Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra17G0042600 Salix brachista HOM05D006342 ORTHO05D008155 4.9e-274 947.2 484 100.0
Sabra17G0037900 Salix brachista HOM05D006342 ORTHO05D008155 8.5e-258 893.3 527 89.6
Potri.017G050900 Populus trichocarpa HOM05D006342 ORTHO05D008155 1.5e-190 669.8 406 86.5
Sabra17G0037300 Salix brachista HOM05D006342 ORTHO05D008155 4.1e-180 635.2 358 92.5
Manes.07G034700 Manihot esculenta HOM05D006342 ORTHO05D008155 5.3e-135 485.3 364 68.7
QL11p022820 Quercus lobata HOM05D006342 ORTHO05D008155 3.9e-130 469.2 402 63.2
Ciclev10028615m.g Citrus clementina HOM05D006342 ORTHO05D008155 3.6e-123 446.0 379 63.6
Prupe.8G064500 Prunus persica HOM05D006342 ORTHO05D008155 2.3e-122 443.4 401 60.6
Gorai.005G222500 Gossypium raimondii HOM05D006342 ORTHO05D008155 2.6e-121 439.9 368 66.6
Lj4g0023834 Lotus japonicus HOM05D006342 ORTHO05D008155 4.4e-121 439.1 409 59.4
Gohir.D02G198600 Gossypium hirsutum HOM05D006342 ORTHO05D008155 3.7e-120 436.0 368 66.3
Lalb_Chr05g0217591 Lupinus albus HOM05D006342 ORTHO05D008155 6.3e-120 435.3 402 61.7
Gohir.A03G175100 Gossypium hirsutum HOM05D006342 ORTHO05D008155 1.1e-119 434.5 377 65.3
FAN02G0548 Fragaria x ananassa HOM05D006342 ORTHO05D008155 1.8e-119 433.7 417 58.3
Thecc.02G134500 Theobroma cacao HOM05D006342 ORTHO05D008155 1.2e-118 431.0 426 57.7
Actinidia24004 Actinidia chinensis HOM05D006342 ORTHO05D008155 2.0e-118 430.3 406 59.4
TWI23G0792 Tripterygium wilfordii HOM05D006342 ORTHO05D008155 3.5e-118 429.5 405 60.0
Duzib052G0010 Durio zibethinus HOM05D006342 ORTHO05D008155 5.0e-117 425.6 375 63.2
Dinv24174 Davidia involucrata HOM05D006342 ORTHO05D008155 6.5e-117 425.2 305 72.8
Atru.chr6.1184 Acer truncatum HOM05D006342 ORTHO05D008155 8.5e-117 424.9 432 58.8
RcHm_v2.0_Chr2g0143381 Rosa chinensis HOM05D006342 ORTHO05D008155 1.5e-116 424.1 403 59.8
Eucgr.G00932 Eucalyptus grandis HOM05D006342 ORTHO05D008155 1.9e-116 423.7 405 56.3
FvH4_6g33511 Fragaria vesca HOM05D006342 ORTHO05D008155 3.2e-116 422.9 404 60.4
CiPaw.05G033400 Carya illinoinensis HOM05D006342 ORTHO05D008155 9.4e-116 421.4 389 60.7
ClCG09G015650 Citrullus lanatus HOM05D006342 ORTHO05D008155 4.7e-115 419.1 331 65.3
DCAR_003711 Daucus carota HOM05D006342 ORTHO05D008155 4.7e-115 419.1 376 60.9
Carub.0002s0473 Capsella rubella HOM05D006342 ORTHO05D008155 1.8e-114 417.2 315 69.2
Psat7g100320 Pisum sativum HOM05D006342 ORTHO05D008155 1.8e-114 417.2 403 58.3
arahy.Tifrunner.gnm1.ann1.XZGJ82 Arachis hypogaea HOM05D006342 ORTHO05D008155 3.0e-114 416.4 281 75.4
Peaxi162Scf01060g00128 Petunia axillaris HOM05D006342 ORTHO05D008155 3.0e-114 416.4 368 63.9
VMungo0251G1514 Vigna mungo HOM05D006342 ORTHO05D008155 4.0e-114 416.0 349 64.5
Glyma.08G070600 Glycine max HOM05D006342 ORTHO05D008155 5.2e-114 415.6 408 59.1
Hma1.2p1_0522F.1_g171800 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 5.2e-114 415.6 350 65.1
CSS0025541 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 1.2e-113 414.5 402 58.7
Nitab4.5_0000863g0140 Nicotiana tabacum HOM05D006342 ORTHO05D008155 2.0e-113 413.7 311 70.7
Rhsim11G0137800 Rhododendron simsii HOM05D006342 ORTHO05D008155 2.0e-113 413.7 415 56.6
GSVIVG01015772001 Vitis vinifera HOM05D006342 ORTHO05D008155 2.0e-113 413.7 358 63.1
Glyma.13G042800 Glycine max HOM05D006342 ORTHO05D008155 2.6e-113 413.3 407 58.2
TPR.G35344 Trifolium pratense HOM05D006342 ORTHO05D008155 2.6e-113 413.3 302 71.5
Medtr4g094100 Medicago truncatula HOM05D006342 ORTHO05D008155 3.3e-113 412.9 307 70.7
PGR042G1699 Punica granatum HOM05D006342 ORTHO05D008155 3.3e-113 412.9 319 68.0
Ca_18366_v3 Cicer arietinum L. HOM05D003001 ORTHO05D003494 4.4e-113 412.5 354 61.6
RhsimUnG0187900 Rhododendron simsii HOM05D006342 ORTHO05D008155 4.4e-113 412.5 415 56.6
Nn5g30026 Nelumbo nucifera HOM05D006342 ORTHO05D008155 7.5e-113 411.8 303 70.0
AL2G16000 Arabidopsis lyrata HOM05D006342 ORTHO05D008155 9.7e-113 411.4 315 68.9
Nitab4.5_0003959g0010 Nicotiana tabacum HOM05D006342 ORTHO05D008155 8.2e-112 408.3 311 70.7
Thhalv10023528m.g Eutrema salsugineum HOM05D006342 ORTHO05D008155 1.8e-111 407.1 315 67.9
CAN.G523.45 Capsicum annuum HOM05D006342 ORTHO05D008155 3.1e-111 406.4 368 62.0
Oeu042410.2 Olea europaea HOM05D006342 ORTHO05D008155 3.1e-111 406.4 312 67.6
PGSC0003DMG400012575 Solanum tuberosum HOM05D006342 ORTHO05D008155 3.1e-111 406.4 369 61.5
MELO3C018621.2 Cucumis melo HOM05D006342 ORTHO05D008155 4.1e-111 406.0 352 61.9
CsaV3_7G006740 Cucumis sativus L. HOM05D006342 ORTHO05D008155 4.1e-111 406.0 352 61.9
ECA234G3624 Erigeron canadensis HOM05D006342 ORTHO05D008155 7.0e-111 405.2 367 59.9
AT1G60600 Arabidopsis thaliana HOM05D006342 ORTHO05D008155 2.0e-110 403.7 303 69.6
Sopen01g047960 Solanum pennellii HOM05D006342 ORTHO05D008155 2.0e-110 403.7 311 70.1
Lj9A350G66 Lonicera japonica HOM05D006342 ORTHO05D008155 2.7e-110 403.3 368 61.4
PSO447G0017 Papaver somniferum HOM05D006342 ORTHO05D008155 4.5e-110 402.5 315 67.0
arahy.Tifrunner.gnm1.ann1.U7PRNJ Arachis hypogaea HOM05D006342 ORTHO05D008155 5.9e-110 402.1 309 68.3
TAR628G1271 Trochodendron aralioides HOM05D006342 ORTHO05D008155 7.7e-110 401.7 302 69.2
BcaB04g20275 Brassica carinata HOM05D006342 ORTHO05D008155 1.0e-109 401.4 303 69.0
MSTRG.16600 Avicennia marina HOM05D006342 ORTHO05D008155 3.8e-109 399.4 404 54.5
Cc02_g21250 Coffea canephora HOM05D006342 ORTHO05D008155 3.8e-109 399.4 351 60.4
CANSAT21G1086 Cannabis sativa HOM05D006342 ORTHO05D008155 1.9e-108 397.1 402 57.0
COL.COLO4_32304 Corchorus olitorius HOM05D006342 ORTHO05D008155 2.5e-108 396.7 263 76.8
HanXRQChr10g0303621 Helianthus annuus HOM05D006342 ORTHO05D008155 2.5e-108 396.7 368 59.2
Lsat_1_v5_gn_5_108680 Lactuca sativa HOM05D006342 ORTHO05D008155 1.2e-107 394.4 375 59.7
Aa31LG2G9860 Aethionema arabicum HOM05D006342 ORTHO05D008155 1.0e-106 391.3 303 68.6
A01p29370 Brassica napus HOM05D006342 ORTHO05D008155 2.3e-106 390.2 304 67.4
BcaC09g49390 Brassica carinata HOM05D006342 ORTHO05D008155 5.2e-106 389.0 316 65.2
C01p37160 Brassica napus HOM05D006342 ORTHO05D008155 5.2e-106 389.0 316 65.2
BolC1t03681H Brassica oleracea HOM05D006342 ORTHO05D008155 5.2e-106 389.0 316 65.2
BraA01t03071Z Brassica rapa HOM05D006342 ORTHO05D008155 6.8e-106 388.7 304 67.8
MD10G1052500 Malus domestica HOM05D006342 ORTHO05D008155 1.5e-105 387.5 410 55.1
AUR62010160 Chenopodium quinoa HOM05D006342 ORTHO05D008155 7.5e-105 385.2 336 62.2
AUR62013159 Chenopodium quinoa HOM05D006342 ORTHO05D008155 3.7e-104 382.9 328 64.0
Cpa.g.sc42.26 Carica papaya HOM05D006342 ORTHO05D008155 8.3e-104 381.7 279 72.4
Sc15g0003050 Simmondsia chinensis HOM05D006342 ORTHO05D008155 9.1e-103 378.3 330 62.4
THA.LOC104799883 Tarenaya hassleriana HOM05D006342 ORTHO05D008155 9.1e-103 378.3 345 61.7
EL10Ac9g21517 Beta vulgaris HOM05D006342 ORTHO05D008155 2.7e-102 376.7 313 63.9
Migut.B00584 Erythranthe guttata HOM05D006342 ORTHO05D008155 1.9e-100 370.5 314 62.1
Solyc01g105460.4 Solanum lycopersicum HOM05D006342 ORTHO05D008155 7.2e-100 368.6 258 74.0
SGA_v2.0_scaffold83G26327 Striga asiatica HOM05D006342 ORTHO05D008155 9.5e-100 368.2 299 64.2
SalBow5G5605 Salvia bowleyana HOM05D006342 ORTHO05D008155 6.1e-99 365.5 311 61.4
unitig_0.g609 Utricularia gibba HOM05D006342 ORTHO05D008190 7.5e-97 358.6 315 61.0
Os03g0190100 Oryza sativa ssp. japonica HOM05D006342 ORTHO05D008155 1.1e-95 354.8 316 61.4
MBI05_g05612_MAGBIO Magnolia biondii HOM05D006342 ORTHO05D008155 7.0e-95 352.1 288 66.0
PSO210G1371 Papaver somniferum HOM05D006342 ORTHO05D008155 1.0e-93 348.2 250 71.2
vmacro01839 Vaccinium macrocarpon HOM05D006342 ORTHO05D008155 1.3e-93 347.8 459 47.5
Phvul.002G210750 Phaseolus vulgaris HOM05D006342 ORTHO05D008155 1.2e-91 341.3 315 60.0
Hund06370 Selenicereus undatus HOM05D006342 ORTHO05D008155 2.1e-91 340.5 253 69.6
Migut.B01155 Erythranthe guttata HOM05D006342 ORTHO05D008155 1.4e-90 337.8 305 58.0
FAN09G1871 Fragaria x ananassa HOM05D006342 ORTHO05D003187 1.8e-90 337.4 315 60.0
MSTRG.20291 Avicennia marina HOM05D006342 ORTHO05D008155 4.1e-87 326.2 308 55.8
HPP92_019303 Vanilla planifolia HOM05D006342 ORTHO05D008155 2.3e-85 320.5 333 54.7
Mapoly0112s0045 Marchantia polymorpha HOM05D006342 ORTHO05D008155 6.6e-85 318.9 307 55.4
Sed0004067 Sechium edule HOM05D006342 ORTHO05D008155 8.6e-85 318.5 324 56.8
Zm00001eb006830 Zea mays HOM05D006342 ORTHO05D008155 1.5e-84 317.8 321 56.1
QL11p022738 Quercus lobata HOM05D006342 ORTHO05D008155 8.0e-83 312.0 229 72.5
Pp3c15_22700 Physcomitrium patens HOM05D006342 ORTHO05D008155 3.1e-82 310.1 302 54.0
Migut.B01157 Erythranthe guttata HOM05D006342 ORTHO05D008155 1.3e-80 304.7 250 61.2
SMO364G0259 Selaginella moellendorffii HOM05D006342 ORTHO05D008155 5.4e-79 299.3 284 57.4
Oeu000253.3 Olea europaea HOM05D006342 ORTHO05D008155 2.1e-78 297.4 313 52.4
SpUN0430_0010 Schrenkiella parvula HOM05D006342 ORTHO05D008155 2.9e-72 276.9 227 65.6
FAN14G1047 Fragaria x ananassa HOM05D000343 ORTHO05D003187 2.1e-67 260.8 361 45.7
Hma1.2p1_0522F.1_g171810 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 6.4e-64 249.2 193 67.9
Ah.01g010100 Amaranthus hybridus HOM05D006342 ORTHO05D008155 5.4e-63 246.1 190 66.8
AagrBONN_evm.TU.Sc2ySwM_228.424 Anthoceros agrestis HOM05D006342 ORTHO05D008155 2.1e-62 244.2 326 44.2
CBR_g45392 Chara braunii HOM05D006342 ORTHO05D008155 1.6e-59 234.6 248 51.2
Haze_10585 Corylus avellana HOM05D006342 ORTHO05D008155 3.1e-58 230.3 277 52.0
AagrBONN_evm.TU.Sc2ySwM_117.3744 Anthoceros agrestis HOM05D006342 ORTHO05D008155 2.0e-57 227.6 300 44.7
PRCOL_00002739 Prasinoderma coloniale HOM05D006342 ORTHO05D008155 3.5e-54 216.9 247 50.2
SEGI_15165 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 1.2e-46 191.8 176 57.4
Cre04.g219787 Chlamydomonas reinhardtii HOM05D006342 ORTHO05D008155 2.1e-43 181.0 351 38.7
ATR0918G004 Amborella trichopoda HOM05D006342 ORTHO05D008155 3.4e-41 173.7 277 43.0
Aqoxy5G01924 Aquilegia oxysepala HOM05D006342 ORTHO05D008155 5.8e-33 146.4 126 63.5
SEGI_15059 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 6.9e-26 122.9 107 61.7
Glyma.10G123801 Glycine max HOM05D006342 ORTHO05D008155 1.1e-23 115.5 82 69.5
Glyma.16G064700 Glycine max HOM05D006342 ORTHO05D008155 1.1e-23 115.5 82 69.5
CSS0034348 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 3.6e-22 110.5 71 78.9
ATR0782G112 Amborella trichopoda HOM05D006342 ORTHO05D008155 5.5e-15 86.7 93 52.7
arahy.Tifrunner.gnm1.ann1.6J847D Arachis hypogaea HOM05D006342 ORTHO05D008155 4.7e-14 83.6 96 52.1
arahy.Tifrunner.gnm1.ann1.RT43SE Arachis hypogaea HOM05D006342 ORTHO05D008155 4.7e-14 83.6 96 52.1
arahy.Tifrunner.gnm1.ann1.2FS2S8 Arachis hypogaea HOM05D006342 ORTHO05D008155 6.1e-14 83.2 96 52.1
CARHR052370 Cardamine hirsuta HOM05D006342 ORTHO05D008155 2.3e-13 81.3 90 51.1
TAR376G0398 Trochodendron aralioides HOM05D000064 ORTHO05D001307 5.1e-13 80.1 56 71.4
Potri.001G311400 Populus trichocarpa HOM05D006342 ORTHO05D332779 1.8e-10 71.6 93 51.6
Eucgr.G00935 Eucalyptus grandis HOM05D006342 ORTHO05D008155 4.5e-09 67.0 128 34.4


User provided reference genes

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