Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra17G0065100 Salix brachista HOM05D007214 ORTHO05D008907 1.2e-56 223.0 116 100.0
Potri.017G074100 Populus trichocarpa HOM05D007214 ORTHO05D008907 1.5e-40 169.5 97 91.8
Potri.001G350100 Populus trichocarpa HOM05D007214 ORTHO05D008907 7.0e-33 144.1 97 76.3
Sabra07G0063000 Salix brachista HOM05D007214 ORTHO05D008907 2.7e-29 132.1 116 65.5
Sabra16G0229500 Salix brachista HOM05D007214 ORTHO05D008907 2.6e-27 125.6 97 69.1
FAN09G3859 Fragaria x ananassa HOM05D007214 ORTHO05D008907 4.8e-26 121.3 97 60.8
CiPaw.04G066400 Carya illinoinensis HOM05D007214 ORTHO05D008907 7.0e-25 117.5 97 64.9
CANSAT64G0721 Cannabis sativa HOM05D007214 ORTHO05D008907 2.6e-24 115.5 97 58.8
Sc11g0006840 Simmondsia chinensis HOM05D007214 ORTHO05D008907 3.5e-24 115.2 100 60.0
PSO063G2579 Papaver somniferum HOM05D007214 ORTHO05D008907 4.5e-24 114.8 97 60.8
Nitab4.5_0001239g0030 Nicotiana tabacum HOM05D007214 ORTHO05D008907 1.0e-23 113.6 97 60.8
Ciclev10012639m.g Citrus clementina HOM05D007214 ORTHO05D008907 6.5e-23 110.9 97 57.7
Peaxi162Scf00129g00734 Petunia axillaris HOM05D007214 ORTHO05D008907 6.1e-21 104.4 97 52.6
AUR62030556 Chenopodium quinoa HOM05D007214 ORTHO05D008907 1.8e-20 102.8 96 58.3
Manes.17G117200 Manihot esculenta HOM05D007214 ORTHO05D008907 3.0e-20 102.1 97 54.6
LjContig00155g0009682 Lotus japonicus HOM05D007214 ORTHO05D008907 9.7e-19 97.1 97 51.5
CSS0043780 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 1.3e-18 96.7 75 64.0
Glyma.04G176300 Glycine max HOM05D007214 ORTHO05D008907 2.8e-18 95.5 97 50.5
Ca_08472_v3 Cicer arietinum L. HOM05D007214 ORTHO05D008907 4.8e-18 94.7 97 53.6
Rhsim10G0029100 Rhododendron simsii HOM05D007214 ORTHO05D008907 1.4e-17 93.2 75 60.0
Aqoxy3G00863 Aquilegia oxysepala HOM05D007214 ORTHO05D008907 1.8e-17 92.8 95 53.7
AUR62018331 Chenopodium quinoa HOM05D007214 ORTHO05D008907 1.2e-16 90.1 97 51.5
Lalb_Chr10g0093331 Lupinus albus HOM05D007214 ORTHO05D008907 1.6e-16 89.7 102 50.0
Glyma.06G189000 Glycine max HOM05D007214 ORTHO05D008907 2.0e-16 89.4 114 42.1
Phvul.008G153000 Phaseolus vulgaris HOM05D007214 ORTHO05D008907 1.7e-15 86.3 97 47.4
DCAR_011179 Daucus carota HOM05D007214 ORTHO05D008907 8.5e-15 84.0 90 50.0
FAN02G1556 Fragaria x ananassa HOM05D007214 ORTHO05D008907 8.5e-15 84.0 97 48.5
Psat3g038600 Pisum sativum HOM05D007214 ORTHO05D008907 5.5e-14 81.3 97 47.4
Cpa.g.sc14.68 Carica papaya HOM05D007214 ORTHO05D008907 1.2e-13 80.1 98 49.0
arahy.Tifrunner.gnm1.ann1.QRE12D Arachis hypogaea HOM05D007214 ORTHO05D008907 2.1e-13 79.3 97 46.4
arahy.Tifrunner.gnm1.ann1.X6PLX1 Arachis hypogaea HOM05D007214 ORTHO05D008907 2.1e-13 79.3 97 46.4
TPR.G30823 Trifolium pratense HOM05D007214 ORTHO05D008907 8.0e-13 77.4 97 48.5
Sabra07G0062600 Salix brachista HOM05D004393 ORTHO05D004897 3.0e-12 75.5 35 100.0
MELO3C030968.2 Cucumis melo HOM05D007214 ORTHO05D008907 5.2e-12 74.7 72 48.6
MD17G1043300 Malus domestica HOM05D007214 ORTHO05D008907 1.2e-11 73.6 56 66.1
Zm00001eb280040 Zea mays HOM05D007214 ORTHO05D008907 1.2e-11 73.6 94 39.4
MBI15_g38192_MAGBIO Magnolia biondii HOM05D007214 ORTHO05D008907 2.0e-11 72.8 82 48.8
Solyc02g087420.3 Solanum lycopersicum HOM05D007214 ORTHO05D008907 4.4e-11 71.6 97 45.4
Sopen02g032170 Solanum pennellii HOM05D007214 ORTHO05D008907 4.4e-11 71.6 97 45.4
Ah.12g065280 Amaranthus hybridus HOM05D007214 ORTHO05D008907 9.8e-11 70.5 79 53.2
Nitab4.5_0001239g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 9.8e-11 70.5 97 46.4
CSS0027558 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 1.7e-10 69.7 75 48.0
Nitab4.5_0002265g0110 Nicotiana tabacum HOM05D005549 ORTHO05D006771 1.7e-10 69.7 79 51.9
Medtr7g034275 Medicago truncatula HOM05D007214 ORTHO05D008907 2.8e-10 68.9 97 43.3
A06p40570 Brassica napus HOM05D007214 ORTHO05D008907 4.8e-10 68.2 99 40.4
Rhsim12G0075800 Rhododendron simsii HOM05D000660 ORTHO05D008907 1.1e-09 67.0 76 50.0
CDE02G1584 Ceratophyllum demersum HOM05D007214 ORTHO05D008907 1.4e-09 66.6 103 32.0
Duzib187G0634 Durio zibethinus HOM05D007214 ORTHO05D008907 2.4e-09 65.9 97 40.2
Manes.17G117300 Manihot esculenta HOM05D007214 ORTHO05D008907 1.2e-08 63.5 53 64.2
Sp2g17170 Schrenkiella parvula HOM05D007214 ORTHO05D008907 2.0e-08 62.8 102 35.3
TAR629G0039 Trochodendron aralioides HOM05D000068 ORTHO05D008907 7.7e-08 60.8 55 54.5
C07p37400 Brassica napus HOM05D007214 ORTHO05D008907 1.0e-07 60.5 99 37.4
Eucgr.J02159 Eucalyptus grandis HOM05D007214 ORTHO05D008907 1.0e-07 60.5 97 37.1
SGA_v2.0_scaffold135G34803 Striga asiatica HOM05D007214 ORTHO05D008907 1.0e-07 60.5 93 38.7
HPP92_010494 Vanilla planifolia HOM05D007214 ORTHO05D008907 1.0e-07 60.5 94 38.3
CARHR292610 Cardamine hirsuta HOM05D007214 ORTHO05D008907 1.3e-07 60.1 97 36.1
FAN14G2712 Fragaria x ananassa HOM05D007214 ORTHO05D008907 5.0e-07 58.2 97 37.1
BcaC06g33744 Brassica carinata HOM05D007214 ORTHO05D008907 6.6e-07 57.8 98 35.7
BolC7t44250H Brassica oleracea HOM05D007214 ORTHO05D008907 6.6e-07 57.8 99 35.4
A06p40600 Brassica napus HOM05D007214 ORTHO05D008907 8.6e-07 57.4 99 36.4
BraA06t26979Z Brassica rapa HOM05D007214 ORTHO05D008907 8.6e-07 57.4 99 36.4
RcHm_v2.0_Chr2g0169771 Rosa chinensis HOM05D007214 ORTHO05D008907 3.3e-06 55.5 39 64.1
TAR629G1667 Trochodendron aralioides HOM05D000068 ORTHO05D000084 4.2e-06 55.1 41 63.4


User provided reference genes

Program Settings