Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra17G0051600 Salix brachista HOM05D000003 ORTHO05D000022 9.2e-62 240.0 114 100.0
Sabra17G0024800 Salix brachista HOM05D000003 ORTHO05D000022 5.8e-32 141.0 143 53.8
Sabra17G0024900 Salix brachista HOM05D000003 ORTHO05D000022 1.7e-31 139.4 143 53.1
Sabra17G0024600 Salix brachista HOM05D000003 ORTHO05D000022 1.3e-28 129.8 137 54.0
Sabra17G0024700 Salix brachista HOM05D000003 ORTHO05D000022 3.1e-25 118.6 147 48.3
Sabra01G0106600 Salix brachista HOM05D000003 ORTHO05D000022 4.0e-09 65.1 132 31.1
CSS0016748 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 6.9e-09 64.3 137 29.2
TWI81G0242 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 9.0e-09 63.9 134 32.1
Atru.chr10.897 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-08 63.2 103 37.9
CSS0027105 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.6e-08 62.4 136 30.1
CSS0038037 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.4e-08 62.0 136 30.1
CSS0043443 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.4e-08 62.0 136 30.1
Sabra09G0061300 Salix brachista HOM05D000003 ORTHO05D000022 3.4e-08 62.0 114 33.3
Lj1g0018212 Lotus japonicus HOM05D000003 ORTHO05D000022 4.5e-08 61.6 131 30.5
Atru.chr3.2067 Acer truncatum HOM05D000003 ORTHO05D000022 5.8e-08 61.2 130 29.2
Atru.chr11.82 Acer truncatum HOM05D000003 ORTHO05D000022 7.6e-08 60.8 137 29.9
CSS0023133 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 9.9e-08 60.5 136 30.9
Atru.chr3.2099 Acer truncatum HOM05D000003 ORTHO05D000022 1.3e-07 60.1 135 31.1
CSS0010523 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.7e-07 59.7 136 30.9
CSS0026614 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.7e-07 59.7 136 30.9
CSS0044722 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.7e-07 59.7 136 30.9
Atru.chr3.2393 Acer truncatum HOM05D000003 ORTHO05D000022 2.2e-07 59.3 135 31.1
Atru.chr1.2428 Acer truncatum HOM05D000003 ORTHO05D000004 2.9e-07 58.9 116 30.2
Atru.chr10.81 Acer truncatum HOM05D000003 ORTHO05D000004 3.8e-07 58.5 130 30.0
Thecc.06G025800 Theobroma cacao HOM05D000003 ORTHO05D000022 3.8e-07 58.5 51 45.1
Atru.chr7.668 Acer truncatum HOM05D000003 ORTHO05D000004 4.9e-07 58.2 130 31.5
Thecc.06G023800 Theobroma cacao HOM05D000003 ORTHO05D000006 4.9e-07 58.2 51 45.1
TPR.G21331 Trifolium pratense HOM05D000003 ORTHO05D000022 4.9e-07 58.2 132 27.3
CSS0009370 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.4e-07 57.8 136 28.7
MBI15_g25771_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.4e-07 57.8 116 33.6
TPR.G17895 Trifolium pratense HOM05D000003 ORTHO05D000022 6.4e-07 57.8 132 27.3
Atru.chr6.2848 Acer truncatum HOM05D000003 ORTHO05D000022 1.1e-06 57.0 135 28.9
arahy.Tifrunner.gnm1.ann1.C14R7W Arachis hypogaea HOM05D000003 ORTHO05D000022 1.4e-06 56.6 127 29.1
Atru.chr1.1905 Acer truncatum HOM05D000003 ORTHO05D000022 1.9e-06 56.2 114 33.3
Atru.chr5.2509 Acer truncatum HOM05D000003 ORTHO05D000022 1.9e-06 56.2 83 33.7
Nitab4.5_0007388g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000022 1.9e-06 56.2 139 30.2
Nitab4.5_0007519g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000022 1.9e-06 56.2 139 29.5
Atru.chr13.1101 Acer truncatum HOM05D000003 ORTHO05D000022 2.4e-06 55.8 115 28.7
Solyc07g056380.1 Solanum lycopersicum HOM05D000003 ORTHO05D000022 2.4e-06 55.8 130 31.5
Atru.chr10.857 Acer truncatum HOM05D000003 ORTHO05D000004 3.2e-06 55.5 133 29.3
arahy.Tifrunner.gnm1.ann1.PA7RNP Arachis hypogaea HOM05D000003 ORTHO05D000022 3.2e-06 55.5 127 29.1
CSS0047834 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.2e-06 55.5 134 26.9
COL.COLO4_19293 Corchorus olitorius HOM05D000155 ORTHO05D000022 3.2e-06 55.5 135 27.4
Atru.chr4.29 Acer truncatum HOM05D000003 ORTHO05D000022 4.2e-06 55.1 135 29.6
CSS0029354 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.2e-06 55.1 129 28.7
CSS0033039 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.2e-06 55.1 136 25.7
Atru.chr1.1302 Acer truncatum HOM05D000003 ORTHO05D000004 5.5e-06 54.7 135 28.9
Atru.chr2.1419 Acer truncatum HOM05D000003 ORTHO05D000022 5.5e-06 54.7 133 29.3
CSS0036731 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.5e-06 54.7 136 27.9
Lj2C374T9 Lonicera japonica HOM05D000155 ORTHO05D000022 5.5e-06 54.7 134 25.4
CSS0032736 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.1e-06 54.3 136 27.9
Lj4C70T10 Lonicera japonica HOM05D000003 ORTHO05D000022 7.1e-06 54.3 62 38.7
Nitab4.5_0007164g0040 Nicotiana tabacum HOM05D014268 ORTHO05D014203 7.1e-06 54.3 68 36.8
Sabra07G0074300 Salix brachista HOM05D000609 ORTHO05D000462 7.1e-06 54.3 133 31.6
CSS0049818 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 9.3e-06 53.9 136 30.1


User provided reference genes

Program Settings