Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra17G0038400 Salix brachista HOM05D004356 ORTHO05D005542 6.1e-219 763.8 383 100.0
Sabra17G0043000 Salix brachista HOM05D004356 ORTHO05D005542 6.1e-219 763.8 383 100.0
Sabra17G0037700 Salix brachista HOM05D004356 ORTHO05D005542 5.7e-217 757.3 383 99.0
Potri.017G051500 Populus trichocarpa HOM05D004356 ORTHO05D005542 3.0e-181 638.6 354 91.0
MD00G1136500 Malus domestica HOM05D004356 ORTHO05D005542 7.6e-161 570.9 402 73.4
QL09p016893 Quercus lobata HOM05D004356 ORTHO05D005542 9.9e-161 570.5 408 72.8
COL.COLO4_11966 Corchorus olitorius HOM05D004356 ORTHO05D005542 1.3e-160 570.1 413 70.9
GSVIVG01009120001 Vitis vinifera HOM05D004356 ORTHO05D005542 1.3e-160 570.1 400 73.5
Manes.18G062300 Manihot esculenta HOM05D004356 ORTHO05D005542 6.4e-160 567.8 388 76.5
MD15G1379800 Malus domestica HOM05D004356 ORTHO05D005542 1.1e-159 567.0 402 72.9
TAR381G1323 Trochodendron aralioides HOM05D004356 ORTHO05D005542 1.6e-158 563.1 407 72.2
Atru.chr13.1064 Acer truncatum HOM05D004356 ORTHO05D005542 3.5e-158 562.0 416 71.2
Atru.chr13.1070 Acer truncatum HOM05D004356 ORTHO05D005542 3.5e-158 562.0 416 71.2
Haze_22357 Corylus avellana HOM05D004356 ORTHO05D005542 2.3e-157 559.3 449 67.5
CSS0046210 Camellia sinensis var. sinensis HOM05D004356 ORTHO05D005542 1.9e-156 556.2 412 70.4
Duzib093G1902 Durio zibethinus HOM05D004356 ORTHO05D005542 1.9e-156 556.2 411 69.6
Ciclev10001304m.g Citrus clementina HOM05D004356 ORTHO05D005542 3.3e-156 555.4 429 67.4
RcHm_v2.0_Chr7g0237731 Rosa chinensis HOM05D004356 ORTHO05D005542 5.6e-156 554.7 393 72.3
FAN04G0906 Fragaria x ananassa HOM05D004356 ORTHO05D005542 7.4e-156 554.3 396 72.0
FAN18G3440 Fragaria x ananassa HOM05D004356 ORTHO05D005542 1.3e-155 553.5 396 72.0
FvH4_5g36000 Fragaria vesca HOM05D004356 ORTHO05D005542 1.6e-155 553.1 396 72.0
Actinidia33114 Actinidia chinensis HOM05D004356 ORTHO05D005542 2.1e-155 552.7 410 70.0
Dinv42649 Davidia involucrata HOM05D004356 ORTHO05D005542 3.7e-155 552.0 411 71.3
RcHm_v2.0_Chr1g0327751 Rosa chinensis HOM05D004356 ORTHO05D005542 1.8e-154 549.7 393 72.0
vmacro04684 Vaccinium macrocarpon HOM05D004356 ORTHO05D005542 9.0e-154 547.4 426 67.8
THA.LOC104816870 Tarenaya hassleriana HOM05D004356 ORTHO05D005542 2.6e-153 545.8 414 68.8
Gohir.D05G224800 Gossypium hirsutum HOM05D004356 ORTHO05D005542 3.4e-153 545.4 415 68.2
CANSAT21G1617 Cannabis sativa HOM05D004356 ORTHO05D005542 4.5e-153 545.0 409 69.4
Gohir.A05G222100 Gossypium hirsutum HOM05D004356 ORTHO05D005542 1.0e-152 543.9 417 68.1
Gorai.009G232200 Gossypium raimondii HOM05D004356 ORTHO05D005542 2.9e-152 542.3 415 67.7
FAN08G0112 Fragaria x ananassa HOM05D004356 ORTHO05D005542 3.2e-151 538.9 423 67.4
TWI56G1415 Tripterygium wilfordii HOM05D004356 ORTHO05D005542 4.2e-151 538.5 407 70.5
CsaV3_2G030020 Cucumis sativus L. HOM05D004356 ORTHO05D005542 5.5e-151 538.1 388 70.9
Glyma.14G178900 Glycine max HOM05D004356 ORTHO05D005542 7.1e-151 537.7 411 69.1
MELO3C011060.2 Cucumis melo HOM05D004356 ORTHO05D005542 1.2e-150 537.0 388 70.6
Lsat_1_v5_gn_1_2520 Lactuca sativa HOM05D004356 ORTHO05D005542 2.7e-150 535.8 404 67.8
PGSC0003DMG400001802 Solanum tuberosum HOM05D004356 ORTHO05D005542 3.5e-150 535.4 400 69.2
Nitab4.5_0004523g0040 Nicotiana tabacum HOM05D004356 ORTHO05D005542 4.6e-150 535.0 403 68.5
PGR102G1623 Punica granatum HOM05D004356 ORTHO05D005542 7.9e-150 534.3 390 70.0
Oeu025262.1 Olea europaea HOM05D004356 ORTHO05D005542 1.3e-149 533.5 357 75.1
Nitab4.5_0001788g0020 Nicotiana tabacum HOM05D004356 ORTHO05D005542 3.0e-149 532.3 403 68.2
Sed0016629 Sechium edule HOM05D004356 ORTHO05D005542 3.0e-149 532.3 356 73.9
Medtr5g065270 Medicago truncatula HOM05D004356 ORTHO05D005542 3.9e-149 531.9 407 67.3
Aqoxy3G00172 Aquilegia oxysepala HOM05D004356 ORTHO05D005542 5.1e-149 531.6 395 69.4
Solyc01g081300.4 Solanum lycopersicum HOM05D004356 ORTHO05D005542 5.1e-149 531.6 398 68.1
Lj1g0019049 Lotus japonicus HOM05D004356 ORTHO05D005542 6.7e-149 531.2 404 69.1
Aa31LG8G7830 Aethionema arabicum HOM05D004356 ORTHO05D005542 8.7e-149 530.8 417 67.1
Ca_19032_v3 Cicer arietinum L. HOM05D004356 ORTHO05D005542 1.1e-148 530.4 404 69.8
Glyma.02G211300 Glycine max HOM05D004356 ORTHO05D005542 1.1e-148 530.4 406 68.2
TPR.G30120 Trifolium pratense HOM05D004356 ORTHO05D005542 1.1e-148 530.4 371 71.7
Thhalv10020825m.g Eutrema salsugineum HOM05D004356 ORTHO05D005542 1.9e-148 529.6 417 67.6
arahy.Tifrunner.gnm1.ann1.3Z7WCZ Arachis hypogaea HOM05D004356 ORTHO05D005542 2.5e-148 529.3 389 69.9
A01p33740 Brassica napus HOM05D004356 ORTHO05D005542 3.3e-148 528.9 413 67.6
BolC3t17429H Brassica oleracea HOM05D004356 ORTHO05D005542 3.3e-148 528.9 414 67.6
BraA03t13356Z Brassica rapa HOM05D004356 ORTHO05D005542 3.3e-148 528.9 414 67.9
CiPaw.16G056200 Carya illinoinensis HOM05D004356 ORTHO05D005542 3.3e-148 528.9 355 74.4
Cc10_g15470 Coffea canephora HOM05D004356 ORTHO05D005542 4.3e-148 528.5 411 66.7
CAN.G992.8 Capsicum annuum HOM05D004356 ORTHO05D005542 5.7e-148 528.1 402 67.9
Rhsim07G0209000 Rhododendron simsii HOM05D004356 ORTHO05D005542 5.7e-148 528.1 418 66.7
ECA247G0627 Erigeron canadensis HOM05D004356 ORTHO05D005542 7.4e-148 527.7 402 68.4
TPR.G16206 Trifolium pratense HOM05D004356 ORTHO05D005542 7.4e-148 527.7 409 67.5
AL3G35050 Arabidopsis lyrata HOM05D004356 ORTHO05D005542 9.6e-148 527.3 418 66.0
Cc10_g15440 Coffea canephora HOM05D004356 ORTHO05D005542 9.6e-148 527.3 411 67.2
HanXRQChr02g0040341 Helianthus annuus HOM05D004356 ORTHO05D005542 9.6e-148 527.3 406 67.0
Psat2g068800 Pisum sativum HOM05D004356 ORTHO05D005542 9.6e-148 527.3 403 69.0
CARHR096940 Cardamine hirsuta HOM05D004356 ORTHO05D005542 2.1e-147 526.2 413 67.1
A03p42020 Brassica napus HOM05D004356 ORTHO05D005542 3.7e-147 525.4 419 67.3
BraA01t03487Z Brassica rapa HOM05D004356 ORTHO05D005542 3.7e-147 525.4 413 67.1
BcaB04g19136 Brassica carinata HOM05D004356 ORTHO05D005542 1.4e-146 523.5 413 66.8
CSS0005507 Camellia sinensis var. sinensis HOM05D004356 ORTHO05D005542 1.4e-146 523.5 412 67.5
Lalb_Chr10g0102631 Lupinus albus HOM05D004356 ORTHO05D005542 1.4e-146 523.5 398 70.1
Phvul.008G178500 Phaseolus vulgaris HOM05D004356 ORTHO05D005542 1.4e-146 523.5 404 68.8
Aqoxy1G00182 Aquilegia oxysepala HOM05D004356 ORTHO05D005542 1.8e-146 523.1 357 72.0
MSTRG.16368 Avicennia marina HOM05D004356 ORTHO05D005542 1.8e-146 523.1 393 68.4
Sopen01g032880 Solanum pennellii HOM05D004356 ORTHO05D005542 1.8e-146 523.1 358 72.3
arahy.Tifrunner.gnm1.ann1.QY7301 Arachis hypogaea HOM05D004356 ORTHO05D005542 3.1e-146 522.3 408 66.9
SGA_v2.0_scaffold175G39331 Striga asiatica HOM05D004356 ORTHO05D005542 3.1e-146 522.3 348 74.4
PSO675G5075 Papaver somniferum HOM05D004356 ORTHO05D005542 4.1e-146 521.9 360 72.2
Peaxi162Scf00592g00454 Petunia axillaris HOM05D004356 ORTHO05D005542 4.1e-146 521.9 423 65.0
arahy.Tifrunner.gnm1.ann1.JC6ZCB Arachis hypogaea HOM05D004356 ORTHO05D005542 6.9e-146 521.2 401 67.1
PSO675G0521 Papaver somniferum HOM05D004356 ORTHO05D005542 6.9e-146 521.2 340 73.8
AT3G21110 Arabidopsis thaliana HOM05D004356 ORTHO05D005542 2.0e-145 519.6 416 66.6
Migut.M02007 Erythranthe guttata HOM05D004356 ORTHO05D005542 2.6e-145 519.2 406 66.7
SalBow8G3481 Salvia bowleyana HOM05D004356 ORTHO05D005542 2.6e-145 519.2 404 68.1
VMungo0647G1889 Vigna mungo HOM05D004356 ORTHO05D005542 2.6e-145 519.2 403 68.0
Eucgr.F00397 Eucalyptus grandis HOM05D004356 ORTHO05D005542 3.4e-145 518.8 375 70.4
PSO017G1942 Papaver somniferum HOM05D004356 ORTHO05D005542 4.5e-145 518.5 390 67.4
Carub.0003s2101 Capsella rubella HOM05D004356 ORTHO05D005542 1.7e-144 516.5 398 67.1
Hund16880 Selenicereus undatus HOM05D004356 ORTHO05D005542 2.9e-144 515.8 371 70.4
Ah.05g170540 Amaranthus hybridus HOM05D004356 ORTHO05D005542 3.8e-144 515.4 349 73.4
Duzib106G0787 Durio zibethinus HOM05D004356 ORTHO05D005542 8.4e-144 514.2 409 67.0
arahy.Tifrunner.gnm1.ann1.VLAW7V Arachis hypogaea HOM05D004356 ORTHO05D005542 1.1e-143 513.8 349 73.1
Dinv44826 Davidia involucrata HOM05D004356 ORTHO05D005542 1.9e-143 513.1 367 73.0
AUR62027839 Chenopodium quinoa HOM05D004356 ORTHO05D005542 3.2e-143 512.3 407 66.3
Cfa013712 Carpinus fangiana HOM05D004356 ORTHO05D005542 9.3e-143 510.8 412 67.7
Cc07_g18320 Coffea canephora HOM05D004356 ORTHO05D005542 9.3e-143 510.8 358 70.1
Carub.0003s2106 Capsella rubella HOM05D004356 ORTHO05D005542 1.0e-141 507.3 354 71.5
Lj1g0006758 Lotus japonicus HOM05D004356 ORTHO05D005542 3.0e-141 505.8 394 68.0
BcaB04g20611 Brassica carinata HOM05D004356 ORTHO05D005542 5.1e-141 505.0 412 65.3
EL10Ac9g21432 Beta vulgaris HOM05D000128 ORTHO05D005542 6.7e-141 504.6 359 71.0
BcaC01g03528 Brassica carinata HOM05D004356 ORTHO05D004900 1.1e-140 503.8 389 67.6
unitig_37.g12048 Utricularia gibba HOM05D004356 ORTHO05D005542 1.5e-140 503.4 338 71.0
ATR0022G038 Amborella trichopoda HOM05D004356 ORTHO05D005542 1.2e-137 493.8 395 63.0
CDE04G0095 Ceratophyllum demersum HOM05D004356 ORTHO05D005542 3.4e-137 492.3 368 66.8
Os09g0467100 Oryza sativa ssp. japonica HOM05D004356 ORTHO05D005542 1.1e-135 487.3 337 70.3
Thecc.08G065800 Theobroma cacao HOM05D004356 ORTHO05D005542 1.1e-135 487.3 305 78.7
C03p51440 Brassica napus HOM05D004356 ORTHO05D005542 5.5e-135 485.0 416 63.2
HPP92_011797 Vanilla planifolia HOM05D004356 ORTHO05D005542 1.2e-134 483.8 384 63.0
Sp3g19060 Schrenkiella parvula HOM05D004356 ORTHO05D005542 4.6e-134 481.9 417 62.1
BolC1t04259H Brassica oleracea HOM05D004356 ORTHO05D005542 6.7e-133 478.0 368 67.1
Zm00001eb284720 Zea mays HOM05D004356 ORTHO05D005542 1.1e-132 477.2 385 62.6
AUR62018997 Chenopodium quinoa HOM05D004356 ORTHO05D005542 1.5e-132 476.9 372 66.9
C01p43120 Brassica napus HOM05D004356 ORTHO05D005542 5.7e-132 474.9 368 66.8
Carub.0043s0006 Capsella rubella HOM05D004356 ORTHO05D005542 1.7e-131 473.4 399 64.7
Sc23g0000510 Simmondsia chinensis HOM05D004356 ORTHO05D005542 2.2e-131 473.0 340 70.0
SEGI_03509 Sequoiadendron giganteum HOM05D004356 ORTHO05D005542 2.8e-131 472.6 366 65.3
Prupe.1G526100 Prunus persica HOM05D004356 ORTHO05D005542 4.5e-129 465.3 290 79.0
Mapoly0044s0034 Marchantia polymorpha HOM05D004356 ORTHO05D005542 1.0e-128 464.2 358 64.8
AagrBONN_evm.TU.Sc2ySwM_344.5470 Anthoceros agrestis HOM05D004356 ORTHO05D005542 2.9e-128 462.6 335 66.0
Carub.0043s0010 Capsella rubella HOM05D004356 ORTHO05D005542 6.5e-128 461.5 375 63.7
Carub.0043s0008 Capsella rubella HOM05D004356 ORTHO05D005542 3.2e-127 459.1 297 74.7
Pp3c23_9790 Physcomitrium patens HOM05D004356 ORTHO05D005542 6.7e-125 451.4 338 65.4
arahy.Tifrunner.gnm1.ann1.1YQ32R Arachis hypogaea HOM05D004356 ORTHO05D005542 1.3e-123 447.2 429 57.8
SMO340G0097 Selaginella moellendorffii HOM05D004356 ORTHO05D005542 7.0e-122 441.4 340 63.8
arahy.Tifrunner.gnm1.ann1.L8UQBM Arachis hypogaea HOM05D004356 ORTHO05D005542 4.4e-116 422.2 396 59.3
CBR_g27760 Chara braunii HOM05D004356 ORTHO05D005542 3.1e-114 416.0 342 60.2
Lj4C732G13 Lonicera japonica HOM05D004356 ORTHO05D005542 4.1e-114 415.6 438 57.3
Gohir.A05G222001 Gossypium hirsutum HOM05D004356 ORTHO05D005542 5.5e-111 405.2 324 64.8
SHI20358 Sapria himalayana HOM05D004356 ORTHO05D005542 2.4e-106 389.8 323 61.3
Cre03.g202113 Chlamydomonas reinhardtii HOM05D004356 ORTHO05D005542 1.0e-101 374.4 333 55.3
CiPaw.16G030800 Carya illinoinensis HOM05D004356 ORTHO05D005542 2.6e-100 369.8 275 68.4
Cpa.g.sc198.38 Carica papaya HOM05D004356 ORTHO05D005542 1.8e-93 347.1 270 66.3
MCO12G379 Micromonas commoda HOM05D004356 ORTHO05D005542 9.2e-90 334.7 328 53.0
PRCOL_00002575 Prasinoderma coloniale HOM05D004356 ORTHO05D005542 3.9e-88 329.3 294 55.4
Nn1g08498 Nelumbo nucifera HOM05D004356 ORTHO05D005542 6.2e-86 322.0 240 68.3
Actinidia29604 Actinidia chinensis HOM05D004356 ORTHO05D005542 1.4e-85 320.9 188 80.9
ClCG00G002050 Citrullus lanatus HOM05D004356 ORTHO05D005542 2.6e-84 316.6 200 76.0
arahy.Tifrunner.gnm1.ann1.PGQR8U Arachis hypogaea HOM05D004356 ORTHO05D005542 2.1e-70 270.4 303 51.5
RcHm_v2.0_Chr3g0491851 Rosa chinensis HOM05D004356 ORTHO05D005542 6.2e-62 242.3 257 52.5
Nn1g08495 Nelumbo nucifera HOM05D004356 ORTHO05D005542 8.4e-59 231.9 164 72.6
ClCG08G011430 Citrullus lanatus HOM05D004356 ORTHO05D005542 1.2e-57 228.0 170 68.8
arahy.Tifrunner.gnm1.ann1.X0GHYT Arachis hypogaea HOM05D004356 ORTHO05D005542 7.3e-55 218.8 239 51.0
Carub.0516s0001 Capsella rubella HOM05D004356 ORTHO05D005542 3.8e-51 206.5 144 69.4
arahy.Tifrunner.gnm1.ann1.HK5GW2 Arachis hypogaea HOM05D004356 ORTHO05D005542 1.1e-50 204.9 262 46.6
arahy.Tifrunner.gnm1.ann1.D1TUAT Arachis hypogaea HOM05D004356 ORTHO05D005542 2.5e-47 193.7 122 77.9
Psat0s4321g0120 Pisum sativum HOM05D004356 ORTHO05D005542 8.1e-46 188.7 117 76.1
arahy.Tifrunner.gnm1.ann1.F3AJY4 Arachis hypogaea HOM05D004356 ORTHO05D005542 1.1e-45 188.3 181 58.6
arahy.Tifrunner.gnm1.ann1.F88CCI Arachis hypogaea HOM05D004356 ORTHO05D005542 1.4e-45 188.0 328 38.4
DCAR_012871 Daucus carota HOM05D004356 ORTHO05D005542 4.0e-45 186.4 313 40.3
arahy.Tifrunner.gnm1.ann1.FASD2W Arachis hypogaea HOM05D004356 ORTHO05D005542 1.4e-42 177.9 181 57.5
arahy.Tifrunner.gnm1.ann1.MUPT6T Arachis hypogaea HOM05D004356 ORTHO05D005542 1.4e-42 177.9 181 57.5
arahy.Tifrunner.gnm1.ann1.6VP8YS Arachis hypogaea HOM05D004356 ORTHO05D005542 2.4e-37 160.6 122 67.2
arahy.Tifrunner.gnm1.ann1.H4UIY2 Arachis hypogaea HOM05D004356 ORTHO05D005542 6.3e-30 136.0 159 50.3
arahy.Tifrunner.gnm1.ann1.JXGW17 Arachis hypogaea HOM05D004356 ORTHO05D005542 6.3e-30 136.0 159 50.3
EL10As8g23848 Beta vulgaris HOM05D004356 ORTHO05D090264 2.4e-29 134.0 235 37.4
Cfa024383 Carpinus fangiana HOM05D004356 ORTHO05D124745 3.4e-20 103.6 163 39.9
arahy.Tifrunner.gnm1.ann1.8IDC4C Arachis hypogaea HOM05D004356 ORTHO05D005542 2.2e-11 74.3 51 70.6
SHI20361 Sapria himalayana HOM05D004356 ORTHO05D365714 1.4e-08 65.1 35 80.0
Zm00001eb297900 Zea mays HOM05D004356 ORTHO05D005542 2.6e-07 60.8 35 74.3
Zm00001eb297960 Zea mays HOM05D004356 ORTHO05D444542 2.6e-07 60.8 35 74.3


User provided reference genes

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