Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra17G0081900 Salix brachista HOM05D006599 ORTHO05D008304 2.2e-148 528.9 250 100.0
Potri.017G092800 Populus trichocarpa HOM05D006599 ORTHO05D008304 2.5e-136 488.8 250 92.8
Potri.004G119500 Populus trichocarpa HOM05D006599 ORTHO05D008304 2.5e-128 462.2 250 86.8
Sabra04G0069000 Salix brachista HOM05D006599 ORTHO05D008304 2.0e-125 452.6 250 85.2
QL02p067958 Quercus lobata HOM05D006599 ORTHO05D008304 7.3e-120 434.1 249 79.9
TWI34G0408 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 2.8e-119 432.2 250 78.4
Manes.02G054000 Manihot esculenta HOM05D006599 ORTHO05D008304 1.8e-118 429.5 250 80.0
Thecc.04G093300 Theobroma cacao HOM05D006599 ORTHO05D008304 2.3e-118 429.1 250 79.2
COL.COLO4_21402 Corchorus olitorius HOM05D006599 ORTHO05D008304 1.2e-117 426.8 250 78.4
CSS0025230 Camellia sinensis var. sinensis HOM05D006599 ORTHO05D008304 4.4e-117 424.9 250 78.0
Gohir.A11G072300 Gossypium hirsutum HOM05D006599 ORTHO05D008304 2.9e-116 422.2 250 78.0
Duzib147G0316 Durio zibethinus HOM05D006599 ORTHO05D008304 4.9e-116 421.4 250 77.6
Gohir.D11G076400 Gossypium hirsutum HOM05D006599 ORTHO05D008304 1.1e-115 420.2 250 77.6
Gorai.007G082000 Gossypium raimondii HOM05D006599 ORTHO05D008304 1.1e-115 420.2 250 77.6
Cfa007654 Carpinus fangiana HOM05D006599 ORTHO05D008304 1.4e-115 419.9 250 76.4
Atru.chr8.423 Acer truncatum HOM05D006599 ORTHO05D008304 1.6e-114 416.4 250 76.8
TWI32G0394 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 5.9e-114 414.5 250 75.6
Nn3g17418 Nelumbo nucifera HOM05D006599 ORTHO05D008304 1.7e-113 412.9 250 73.2
GSVIVG01032932001 Vitis vinifera HOM05D006599 ORTHO05D008304 1.7e-113 412.9 250 76.8
TAR629G1530 Trochodendron aralioides HOM05D006599 ORTHO05D008304 3.9e-113 411.8 248 73.4
FvH4_6g47020 Fragaria vesca HOM05D006599 ORTHO05D008304 1.5e-112 409.8 250 74.4
FAN14G4927 Fragaria x ananassa HOM05D006599 ORTHO05D008304 1.5e-112 409.8 250 74.4
FAN09G1977 Fragaria x ananassa HOM05D006599 ORTHO05D008304 1.2e-111 406.8 250 74.0
FAN02G1129 Fragaria x ananassa HOM05D006599 ORTHO05D008304 2.8e-111 405.6 250 74.4
Nn4g23391 Nelumbo nucifera HOM05D006599 ORTHO05D008304 8.0e-111 404.1 250 72.8
RcHm_v2.0_Chr2g0166081 Rosa chinensis HOM05D006599 ORTHO05D008304 2.3e-110 402.5 250 74.4
Prupe.3G256500 Prunus persica HOM05D006599 ORTHO05D008304 6.8e-110 401.0 250 73.2
DCAR_025424 Daucus carota HOM05D006599 ORTHO05D008304 8.9e-110 400.6 250 74.0
Gohir.D09G009200 Gossypium hirsutum HOM05D006599 ORTHO05D008304 4.4e-109 398.3 246 74.8
Hma1.2p1_0481F.1_g162060 Hydrangea macrophylla HOM05D006599 ORTHO05D008304 5.8e-109 397.9 251 73.3
Gorai.006G010900 Gossypium raimondii HOM05D006599 ORTHO05D008304 1.7e-108 396.4 246 74.4
ClCG07G007400 Citrullus lanatus HOM05D006599 ORTHO05D008304 2.9e-108 395.6 250 72.8
CiPaw.03G089500 Carya illinoinensis HOM05D006599 ORTHO05D008304 3.7e-108 395.2 250 74.0
Nitab4.5_0000565g0260 Nicotiana tabacum HOM05D006599 ORTHO05D008304 3.7e-108 395.2 251 73.7
Gohir.A09G010100 Gossypium hirsutum HOM05D006599 ORTHO05D008304 6.4e-108 394.4 246 74.8
Nitab4.5_0010051g0050 Nicotiana tabacum HOM05D006599 ORTHO05D008304 2.4e-107 392.5 251 72.9
Cc07_g04100 Coffea canephora HOM05D006599 ORTHO05D008304 1.2e-106 390.2 247 74.1
MELO3C013909.2 Cucumis melo HOM05D006599 ORTHO05D008304 1.2e-106 390.2 250 71.6
Sc14g0006220 Simmondsia chinensis HOM05D006599 ORTHO05D008304 2.7e-106 389.0 250 71.6
CsaV3_3G002390 Cucumis sativus L. HOM05D006599 ORTHO05D008304 6.0e-106 387.9 250 72.0
Peaxi162Scf00166g00058 Petunia axillaris HOM05D006599 ORTHO05D008304 7.8e-106 387.5 251 71.3
arahy.Tifrunner.gnm1.ann1.CT2P3Y Arachis hypogaea HOM05D006599 ORTHO05D008304 1.0e-105 387.1 252 71.0
arahy.Tifrunner.gnm1.ann1.24WTBT Arachis hypogaea HOM05D006599 ORTHO05D008304 1.7e-105 386.3 252 70.6
MSTRG.23889 Avicennia marina HOM05D006599 ORTHO05D008304 1.7e-105 386.3 250 71.6
Migut.H00636 Erythranthe guttata HOM05D006599 ORTHO05D008304 8.6e-105 384.0 250 68.8
CAN.G206.218 Capsicum annuum HOM05D006599 ORTHO05D008304 1.1e-104 383.6 251 70.9
Solyc02g088730.2 Solanum lycopersicum HOM05D006599 ORTHO05D008304 1.5e-104 383.3 251 70.9
Ca_04338_v3 Cicer arietinum L. HOM05D006599 ORTHO05D008304 1.9e-104 382.9 252 68.7
Lalb_Chr17g0337021 Lupinus albus HOM05D006599 ORTHO05D008304 3.3e-104 382.1 252 69.8
Lsat_1_v5_gn_3_98261 Lactuca sativa HOM05D006599 ORTHO05D008304 4.3e-104 381.7 249 68.7
Sopen02g033440 Solanum pennellii HOM05D006599 ORTHO05D008304 5.6e-104 381.3 251 70.5
Psat3g201440 Pisum sativum HOM05D006599 ORTHO05D008304 7.3e-104 380.9 252 66.7
PGSC0003DMG400001449 Solanum tuberosum HOM05D006599 ORTHO05D008304 7.3e-104 380.9 251 70.1
PGR083G1582 Punica granatum HOM05D006599 ORTHO05D008304 9.5e-104 380.6 250 69.6
CANSAT64G1926 Cannabis sativa HOM05D006599 ORTHO05D008304 3.6e-103 378.6 250 70.0
Sed0027615 Sechium edule HOM05D006599 ORTHO05D008304 3.6e-103 378.6 250 68.8
Medtr7g013160 Medicago truncatula HOM05D006599 ORTHO05D008304 6.2e-103 377.9 252 67.1
Rhsim08G0074600 Rhododendron simsii HOM05D006599 ORTHO05D008304 6.2e-103 377.9 246 70.7
MD09G1064500 Malus domestica HOM05D006599 ORTHO05D008304 8.1e-103 377.5 245 71.4
Thecc.04G093200 Theobroma cacao HOM05D006599 ORTHO05D008304 8.9e-102 374.0 250 71.6
Oeu047780.1 Olea europaea HOM05D006599 ORTHO05D008304 3.4e-101 372.1 250 70.0
Manes.01G097300 Manihot esculenta HOM05D006599 ORTHO05D008304 4.4e-101 371.7 228 75.9
AUR62029230 Chenopodium quinoa HOM05D006599 ORTHO05D008304 5.8e-101 371.3 245 69.4
Lj1g0001712 Lotus japonicus HOM05D006599 ORTHO05D008304 5.8e-101 371.3 252 67.1
Glyma.18G265500 Glycine max HOM05D006599 ORTHO05D008304 7.5e-101 370.9 252 67.1
Eucgr.J01379 Eucalyptus grandis HOM05D006599 ORTHO05D008304 1.3e-100 370.2 250 67.2
Aqoxy3G00501 Aquilegia oxysepala HOM05D006599 ORTHO05D008304 1.7e-100 369.8 250 67.6
AUR62022778 Chenopodium quinoa HOM05D006599 ORTHO05D008304 2.2e-100 369.4 245 70.6
HanXRQChr17g0546571 Helianthus annuus HOM05D006599 ORTHO05D008304 2.9e-100 369.0 246 68.3
Oeu035439.1 Olea europaea HOM05D006599 ORTHO05D008304 1.4e-99 366.7 250 69.6
PSO017G0459 Papaver somniferum HOM05D006599 ORTHO05D008304 2.4e-99 365.9 250 66.4
THA.LOC104823890 Tarenaya hassleriana HOM05D006599 ORTHO05D008304 4.1e-99 365.2 251 67.7
Phvul.008G034600 Phaseolus vulgaris HOM05D006599 ORTHO05D008304 1.6e-98 363.2 252 65.5
VMungo1383G0637 Vigna mungo HOM05D006599 ORTHO05D008304 2.7e-98 362.5 252 65.1
Ciclev10012597m.g Citrus clementina HOM05D006599 ORTHO05D008304 4.6e-98 361.7 250 70.0
PSO478G2235 Papaver somniferum HOM05D006599 ORTHO05D008304 1.7e-97 359.8 251 64.9
TPR.G33427 Trifolium pratense HOM05D006599 ORTHO05D008304 6.6e-97 357.8 252 65.1
Thhalv10027896m.g Eutrema salsugineum HOM05D006599 ORTHO05D008304 2.1e-95 352.8 248 64.5
ECA232G1145 Erigeron canadensis HOM05D006599 ORTHO05D008304 2.8e-95 352.4 250 65.2
A04p11970 Brassica napus HOM05D006599 ORTHO05D008304 1.1e-94 350.5 248 63.3
C04p45620 Brassica napus HOM05D006599 ORTHO05D008304 1.1e-94 350.5 248 63.3
BolC4t26144H Brassica oleracea HOM05D006599 ORTHO05D008304 1.1e-94 350.5 248 63.3
BraA04t16862Z Brassica rapa HOM05D006599 ORTHO05D008304 1.1e-94 350.5 248 63.3
Aa31LG9G16680 Aethionema arabicum HOM05D006599 ORTHO05D008304 1.4e-94 350.1 248 64.1
BcaC02g09687 Brassica carinata HOM05D006599 ORTHO05D008304 4.0e-94 348.6 248 62.9
HanXRQChr17g0551751 Helianthus annuus HOM05D006599 ORTHO05D008304 5.8e-93 344.7 246 63.4
AL7G51210 Arabidopsis lyrata HOM05D006599 ORTHO05D008304 2.2e-92 342.8 248 62.9
Sp7g02740 Schrenkiella parvula HOM05D006599 ORTHO05D008304 2.2e-92 342.8 248 61.7
BcaB06g27283 Brassica carinata HOM05D006599 ORTHO05D008304 2.9e-92 342.4 248 61.7
CARHR263160 Cardamine hirsuta HOM05D006599 ORTHO05D008304 2.9e-92 342.4 248 62.1
AT5G39250 Arabidopsis thaliana HOM05D006599 ORTHO05D008304 4.9e-92 341.7 249 63.1
Carub.0007s3667 Capsella rubella HOM05D006599 ORTHO05D008304 3.2e-91 339.0 248 62.5
Glyma.08G243300 Glycine max HOM05D006599 ORTHO05D008304 9.2e-91 337.4 262 61.5
ATR0064G081 Amborella trichopoda HOM05D006599 ORTHO05D008304 6.0e-90 334.7 249 61.0
Peaxi162Scf00451g00012 Petunia axillaris HOM05D006599 ORTHO05D008304 1.3e-89 333.6 237 66.2
SGA_v2.0_scaffold52G19170 Striga asiatica HOM05D006599 ORTHO05D008304 2.3e-89 332.8 251 61.8
Haze_14439 Corylus avellana HOM05D006599 ORTHO05D008304 5.1e-89 331.6 200 76.0
CDE10G0620 Ceratophyllum demersum HOM05D006599 ORTHO05D008304 3.3e-88 328.9 240 59.6
unitig_744.g23984 Utricularia gibba HOM05D006599 ORTHO05D008304 1.2e-85 320.5 246 59.3
SHI25645 Sapria himalayana HOM05D006599 ORTHO05D008304 5.1e-81 305.1 249 59.4
Os03g0423000 Oryza sativa ssp. japonica HOM05D006599 ORTHO05D008304 6.2e-79 298.1 246 56.5
HPP92_009527 Vanilla planifolia HOM05D006599 ORTHO05D008304 6.2e-79 298.1 247 58.3
HPP92_009554 Vanilla planifolia HOM05D006599 ORTHO05D008304 1.1e-78 297.4 250 57.6
Zm00001eb020180 Zea mays HOM05D006599 ORTHO05D008304 2.4e-78 296.2 247 56.7
Pp3c13_10960 Physcomitrium patens HOM05D006599 ORTHO05D008304 2.6e-69 266.2 251 50.2
FAN05G2816 Fragaria x ananassa HOM05D006599 ORTHO05D008304 2.7e-66 256.1 154 72.7
SMO347G0158 Selaginella moellendorffii HOM05D006599 ORTHO05D008304 8.1e-63 244.6 267 46.1
Mapoly0038s0100 Marchantia polymorpha HOM05D006599 ORTHO05D008304 2.7e-58 229.6 253 43.5
Dinv34953 Davidia involucrata HOM05D006599 ORTHO05D008304 4.3e-56 222.2 134 76.9
Peaxi162Scf00451g00005 Petunia axillaris HOM05D006599 ORTHO05D008304 1.7e-52 210.3 286 44.8
Lsat_1_v5_gn_7_2780 Lactuca sativa HOM05D006599 ORTHO05D008304 4.6e-50 202.2 259 45.2
Lj4E117T1 Lonicera japonica HOM05D006599 ORTHO05D008304 1.3e-47 194.1 111 78.4
Dinv33823 Davidia involucrata HOM05D006599 ORTHO05D008304 3.9e-41 172.6 99 80.8
Lalb_Chr10g0093051 Lupinus albus HOM05D006599 ORTHO05D008304 1.2e-29 134.4 95 64.2
PGSC0003DMG400031200 Solanum tuberosum HOM05D006599 ORTHO05D008304 3.0e-25 119.8 100 63.0
EL10Ac9g22551 Beta vulgaris HOM05D006599 ORTHO05D008304 2.7e-21 106.7 72 61.1
Lalb_Chr10g0093041 Lupinus albus HOM05D006599 ORTHO05D008304 2.2e-20 103.6 53 83.0
Peaxi162Scf00270g00422 Petunia axillaris HOM05D006599 ORTHO05D008304 5.0e-20 102.4 161 42.2
MD17G1057800 Malus domestica HOM05D006599 ORTHO05D008304 1.2e-16 91.3 52 75.0
TPR.G10380 Trifolium pratense HOM05D006599 ORTHO05D008304 2.1e-10 70.5 45 66.7
Mapoly0033s0071 Marchantia polymorpha HOM05D006599 ORTHO05D008304 8.8e-09 65.1 114 29.8
Dinv30288 Davidia involucrata HOM05D007529 ORTHO05D007451 3.4e-08 63.2 109 35.8


User provided reference genes

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