Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra17G0040600 Salix brachista HOM05D001993 ORTHO05D009037 3.2e-222 775.0 468 100.0
Sabra17G0045400 Salix brachista HOM05D001993 ORTHO05D009037 8.0e-221 770.4 468 99.4
Potri.017G053400 Populus trichocarpa HOM05D001993 ORTHO05D009037 3.5e-216 755.0 468 92.3
Thecc.01G153800 Theobroma cacao HOM05D001993 ORTHO05D009037 2.3e-196 689.1 468 78.6
COL.COLO4_33613 Corchorus olitorius HOM05D001993 ORTHO05D009037 5.2e-196 688.0 468 82.7
Manes.11G063100 Manihot esculenta HOM05D001993 ORTHO05D009037 1.2e-195 686.8 468 85.0
Atru.chr13.159 Acer truncatum HOM05D001993 ORTHO05D009037 9.2e-193 677.2 468 82.7
Cpa.g.sc10.126 Carica papaya HOM05D001993 ORTHO05D009037 1.2e-192 676.8 468 79.5
Gorai.004G256300 Gossypium raimondii HOM05D001993 ORTHO05D009037 1.0e-191 673.7 468 77.4
Gohir.D08G240900 Gossypium hirsutum HOM05D001993 ORTHO05D009037 1.3e-191 673.3 468 79.9
CSS0028818 Camellia sinensis var. sinensis HOM05D001993 ORTHO05D009037 2.3e-191 672.5 468 83.5
MD17G1219000 Malus domestica HOM05D001993 ORTHO05D009037 8.6e-191 670.6 468 79.9
RcHm_v2.0_Chr2g0133701 Rosa chinensis HOM05D001993 ORTHO05D009037 2.5e-190 669.1 468 82.3
CiPaw.01G251700 Carya illinoinensis HOM05D001993 ORTHO05D009037 3.6e-189 665.2 468 81.8
Gohir.A08G221654 Gossypium hirsutum HOM05D001993 ORTHO05D009037 3.6e-189 665.2 466 77.7
Prupe.3G094500 Prunus persica HOM05D001993 ORTHO05D009037 2.3e-188 662.5 468 82.1
Oeu010088.1 Olea europaea HOM05D001993 ORTHO05D009037 2.6e-187 659.1 468 79.9
Haze_16628 Corylus avellana HOM05D001993 ORTHO05D009037 5.8e-187 657.9 468 80.8
Haze_16631 Corylus avellana HOM05D001993 ORTHO05D009037 1.4e-185 653.3 468 80.3
Cfa001914 Carpinus fangiana HOM05D001993 ORTHO05D009037 1.9e-185 652.9 468 80.6
CsaV3_7G032050 Cucumis sativus L. HOM05D001993 ORTHO05D009037 7.1e-185 651.0 468 79.1
Ciclev10025548m.g Citrus clementina HOM05D001993 ORTHO05D009037 1.2e-184 650.2 468 80.6
FvH4_6g29021 Fragaria vesca HOM05D001993 ORTHO05D009037 1.3e-183 646.7 468 79.5
Rhsim12G0188800 Rhododendron simsii HOM05D001993 ORTHO05D009037 1.3e-183 646.7 466 75.5
FAN09G0213 Fragaria x ananassa HOM05D001993 ORTHO05D009037 1.7e-183 646.4 468 79.5
Nitab4.5_0000233g0190 Nicotiana tabacum HOM05D001993 ORTHO05D009037 5.1e-183 644.8 468 74.6
Duzib147G1049 Durio zibethinus HOM05D001993 ORTHO05D009037 1.9e-182 642.9 468 75.2
Lj3g0005746 Lotus japonicus HOM05D001993 ORTHO05D009037 1.9e-182 642.9 468 79.5
vmacro16868 Vaccinium macrocarpon HOM05D001993 ORTHO05D009037 1.9e-182 642.9 468 78.4
FAN05G0323 Fragaria x ananassa HOM05D001993 ORTHO05D009037 4.3e-182 641.7 468 79.1
MSTRG.22779 Avicennia marina HOM05D001993 ORTHO05D009037 7.3e-182 641.0 468 78.6
CANSAT56G0483 Cannabis sativa HOM05D001993 ORTHO05D009037 9.5e-182 640.6 468 76.9
Sed0024162 Sechium edule HOM05D001993 ORTHO05D009037 1.2e-181 640.2 468 74.4
Lalb_Chr14g0373981 Lupinus albus HOM05D001993 ORTHO05D009037 2.1e-181 639.4 468 78.6
TAR625G0584 Trochodendron aralioides HOM05D001993 ORTHO05D009037 2.8e-181 639.0 468 78.0
MELO3C023452.2 Cucumis melo HOM05D001993 ORTHO05D009037 4.7e-181 638.3 468 78.0
ClCG09G003170 Citrullus lanatus HOM05D001993 ORTHO05D009037 4.0e-180 635.2 468 78.2
Hma1.2p1_0109F.1_g052250 Hydrangea macrophylla HOM05D001993 ORTHO05D009037 1.2e-179 633.6 468 82.5
Peaxi162Scf00108g00131 Petunia axillaris HOM05D001993 ORTHO05D009037 1.5e-179 633.3 468 73.5
Eucgr.J03091 Eucalyptus grandis HOM05D001993 ORTHO05D009037 4.4e-179 631.7 468 78.0
TPR.G8903 Trifolium pratense HOM05D001993 ORTHO05D009037 5.8e-179 631.3 468 78.2
Sopen09g006100 Solanum pennellii HOM05D001993 ORTHO05D009037 9.9e-179 630.6 468 73.9
TPR.G19157 Trifolium pratense HOM05D001993 ORTHO05D009037 9.9e-179 630.6 468 76.3
TWI12G1056 Tripterygium wilfordii HOM05D001993 ORTHO05D009037 9.9e-179 630.6 468 78.4
VMungo1080G1544 Vigna mungo HOM05D001993 ORTHO05D009037 9.9e-179 630.6 468 78.2
Phvul.005G181200 Phaseolus vulgaris HOM05D001993 ORTHO05D009037 1.3e-178 630.2 468 78.2
Glyma.15G004900 Glycine max HOM05D001993 ORTHO05D009037 1.7e-178 629.8 468 78.4
Psat5g303960 Pisum sativum HOM05D001993 ORTHO05D009037 2.9e-178 629.0 468 73.7
Ca_01029_v3 Cicer arietinum L. HOM05D001993 ORTHO05D009037 1.1e-177 627.1 468 78.4
PGSC0003DMG400024263 Solanum tuberosum HOM05D001993 ORTHO05D009037 1.4e-177 626.7 468 73.5
Medtr2g104760 Medicago truncatula HOM05D001993 ORTHO05D009037 2.1e-176 622.9 468 77.1
CAN.G697.13 Capsicum annuum HOM05D001993 ORTHO05D009037 2.7e-176 622.5 468 72.9
Solyc09g011370.3 Solanum lycopersicum HOM05D001993 ORTHO05D009037 3.5e-176 622.1 468 72.4
Migut.I00727 Erythranthe guttata HOM05D001993 ORTHO05D009037 6.0e-176 621.3 468 72.9
Nn8g39702 Nelumbo nucifera HOM05D001993 ORTHO05D009037 1.0e-175 620.5 468 76.3
Lj5C77T4 Lonicera japonica HOM05D001993 ORTHO05D009037 1.7e-175 619.8 468 76.9
QL05p033907 Quercus lobata HOM05D001993 ORTHO05D009037 8.7e-175 617.5 492 75.2
ATR0767G064 Amborella trichopoda HOM05D001993 ORTHO05D009037 7.3e-174 614.4 468 74.6
Glyma.13G368900 Glycine max HOM05D001993 ORTHO05D009037 1.1e-172 610.5 395 74.7
PGR031G2325 Punica granatum HOM05D001993 ORTHO05D009037 1.8e-172 609.8 468 76.7
GSVIVG01017521001 Vitis vinifera HOM05D001993 ORTHO05D009037 2.2e-170 602.8 468 75.0
SalBow7G0151 Salvia bowleyana HOM05D001993 ORTHO05D009037 1.1e-169 600.5 469 74.2
Cc04_g04800 Coffea canephora HOM05D001993 ORTHO05D009037 3.2e-169 599.0 467 74.9
Aqoxy7G03544 Aquilegia oxysepala HOM05D001993 ORTHO05D009037 2.3e-167 592.8 470 73.2
Aa31LG4G850 Aethionema arabicum HOM05D001993 ORTHO05D009037 3.0e-167 592.4 468 71.2
Nitab4.5_0005460g0010 Nicotiana tabacum HOM05D001993 ORTHO05D009037 1.5e-166 590.1 468 69.9
Actinidia30712 Actinidia chinensis HOM05D001993 ORTHO05D009037 2.5e-166 589.3 418 81.1
ECA246G3767 Erigeron canadensis HOM05D001993 ORTHO05D009037 2.8e-165 585.9 468 67.5
Lsat_1_v5_gn_5_7881 Lactuca sativa HOM05D001993 ORTHO05D009037 2.4e-164 582.8 468 69.7
HanXRQChr05g0140811 Helianthus annuus HOM05D001993 ORTHO05D009037 6.9e-164 581.3 468 66.0
AT1G80570 Arabidopsis thaliana HOM05D001993 ORTHO05D009037 2.0e-163 579.7 468 70.3
Ah.01g006660 Amaranthus hybridus HOM05D001993 ORTHO05D009037 3.4e-163 578.9 468 72.0
THA.LOC104808190 Tarenaya hassleriana HOM05D001993 ORTHO05D009037 2.9e-162 575.9 396 69.9
arahy.Tifrunner.gnm1.ann1.8N7B8R Arachis hypogaea HOM05D001993 ORTHO05D009037 1.5e-158 563.5 466 70.8
SEGI_33239 Sequoiadendron giganteum HOM05D001993 ORTHO05D009037 2.5e-158 562.8 468 68.2
BcaC03g15951 Brassica carinata HOM05D001993 ORTHO05D009037 3.3e-158 562.4 468 69.9
BolC2t09726H Brassica oleracea HOM05D001993 ORTHO05D009037 8.1e-157 557.8 468 69.4
AUR62016603 Chenopodium quinoa HOM05D001993 ORTHO05D009037 6.9e-156 554.7 468 70.5
CDE05G1651 Ceratophyllum demersum HOM05D001993 ORTHO05D009037 2.6e-155 552.7 468 68.8
AUR62011454 Chenopodium quinoa HOM05D001993 ORTHO05D009037 5.8e-155 551.6 468 70.1
unitig_0.g1110 Utricularia gibba HOM05D001993 ORTHO05D009037 5.8e-155 551.6 466 68.9
Carub.0002s2697 Capsella rubella HOM05D001993 ORTHO05D009037 1.1e-153 547.4 468 64.5
AL2G40860 Arabidopsis lyrata HOM05D001993 ORTHO05D009037 2.7e-152 542.7 468 61.8
Dinv38158 Davidia involucrata HOM05D001993 ORTHO05D004040 3.9e-151 538.9 325 79.1
BcaB05g25256 Brassica carinata HOM05D001993 ORTHO05D009037 4.5e-147 525.4 469 67.4
Sp5g35200 Schrenkiella parvula HOM05D001993 ORTHO05D009037 2.2e-146 523.1 468 61.5
Thhalv10018507m.g Eutrema salsugineum HOM05D001993 ORTHO05D009037 5.5e-145 518.5 469 60.8
CARHR073940 Cardamine hirsuta HOM05D001993 ORTHO05D009037 3.8e-138 495.7 469 64.4
Hund06538 Selenicereus undatus HOM05D001993 ORTHO05D009037 1.4e-135 487.3 284 81.0
Sc12g0006740 Simmondsia chinensis HOM05D001993 ORTHO05D009037 3.0e-135 486.1 396 74.0
A02p23440 Brassica napus HOM05D002499 ORTHO05D009037 1.4e-132 477.2 468 63.2
BraA02t07336Z Brassica rapa HOM05D002499 ORTHO05D002812 1.2e-128 464.2 466 62.0
C02p37140 Brassica napus HOM05D002499 ORTHO05D002812 6.1e-128 461.8 468 62.2
Nn2g12225 Nelumbo nucifera HOM05D001993 ORTHO05D009037 4.4e-118 429.1 369 59.3
Nn2g12227 Nelumbo nucifera HOM05D001993 ORTHO05D009037 8.5e-114 414.8 474 54.9
SalBow6G3135 Salvia bowleyana HOM05D001993 ORTHO05D009037 1.2e-107 394.4 270 69.3
FAN05G0349 Fragaria x ananassa HOM05D001993 ORTHO05D009037 1.5e-105 387.5 392 66.1
SMO137G0150 Selaginella moellendorffii HOM05D001993 ORTHO05D009037 5.6e-81 305.8 398 43.5
FAN02G3408 Fragaria x ananassa HOM05D001993 ORTHO05D009037 6.8e-79 298.9 214 69.2
Os12g0517100 Oryza sativa ssp. japonica HOM05D001993 ORTHO05D009037 1.6e-72 277.7 407 39.6
Os12g0516900 Oryza sativa ssp. japonica HOM05D001993 ORTHO05D009037 1.7e-69 267.7 397 39.3
Os12g0517000 Oryza sativa ssp. japonica HOM05D001993 ORTHO05D009037 1.0e-66 258.5 406 37.9
Os04g0370600 Oryza sativa ssp. japonica HOM05D001993 ORTHO05D009037 4.3e-65 253.1 404 36.1
Os04g0370500 Oryza sativa ssp. japonica HOM05D001993 ORTHO05D009037 5.4e-52 209.5 409 34.2
Mapoly0145s0024 Marchantia polymorpha HOM05D001993 ORTHO05D009037 5.6e-49 199.5 408 30.9
Os02g0798900 Oryza sativa ssp. japonica HOM05D001993 ORTHO05D009037 6.0e-43 179.5 196 44.9
Os12g0526600 Oryza sativa ssp. japonica HOM05D001993 ORTHO05D009037 1.3e-37 161.8 203 39.9
Os04g0371600 Oryza sativa ssp. japonica HOM05D001993 ORTHO05D009037 1.9e-36 157.9 291 34.4
BcaB05g22992 Brassica carinata HOM05D001993 ORTHO05D009037 1.9e-33 147.9 120 60.0
Os04g0370300 Oryza sativa ssp. japonica HOM05D001993 ORTHO05D009037 1.1e-28 132.1 194 36.6
Os02g0798800 Oryza sativa ssp. japonica HOM05D001993 ORTHO05D009037 1.2e-22 112.1 177 37.3
SEGI_05713 Sequoiadendron giganteum HOM05D001905 ORTHO05D001820 3.9e-10 70.5 402 23.1
HanXRQChr03g0079911 Helianthus annuus HOM05D002762 ORTHO05D004643 8.8e-10 69.3 306 24.5
COL.COLO4_13978 Corchorus olitorius HOM05D002762 ORTHO05D004643 2.0e-09 68.2 204 30.4
Hund15983 Selenicereus undatus HOM05D000530 ORTHO05D003341 3.3e-09 67.4 378 23.0
Duzib151G0782 Durio zibethinus HOM05D002762 ORTHO05D004643 1.3e-08 65.5 202 29.7
BcaC06g32936 Brassica carinata HOM05D002762 ORTHO05D004643 1.1e-07 62.4 355 26.2
SMO228G0132 Selaginella moellendorffii HOM05D002762 ORTHO05D004643 1.1e-07 62.4 212 27.8
HanXRQChr10g0281201 Helianthus annuus HOM05D005998 ORTHO05D007664 2.4e-07 61.2 362 24.0
Duzib052G0700 Durio zibethinus HOM05D002762 ORTHO05D004643 3.1e-07 60.8 204 27.5
Sp5g12030 Schrenkiella parvula HOM05D001905 ORTHO05D001820 7.0e-07 59.7 363 25.1
Thecc.04G271300 Theobroma cacao HOM05D002762 ORTHO05D004643 7.0e-07 59.7 208 27.4
Sopen08g020490 Solanum pennellii HOM05D002813 ORTHO05D003203 4.5e-06 57.0 343 23.3
VMungo0647G0746 Vigna mungo HOM05D002125 ORTHO05D002105 4.5e-06 57.0 258 24.4
Gohir.D09G232700 Gossypium hirsutum HOM05D002762 ORTHO05D004643 5.9e-06 56.6 204 25.0
Gorai.006G255600 Gossypium raimondii HOM05D002762 ORTHO05D004643 5.9e-06 56.6 204 25.0
ECA236G1847 Erigeron canadensis HOM05D005998 ORTHO05D007664 7.7e-06 56.2 217 24.0


User provided reference genes

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