Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra17G0037900 Salix brachista HOM05D006342 ORTHO05D008155 2.4e-298 1028.1 527 100.0
Sabra17G0042600 Salix brachista HOM05D006342 ORTHO05D008155 1.6e-257 892.5 527 89.6
Potri.017G050900 Populus trichocarpa HOM05D006342 ORTHO05D008155 3.2e-186 655.6 448 78.6
Sabra17G0037300 Salix brachista HOM05D006342 ORTHO05D008155 5.0e-179 631.7 358 92.2
Manes.07G034700 Manihot esculenta HOM05D006342 ORTHO05D008155 1.4e-133 480.7 364 68.4
QL11p022820 Quercus lobata HOM05D006342 ORTHO05D008155 3.5e-124 449.5 356 67.4
Ciclev10028615m.g Citrus clementina HOM05D006342 ORTHO05D008155 4.3e-122 442.6 372 63.7
Gorai.005G222500 Gossypium raimondii HOM05D006342 ORTHO05D008155 2.1e-121 440.3 379 65.2
Gohir.D02G198600 Gossypium hirsutum HOM05D006342 ORTHO05D008155 3.1e-120 436.4 379 64.9
Gohir.A03G175100 Gossypium hirsutum HOM05D006342 ORTHO05D008155 2.0e-119 433.7 384 64.1
Lj4g0023834 Lotus japonicus HOM05D006342 ORTHO05D008155 2.2e-118 430.3 445 56.0
Thecc.02G134500 Theobroma cacao HOM05D006342 ORTHO05D008155 2.9e-118 429.9 381 61.9
Prupe.8G064500 Prunus persica HOM05D006342 ORTHO05D008155 3.8e-118 429.5 443 55.1
Lalb_Chr05g0217591 Lupinus albus HOM05D006342 ORTHO05D008155 1.1e-117 427.9 304 74.0
TWI23G0792 Tripterygium wilfordii HOM05D006342 ORTHO05D008155 1.6e-116 424.1 385 61.0
Dinv24174 Davidia involucrata HOM05D006342 ORTHO05D008155 2.1e-116 423.7 305 72.8
Atru.chr6.1184 Acer truncatum HOM05D006342 ORTHO05D008155 3.5e-116 422.9 395 62.0
Duzib052G0010 Durio zibethinus HOM05D006342 ORTHO05D008155 3.5e-116 422.9 375 62.9
Actinidia24004 Actinidia chinensis HOM05D006342 ORTHO05D008155 6.0e-116 422.2 359 63.2
Peaxi162Scf01060g00128 Petunia axillaris HOM05D006342 ORTHO05D008155 1.1e-114 417.9 368 64.1
Carub.0002s0473 Capsella rubella HOM05D006342 ORTHO05D008155 1.9e-114 417.2 344 66.0
ClCG09G015650 Citrullus lanatus HOM05D006342 ORTHO05D008155 1.9e-114 417.2 331 65.6
RcHm_v2.0_Chr2g0143381 Rosa chinensis HOM05D006342 ORTHO05D008155 1.9e-114 417.2 355 64.2
CSS0025541 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 3.3e-114 416.4 383 60.8
DCAR_003711 Daucus carota HOM05D006342 ORTHO05D008155 4.3e-114 416.0 373 61.4
Eucgr.G00932 Eucalyptus grandis HOM05D006342 ORTHO05D008155 4.3e-114 416.0 368 59.8
FAN02G0548 Fragaria x ananassa HOM05D006342 ORTHO05D008155 7.3e-114 415.2 355 63.1
arahy.Tifrunner.gnm1.ann1.XZGJ82 Arachis hypogaea HOM05D006342 ORTHO05D008155 9.6e-114 414.8 281 75.4
Psat7g100320 Pisum sativum HOM05D006342 ORTHO05D008155 9.6e-114 414.8 303 70.6
AL2G16000 Arabidopsis lyrata HOM05D006342 ORTHO05D008155 1.3e-113 414.5 315 69.5
Nitab4.5_0000863g0140 Nicotiana tabacum HOM05D006342 ORTHO05D008155 1.3e-113 414.5 311 71.1
Hma1.2p1_0522F.1_g171800 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 3.6e-113 412.9 350 65.4
GSVIVG01015772001 Vitis vinifera HOM05D006342 ORTHO05D008155 4.8e-113 412.5 305 70.2
VMungo0251G1514 Vigna mungo HOM05D006342 ORTHO05D008155 6.2e-113 412.1 334 66.2
TPR.G35344 Trifolium pratense HOM05D006342 ORTHO05D008155 8.1e-113 411.8 302 71.5
Medtr4g094100 Medicago truncatula HOM05D006342 ORTHO05D008155 1.4e-112 411.0 307 70.7
Rhsim11G0137800 Rhododendron simsii HOM05D006342 ORTHO05D008155 1.8e-112 410.6 452 52.9
FvH4_6g33511 Fragaria vesca HOM05D006342 ORTHO05D008155 2.4e-112 410.2 314 68.8
Nn5g30026 Nelumbo nucifera HOM05D006342 ORTHO05D008155 2.4e-112 410.2 303 69.6
PGSC0003DMG400012575 Solanum tuberosum HOM05D006342 ORTHO05D008155 2.4e-112 410.2 369 62.3
PGR042G1699 Punica granatum HOM05D006342 ORTHO05D008155 3.1e-112 409.8 319 67.7
RhsimUnG0187900 Rhododendron simsii HOM05D006342 ORTHO05D008155 4.0e-112 409.5 452 52.9
Nitab4.5_0003959g0010 Nicotiana tabacum HOM05D006342 ORTHO05D008155 5.3e-112 409.1 311 71.1
Thhalv10023528m.g Eutrema salsugineum HOM05D006342 ORTHO05D008155 6.9e-112 408.7 315 68.3
AT1G60600 Arabidopsis thaliana HOM05D006342 ORTHO05D008155 2.0e-111 407.1 303 70.3
Ca_18366_v3 Cicer arietinum L. HOM05D003001 ORTHO05D003494 2.0e-111 407.1 304 69.4
Oeu042410.2 Olea europaea HOM05D006342 ORTHO05D008155 2.0e-111 407.1 312 68.3
Glyma.08G070600 Glycine max HOM05D006342 ORTHO05D008155 4.5e-111 406.0 306 70.3
Sopen01g047960 Solanum pennellii HOM05D006342 ORTHO05D008155 4.5e-111 406.0 371 63.1
CAN.G523.45 Capsicum annuum HOM05D006342 ORTHO05D008155 5.8e-111 405.6 311 69.1
Glyma.13G042800 Glycine max HOM05D006342 ORTHO05D008155 5.8e-111 405.6 306 69.9
BcaB04g20275 Brassica carinata HOM05D006342 ORTHO05D008155 9.9e-111 404.8 303 69.6
ECA234G3624 Erigeron canadensis HOM05D006342 ORTHO05D008155 9.9e-111 404.8 374 58.8
MELO3C018621.2 Cucumis melo HOM05D006342 ORTHO05D008155 2.2e-110 403.7 352 61.9
CsaV3_7G006740 Cucumis sativus L. HOM05D006342 ORTHO05D008155 2.2e-110 403.7 352 61.9
CiPaw.05G033400 Carya illinoinensis HOM05D006342 ORTHO05D008155 1.1e-109 401.4 426 54.9
Lj9A350G66 Lonicera japonica HOM05D006342 ORTHO05D008155 1.1e-109 401.4 364 61.3
arahy.Tifrunner.gnm1.ann1.U7PRNJ Arachis hypogaea HOM05D006342 ORTHO05D008155 1.9e-109 400.6 309 68.3
TAR628G1271 Trochodendron aralioides HOM05D006342 ORTHO05D008155 3.2e-109 399.8 302 68.9
PSO447G0017 Papaver somniferum HOM05D006342 ORTHO05D008155 4.2e-109 399.4 315 66.3
Cc02_g21250 Coffea canephora HOM05D006342 ORTHO05D008155 1.2e-108 397.9 344 61.9
Aa31LG2G9860 Aethionema arabicum HOM05D006342 ORTHO05D008155 3.5e-108 396.4 303 69.6
COL.COLO4_32304 Corchorus olitorius HOM05D006342 ORTHO05D008155 3.5e-108 396.4 263 76.4
HanXRQChr10g0303621 Helianthus annuus HOM05D006342 ORTHO05D008155 3.5e-108 396.4 381 57.5
A01p29370 Brassica napus HOM05D006342 ORTHO05D008155 2.3e-107 393.7 304 68.1
BcaC09g49390 Brassica carinata HOM05D006342 ORTHO05D008155 6.7e-107 392.1 316 65.8
C01p37160 Brassica napus HOM05D006342 ORTHO05D008155 6.7e-107 392.1 316 65.8
BolC1t03681H Brassica oleracea HOM05D006342 ORTHO05D008155 6.7e-107 392.1 316 65.8
BraA01t03071Z Brassica rapa HOM05D006342 ORTHO05D008155 6.7e-107 392.1 304 68.4
Lsat_1_v5_gn_5_108680 Lactuca sativa HOM05D006342 ORTHO05D008155 1.1e-106 391.3 375 59.2
MSTRG.16600 Avicennia marina HOM05D006342 ORTHO05D008155 1.3e-105 387.9 318 62.9
MD10G1052500 Malus domestica HOM05D006342 ORTHO05D008155 6.2e-105 385.6 335 63.3
AUR62010160 Chenopodium quinoa HOM05D006342 ORTHO05D008155 1.1e-104 384.8 336 62.2
AUR62013159 Chenopodium quinoa HOM05D006342 ORTHO05D008155 2.4e-104 383.6 389 58.1
CANSAT21G1086 Cannabis sativa HOM05D006342 ORTHO05D008155 6.9e-104 382.1 352 61.1
Sc15g0003050 Simmondsia chinensis HOM05D006342 ORTHO05D008155 1.5e-103 380.9 330 62.1
Cpa.g.sc42.26 Carica papaya HOM05D006342 ORTHO05D008155 3.4e-103 379.8 279 72.4
EL10Ac9g21517 Beta vulgaris HOM05D006342 ORTHO05D008155 4.5e-103 379.4 313 64.2
THA.LOC104799883 Tarenaya hassleriana HOM05D006342 ORTHO05D008155 4.9e-102 375.9 311 66.6
SGA_v2.0_scaffold83G26327 Striga asiatica HOM05D006342 ORTHO05D008155 9.3e-101 371.7 299 64.9
Migut.B00584 Erythranthe guttata HOM05D006342 ORTHO05D008155 1.2e-100 371.3 314 62.4
Solyc01g105460.4 Solanum lycopersicum HOM05D006342 ORTHO05D008155 2.1e-100 370.5 313 65.8
SalBow5G5605 Salvia bowleyana HOM05D006342 ORTHO05D008155 1.0e-99 368.2 311 61.7
unitig_0.g609 Utricularia gibba HOM05D006342 ORTHO05D008190 1.1e-96 358.2 315 61.3
Os03g0190100 Oryza sativa ssp. japonica HOM05D006342 ORTHO05D008155 1.3e-94 351.3 316 60.8
MBI05_g05612_MAGBIO Magnolia biondii HOM05D006342 ORTHO05D008155 2.9e-94 350.1 288 65.6
PSO210G1371 Papaver somniferum HOM05D006342 ORTHO05D008155 1.2e-92 344.7 250 70.4
vmacro01839 Vaccinium macrocarpon HOM05D006342 ORTHO05D008155 2.1e-92 344.0 489 45.2
Hund06370 Selenicereus undatus HOM05D006342 ORTHO05D008155 7.9e-92 342.0 253 69.6
Migut.B01155 Erythranthe guttata HOM05D006342 ORTHO05D008155 1.3e-91 341.3 305 58.7
Phvul.002G210750 Phaseolus vulgaris HOM05D006342 ORTHO05D008155 5.7e-90 335.9 254 67.7
FAN09G1871 Fragaria x ananassa HOM05D006342 ORTHO05D003187 1.6e-89 334.3 315 59.7
MSTRG.20291 Avicennia marina HOM05D006342 ORTHO05D008155 4.5e-87 326.2 308 56.2
Sed0004067 Sechium edule HOM05D006342 ORTHO05D008155 2.7e-84 317.0 264 63.6
HPP92_019303 Vanilla planifolia HOM05D006342 ORTHO05D008155 3.6e-84 316.6 333 54.4
Mapoly0112s0045 Marchantia polymorpha HOM05D006342 ORTHO05D008155 4.6e-84 316.2 307 55.0
Zm00001eb006830 Zea mays HOM05D006342 ORTHO05D008155 4.6e-84 316.2 321 55.8
QL11p022738 Quercus lobata HOM05D006342 ORTHO05D008155 3.3e-82 310.1 229 72.5
Pp3c15_22700 Physcomitrium patens HOM05D006342 ORTHO05D008155 5.7e-82 309.3 302 54.0
Migut.B01157 Erythranthe guttata HOM05D006342 ORTHO05D008155 1.3e-81 308.1 250 62.0
Oeu000253.3 Olea europaea HOM05D006342 ORTHO05D008155 7.7e-79 298.9 313 52.7
SMO364G0259 Selaginella moellendorffii HOM05D006342 ORTHO05D008155 3.8e-78 296.6 284 57.0
SpUN0430_0010 Schrenkiella parvula HOM05D006342 ORTHO05D008155 1.8e-72 277.7 227 66.1
FAN14G1047 Fragaria x ananassa HOM05D000343 ORTHO05D003187 2.0e-66 257.7 314 49.7
Hma1.2p1_0522F.1_g171810 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 1.6e-63 248.1 193 67.9
Ah.01g010100 Amaranthus hybridus HOM05D006342 ORTHO05D008155 3.8e-62 243.4 190 65.8
AagrBONN_evm.TU.Sc2ySwM_228.424 Anthoceros agrestis HOM05D006342 ORTHO05D008155 1.1e-61 241.9 326 44.2
CBR_g45392 Chara braunii HOM05D006342 ORTHO05D008155 1.0e-59 235.3 248 51.6
Haze_10585 Corylus avellana HOM05D006342 ORTHO05D008155 3.7e-57 226.9 277 51.6
AagrBONN_evm.TU.Sc2ySwM_117.3744 Anthoceros agrestis HOM05D006342 ORTHO05D008155 1.1e-56 225.3 300 44.7
PRCOL_00002739 Prasinoderma coloniale HOM05D006342 ORTHO05D008155 1.0e-54 218.8 236 52.1
SEGI_15165 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 3.8e-46 190.3 176 56.8
Cre04.g219787 Chlamydomonas reinhardtii HOM05D006342 ORTHO05D008155 1.6e-44 184.9 351 39.3
ATR0918G004 Amborella trichopoda HOM05D006342 ORTHO05D008155 3.7e-41 173.7 277 43.0
Aqoxy5G01924 Aquilegia oxysepala HOM05D006342 ORTHO05D008155 1.4e-32 145.2 126 62.7
SEGI_15059 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 2.9e-25 120.9 107 60.7
Glyma.10G123801 Glycine max HOM05D006342 ORTHO05D008155 2.7e-23 114.4 82 69.5
Glyma.16G064700 Glycine max HOM05D006342 ORTHO05D008155 2.7e-23 114.4 82 69.5
CSS0034348 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 1.0e-22 112.5 71 81.7
ATR0782G112 Amborella trichopoda HOM05D006342 ORTHO05D008155 4.6e-15 87.0 93 52.7
CARHR052370 Cardamine hirsuta HOM05D006342 ORTHO05D008155 6.6e-14 83.2 90 53.3
arahy.Tifrunner.gnm1.ann1.6J847D Arachis hypogaea HOM05D006342 ORTHO05D008155 1.1e-13 82.4 96 52.1
arahy.Tifrunner.gnm1.ann1.RT43SE Arachis hypogaea HOM05D006342 ORTHO05D008155 1.1e-13 82.4 96 52.1
arahy.Tifrunner.gnm1.ann1.2FS2S8 Arachis hypogaea HOM05D006342 ORTHO05D008155 1.5e-13 82.0 96 52.1
TAR376G0398 Trochodendron aralioides HOM05D000064 ORTHO05D001307 7.3e-13 79.7 56 69.6
Potri.001G311400 Populus trichocarpa HOM05D006342 ORTHO05D332779 2.0e-10 71.6 93 51.6
Eucgr.G00935 Eucalyptus grandis HOM05D006342 ORTHO05D008155 3.0e-06 57.8 55 54.5


User provided reference genes

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