e-18 96.3 63 74.6
Eucgr.H00663 Eucalyptus grandis HOM05D006666 ORTHO05D008276 2.4e-18 95.5 64 75.0
Ciclev10023646m.g Citrus clementina HOM05D006666 ORTHO05D008276 3.1e-18 95.1 63 74.6
TWI81G0077 Tripterygium wilfordii HOM05D006666 ORTHO05D008276 3.1e-18 95.1 63 73.0
GSVIVG01024243001 Vitis vinifera HOM05D006666 ORTHO05D008276 3.1e-18 95.1 63 81.0
Thhalv10009115m.g Eutrema salsugineum HOM05D006666 ORTHO05D008276 4.0e-18 94.7 65 73.8
MBI06_g22566_MAGBIO Magnolia biondii HOM05D006666 ORTHO05D008276 4.0e-18 94.7 63 74.6
TAR629G2781 Trochodendron aralioides HOM05D006666 ORTHO05D008276 4.0e-18 94.7 63 81.0
COL.COLO4_25502 Corchorus olitorius HOM05D006666 ORTHO05D008276 5.3e-18 94.4 61 77.0
Actinidia02653 Actinidia chinensis HOM05D006666 ORTHO05D008276 1.2e-17 93.2 63 74.6
CSS0032824 Camellia sinensis var. sinensis HOM05D006666 ORTHO05D008276 1.2e-17 93.2 64 76.6
AUR62037011 Chenopodium quinoa HOM05D006666 ORTHO05D008276 1.5e-17 92.8 63 73.0
vmacro17828 Vaccinium macrocarpon HOM05D006666 ORTHO05D008276 1.5e-17 92.8 63 74.6
Hund06740 Selenicereus undatus HOM05D006666 ORTHO05D008276 2.6e-17 92.0 63 73.0
Ah.15g090740 Amaranthus hybridus HOM05D006666 ORTHO05D008276 4.5e-17 91.3 64 71.9
MD06G1241100 Malus domestica HOM05D006666 ORTHO05D008276 4.5e-17 91.3 65 70.8
Aa31sc45G80 Aethionema arabicum HOM05D006666 ORTHO05D008276 5.8e-17 90.9 63 71.4
ATR0124G047 Amborella trichopoda HOM05D006666 ORTHO05D008276 5.8e-17 90.9 63 71.4
AL1G41680 Arabidopsis lyrata HOM05D006666 ORTHO05D008276 5.8e-17 90.9 64 70.3
Sp1g24340 Schrenkiella parvula HOM05D006666 ORTHO05D008276 5.8e-17 90.9 64 71.9
BcaC05g26820 Brassica carinata HOM05D006666 ORTHO05D008276 7.6e-17 90.5 65 73.8
C05p26900 Brassica napus HOM05D006666 ORTHO05D008276 7.6e-17 90.5 65 73.8
BolC5t31408H Brassica oleracea HOM05D006666 ORTHO05D008276 7.6e-17 90.5 65 73.8
ECA233G5286 Erigeron canadensis HOM05D006666 ORTHO05D008276 7.6e-17 90.5 63 76.2
BraA07t28933Z Brassica rapa HOM05D006666 ORTHO05D008276 1.0e-16 90.1 64 70.3
Rhsim08G0006200 Rhododendron simsii HOM05D006666 ORTHO05D008276 1.0e-16 90.1 63 74.6
AT1G28150 Arabidopsis thaliana HOM05D006666 ORTHO05D008276 1.3e-16 89.7 64 70.3
EL10Ac7g16891 Beta vulgaris HOM05D006666 ORTHO05D008276 1.3e-16 89.7 63 69.8
BcaC06g35338 Brassica carinata HOM05D006666 ORTHO05D008276 1.3e-16 89.7 64 70.3
C07p17240 Brassica napus HOM05D006666 ORTHO05D008276 1.3e-16 89.7 64 70.3
BolC7t42228H Brassica oleracea HOM05D006666 ORTHO05D008276 1.3e-16 89.7 64 70.3
CARHR027620 Cardamine hirsuta HOM05D006666 ORTHO05D008276 1.3e-16 89.7 64 70.3
AUR62006207 Chenopodium quinoa HOM05D006666 ORTHO05D008276 1.3e-16 89.7 63 71.4
MD14G1247300 Malus domestica HOM05D006666 ORTHO05D008276 1.3e-16 89.7 63 73.0
QL10p036089 Quercus lobata HOM05D006666 ORTHO05D008276 2.2e-16 89.0 61 78.7
A07p11450 Brassica napus HOM05D006666 ORTHO05D008276 3.8e-16 88.2 64 70.3
Gohir.A07G062700 Gossypium hirsutum HOM05D006666 ORTHO05D008276 3.8e-16 88.2 63 71.4
Gorai.001G070900 Gossypium raimondii HOM05D006666 ORTHO05D008276 3.8e-16 88.2 63 71.4
QL10p036477 Quercus lobata HOM05D006666 ORTHO05D008276 3.8e-16 88.2 61 77.0
BraA09t39302Z Brassica rapa HOM05D006666 ORTHO05D008276 4.9e-16 87.8 65 72.3
Sopen03g029740 Solanum pennellii HOM05D006666 ORTHO05D008276 4.9e-16 87.8 63 69.8
MSTRG.11567 Avicennia marina HOM05D006666 ORTHO05D008276 6.5e-16 87.4 63 68.3
BcaB03g13950 Brassica carinata HOM05D006666 ORTHO05D008276 6.5e-16 87.4 64 70.3
THA.LOC104812606 Tarenaya hassleriana HOM05D006666 ORTHO05D008276 6.5e-16 87.4 64 70.3
DCAR_011403 Daucus carota HOM05D006666 ORTHO05D008276 8.4e-16 87.0 63 68.3
Manes.02G219900 Manihot esculenta HOM05D006666 ORTHO05D008276 8.4e-16 87.0 63 71.4
Nn4g25066 Nelumbo nucifera HOM05D006666 ORTHO05D008276 8.4e-16 87.0 60 71.7
VMungo0720G1342 Vigna mungo HOM05D006666 ORTHO05D008276 8.4e-16 87.0 63 71.4
A09p37900 Brassica napus HOM05D006666 ORTHO05D008276 1.4e-15 86.3 65 70.8
CDE06G1954 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 1.4e-15 86.3 64 71.9
Ca_09926_v3 Cicer arietinum L. HOM05D006666 ORTHO05D008276 1.4e-15 86.3 63 71.4
PGSC0003DMG400015210 Solanum tuberosum HOM05D006666 ORTHO05D008276 1.9e-15 85.9 63 71.4
CAN.G861.22 Capsicum annuum HOM05D006666 ORTHO05D008276 2.5e-15 85.5 64 70.3
Nitab4.5_0009307g0050 Nicotiana tabacum HOM05D006666 ORTHO05D008276 2.5e-15 85.5 63 71.4
Solyc03g019880.3 Solanum lycopersicum HOM05D006666 ORTHO05D008276 2.5e-15 85.5 63 69.8
Hma1.2p1_0816F.1_g222970 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 3.2e-15 85.1 67 70.1
SalBow5G0154 Salvia bowleyana HOM05D006666 ORTHO05D008276 3.2e-15 85.1 63 68.3
Carub.0001s2658 Capsella rubella HOM05D006666 ORTHO05D008276 4.2e-15 84.7 64 67.2
Gohir.D07G067300 Gossypium hirsutum HOM05D006666 ORTHO05D008276 4.2e-15 84.7 63 69.8
Thecc.03G072200 Theobroma cacao HOM05D006666 ORTHO05D008276 4.2e-15 84.7 63 68.3
Glyma.10G174200 Glycine max HOM05D006666 ORTHO05D008276 5.5e-15 84.3 63 69.8
CDE04G3444 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 7.1e-15 84.0 65 69.2
Phvul.L006501 Phaseolus vulgaris HOM05D006666 ORTHO05D008276 7.1e-15 84.0 63 71.4
Os04g0528100 Oryza sativa ssp. japonica HOM05D006666 ORTHO05D008276 9.3e-15 83.6 66 68.2
Glyma.20G216200 Glycine max HOM05D006666 ORTHO05D008276 1.6e-14 82.8 63 68.3
HanXRQChr05g0141151 Helianthus annuus HOM05D006666 ORTHO05D008276 1.6e-14 82.8 64 71.9
SGA_v2.0_scaffold25G10726 Striga asiatica HOM05D006666 ORTHO05D008276 1.6e-14 82.8 63 66.7
MELO3C001965.2 Cucumis melo HOM05D006666 ORTHO05D008276 2.7e-14 82.0 63 69.8
Nitab4.5_0008182g0010 Nicotiana tabacum HOM05D006666 ORTHO05D008276 2.7e-14 82.0 63 68.3
Oeu038394.2 Olea europaea HOM05D006666 ORTHO05D008276 2.7e-14 82.0 60 68.3
Lj5g0025802 Lotus japonicus HOM05D006666 ORTHO05D008276 3.5e-14 81.6 63 68.3
arahy.Tifrunner.gnm1.ann1.UGS5Z8 Arachis hypogaea HOM05D006666 ORTHO05D008276 4.6e-14 81.3 60 68.3
Cc00_g07700 Coffea canephora HOM05D006666 ORTHO05D008276 6.0e-14 80.9 63 65.1
TPR.G8870 Trifolium pratense HOM05D006666 ORTHO05D008276 7.9e-14 80.5 63 68.3
SalBow1G4610 Salvia bowleyana HOM05D006666 ORTHO05D008276 1.0e-13 80.1 56 67.9
Sc10g0008660 Simmondsia chinensis HOM05D006666 ORTHO05D008276 1.0e-13 80.1 63 65.1
unitig_749.g13724 Utricularia gibba HOM05D006666 ORTHO05D008276 1.0e-13 80.1 63 63.5
Medtr1g077550 Medicago truncatula HOM05D006666 ORTHO05D008276 1.3e-13 79.7 63 68.3
Sed0024015 Sechium edule HOM05D006666 ORTHO05D008276 1.3e-13 79.7 63 68.3
Lalb_Chr21g0311701 Lupinus albus HOM05D006666 ORTHO05D008276 1.8e-13 79.3 63 65.1
Peaxi162Scf00171g00030 Petunia axillaris HOM05D006666 ORTHO05D008276 3.0e-13 78.6 63 65.1
ClCG04G012450 Citrullus lanatus HOM05D006666 ORTHO05D008276 5.1e-13 77.8 63 66.7
Migut.O00284 Erythranthe guttata HOM05D006666 ORTHO05D008276 6.7e-13 77.4 65 64.6
Psat6g054440 Pisum sativum HOM05D006666 ORTHO05D008276 1.1e-12 76.6 67 62.7
COL.COLO4_37022 Corchorus olitorius HOM05D006666 ORTHO05D008276 1.5e-12 76.3 52 75.0
SEGI_19522 Sequoiadendron giganteum HOM05D006666 ORTHO05D008276 1.9e-12 75.9 80 56.2
HPP92_021068 Vanilla planifolia HOM05D006666 ORTHO05D008276 1.9e-12 75.9 85 54.1
Lsat_1_v5_gn_8_1660 Lactuca sativa HOM05D006666 ORTHO05D008276 3.3e-12 75.1 66 59.1
Hma1.2p1_0816F.1_g222980 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 7.4e-12 73.9 59 69.5
CsaV3_1G005250 Cucumis sativus L. HOM05D006666 ORTHO05D008276 6.3e-11 70.9 60 58.3
Pp3c19_21970 Physcomitrium patens HOM05D006666 ORTHO05D008276 1.8e-10 69.3 63 55.6
Mapoly0096s0047 Marchantia polymorpha HOM05D006666 ORTHO05D008276 4.1e-10 68.2 60 55.0
AagrBONN_evm.TU.Sc2ySwM_344.686 Anthoceros agrestis HOM05D006666 ORTHO05D008276 5.3e-10 67.8 58 55.2
Aqoxy3G04334 Aquilegia oxysepala HOM05D006666 ORTHO05D008276 3.4e-09 65.1 63 57.1
SMO143G0007 Selaginella moellendorffii HOM05D006666 ORTHO05D008276 5.5e-07 57.8 63 44.4
COL.COLO4_36658 Corchorus olitorius HOM05D006666 ORTHO05D008276 9.3e-07 57.0 53 62.3
MCO08G267 Micromonas commoda HOM05D006666 ORTHO05D008276 2.7e-06 55.5 43 55.8
PRCOL_00004364 Prasinoderma coloniale HOM05D006666 ORTHO05D008276 6.1e-06 54.3 41 53.7


User provided reference genes

Program Settings