Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra17G0023400 Salix brachista HOM05D004311 ORTHO05D005145 9.1e-187 656.8 332 100.0
Sabra17G0023900 Salix brachista HOM05D004311 ORTHO05D005145 2.8e-175 618.6 345 91.9
Potri.017G036200 Populus trichocarpa HOM05D004311 ORTHO05D005145 1.7e-161 572.8 347 85.3
Potri.007G124150 Populus trichocarpa HOM05D004311 ORTHO05D005145 4.8e-135 485.0 346 75.4
Manes.11G116001 Manihot esculenta HOM05D004311 ORTHO05D005145 2.1e-98 363.2 348 59.8
Ciclev10019191m.g Citrus clementina HOM05D004311 ORTHO05D005145 5.9e-85 318.5 354 53.1
Atru.chr5.2612 Acer truncatum HOM05D004311 ORTHO05D005145 3.8e-84 315.8 338 53.8
Actinidia35905 Actinidia chinensis HOM05D004311 ORTHO05D005145 1.9e-83 313.5 324 53.4
Atru.chr3.1596 Acer truncatum HOM05D004311 ORTHO05D005145 3.2e-83 312.8 340 53.2
Dinv44218 Davidia involucrata HOM05D004311 ORTHO05D005145 2.3e-81 306.6 324 55.6
Haze_00714 Corylus avellana HOM05D004311 ORTHO05D005145 3.3e-80 302.8 344 49.1
COL.COLO4_24387 Corchorus olitorius HOM05D004311 ORTHO05D005145 4.4e-80 302.4 358 52.2
CiPaw.01G102900 Carya illinoinensis HOM05D004311 ORTHO05D005145 2.8e-79 299.7 339 50.7
TWI34G1341 Tripterygium wilfordii HOM05D004311 ORTHO05D005145 1.1e-78 297.7 339 52.5
Gorai.011G145800 Gossypium raimondii HOM05D004311 ORTHO05D005145 1.8e-78 297.0 343 52.8
Gohir.D10G132100 Gossypium hirsutum HOM05D004311 ORTHO05D005145 2.4e-78 296.6 343 52.8
QL10p045440 Quercus lobata HOM05D004311 ORTHO05D005145 2.4e-78 296.6 437 43.0
Lj6A60T46 Lonicera japonica HOM05D004311 ORTHO05D005145 9.1e-78 294.7 350 51.4
Thecc.04G184200 Theobroma cacao HOM05D004311 ORTHO05D005145 2.0e-77 293.5 339 50.7
Gohir.A10G134400 Gossypium hirsutum HOM05D004311 ORTHO05D005145 3.5e-77 292.7 343 51.9
FAN17G0085 Fragaria x ananassa HOM05D004311 ORTHO05D005145 4.5e-77 292.4 343 49.6
Rhsim09G0031800 Rhododendron simsii HOM05D004311 ORTHO05D005145 7.7e-77 291.6 348 49.4
RcHm_v2.0_Chr4g0407531 Rosa chinensis HOM05D004311 ORTHO05D005145 1.3e-76 290.8 347 50.1
Cfa015780 Carpinus fangiana HOM05D004311 ORTHO05D005145 1.7e-76 290.4 334 48.5
GSVIVG01013563001 Vitis vinifera HOM05D004311 ORTHO05D005145 2.5e-75 286.6 328 50.6
Duzib268G0197 Durio zibethinus HOM05D004311 ORTHO05D005145 3.2e-75 286.2 302 55.0
FAN07G0445 Fragaria x ananassa HOM05D004311 ORTHO05D005145 3.2e-75 286.2 343 49.3
FvH4_4g11290 Fragaria vesca HOM05D004311 ORTHO05D005145 7.2e-75 285.0 339 49.3
Peaxi162Scf00319g00915 Petunia axillaris HOM05D004311 ORTHO05D005145 9.4e-75 284.6 347 50.1
vmacro00589 Vaccinium macrocarpon HOM05D004311 ORTHO05D005145 9.4e-75 284.6 327 51.4
Actinidia33018 Actinidia chinensis HOM05D004311 ORTHO05D005145 6.1e-74 282.0 306 52.3
Sopen09g036480 Solanum pennellii HOM05D004311 ORTHO05D005145 3.0e-73 279.6 345 48.4
MD04G1038300 Malus domestica HOM05D004311 ORTHO05D005145 4.0e-73 279.3 297 53.9
Glyma.20G245800 Glycine max HOM05D004311 ORTHO05D005145 1.5e-72 277.3 322 51.2
Eucgr.A00251 Eucalyptus grandis HOM05D004311 ORTHO05D005145 2.6e-72 276.6 349 48.4
Solyc09g098560.2 Solanum lycopersicum HOM05D004311 ORTHO05D005145 4.4e-72 275.8 345 48.1
CANSAT11G1749 Cannabis sativa HOM05D004311 ORTHO05D005145 2.2e-71 273.5 340 47.4
CAN.G710.65 Capsicum annuum HOM05D004311 ORTHO05D005145 2.8e-71 273.1 353 48.2
Ca_11399_v3 Cicer arietinum L. HOM05D004311 ORTHO05D005145 4.8e-71 272.3 357 47.6
Ca_11402_v3 Cicer arietinum L. HOM05D004311 ORTHO05D005145 4.8e-71 272.3 357 47.6
Ca_29593_v3 Cicer arietinum L. HOM05D004311 ORTHO05D005145 4.8e-71 272.3 357 47.6
Nitab4.5_0006710g0020 Nicotiana tabacum HOM05D004311 ORTHO05D005145 8.3e-71 271.6 297 51.5
Nitab4.5_0000526g0040 Nicotiana tabacum HOM05D004311 ORTHO05D005145 2.4e-70 270.0 297 51.5
Glyma.10G295800 Glycine max HOM05D004311 ORTHO05D005145 3.1e-70 269.6 323 49.2
Lalb_Chr21g0307601 Lupinus albus HOM05D004311 ORTHO05D005145 5.9e-69 265.4 329 48.9
PGR083G0820 Punica granatum HOM05D004311 ORTHO05D005145 5.9e-69 265.4 348 46.8
arahy.Tifrunner.gnm1.ann1.D3CYL9 Arachis hypogaea HOM05D004311 ORTHO05D005145 1.0e-68 264.6 337 48.7
Psat6g241440 Pisum sativum HOM05D004311 ORTHO05D005145 1.7e-68 263.8 303 51.5
Cc03_g13030 Coffea canephora HOM05D004311 ORTHO05D005145 6.5e-68 261.9 304 49.7
Medtr1g116530 Medicago truncatula HOM05D004311 ORTHO05D005145 8.6e-68 261.5 321 48.6
arahy.Tifrunner.gnm1.ann1.TTS68P Arachis hypogaea HOM05D004311 ORTHO05D005145 1.1e-67 261.2 337 48.4
Lj5g0018220 Lotus japonicus HOM05D004311 ORTHO05D005145 5.5e-67 258.8 329 46.8
Lsat_1_v5_gn_6_54900 Lactuca sativa HOM05D004311 ORTHO05D005145 2.8e-66 256.5 306 47.7
THA.LOC104821356 Tarenaya hassleriana HOM05D004311 ORTHO05D005145 1.8e-65 253.8 332 47.9
SHI06503 Sapria himalayana HOM05D004311 ORTHO05D005145 2.3e-65 253.4 348 46.3
TPR.G10413 Trifolium pratense HOM05D004311 ORTHO05D005145 3.0e-65 253.1 310 49.4
TAR375G1135 Trochodendron aralioides HOM05D004311 ORTHO05D005145 2.0e-64 250.4 354 44.6
Nn2g11494 Nelumbo nucifera HOM05D004311 ORTHO05D005145 2.8e-63 246.5 306 48.0
SalBow3G3821 Salvia bowleyana HOM05D004311 ORTHO05D005145 6.3e-63 245.4 325 45.2
ClCG07G015850 Citrullus lanatus HOM05D004311 ORTHO05D005145 1.4e-62 244.2 328 46.6
Phvul.007G004100 Phaseolus vulgaris HOM05D004311 ORTHO05D005145 1.4e-62 244.2 321 47.0
Hund12225 Selenicereus undatus HOM05D004311 ORTHO05D005145 7.0e-62 241.9 316 46.5
MELO3C017696.2 Cucumis melo HOM05D004311 ORTHO05D005145 2.0e-61 240.4 353 44.8
SGA_v2.0_scaffold12G06156 Striga asiatica HOM05D004311 ORTHO05D005145 2.0e-61 240.4 301 48.2
VMungo0720G0448 Vigna mungo HOM05D004311 ORTHO05D005145 3.5e-61 239.6 314 46.8
Sed0012126 Sechium edule HOM05D004311 ORTHO05D005145 4.5e-61 239.2 318 48.4
CsaV3_4G003570 Cucumis sativus L. HOM05D004311 ORTHO05D005145 5.9e-61 238.8 327 45.9
MSTRG.20570 Avicennia marina HOM05D004311 ORTHO05D005145 5.0e-60 235.7 329 45.3
EL10Ac3g06308 Beta vulgaris HOM05D004311 ORTHO05D005145 6.6e-60 235.3 330 44.2
CDE02G0781 Ceratophyllum demersum HOM05D004311 ORTHO05D005145 2.1e-58 230.3 348 40.2
Aqoxy5G04052 Aquilegia oxysepala HOM05D004311 ORTHO05D005145 4.7e-58 229.2 318 45.0
HanXRQChr07g0186701 Helianthus annuus HOM05D004311 ORTHO05D005145 1.0e-57 228.0 342 42.7
MBI08_g33649_MAGBIO Magnolia biondii HOM05D004311 ORTHO05D005145 1.4e-57 227.6 345 42.6
AUR62030033 Chenopodium quinoa HOM05D004311 ORTHO05D005145 2.3e-57 226.9 330 42.4
Migut.G01038 Erythranthe guttata HOM05D004311 ORTHO05D005145 3.0e-57 226.5 286 47.6
AUR62002610 Chenopodium quinoa HOM05D004311 ORTHO05D005145 1.5e-56 224.2 330 42.4
CDE09G0340 Ceratophyllum demersum HOM05D004311 ORTHO05D005145 2.0e-56 223.8 329 40.4
DCAR_028443 Daucus carota HOM05D004311 ORTHO05D005145 2.0e-56 223.8 349 41.8
Prupe.1G189100 Prunus persica HOM05D004311 ORTHO05D005145 1.3e-55 221.1 257 50.6
Cpa.g.sc73.18 Carica papaya HOM05D004311 ORTHO05D005145 2.9e-55 219.9 230 55.2
Sc19g0002150 Simmondsia chinensis HOM05D004311 ORTHO05D005145 8.3e-55 218.4 346 40.2
unitig_8.g3035 Utricularia gibba HOM05D004311 ORTHO05D005145 9.2e-54 214.9 315 41.3
FAN22G0235 Fragaria x ananassa HOM05D004311 ORTHO05D005820 1.2e-53 214.5 261 51.3
Sp4g24640 Schrenkiella parvula HOM05D004311 ORTHO05D005145 3.0e-52 209.9 304 42.8
BcaNung03232 Brassica carinata HOM05D004311 ORTHO05D005145 5.0e-52 209.1 306 40.5
Carub.0004s2496 Capsella rubella HOM05D004311 ORTHO05D005145 4.7e-50 202.6 315 41.3
Zm00001eb248350 Zea mays HOM05D004311 ORTHO05D005145 6.2e-50 202.2 313 39.9
HPP92_009171 Vanilla planifolia HOM05D004311 ORTHO05D005145 8.0e-50 201.8 300 40.7
BcaC02g12437 Brassica carinata HOM05D004311 ORTHO05D005145 1.8e-49 200.7 305 41.0
A05p03080 Brassica napus HOM05D004311 ORTHO05D005145 2.3e-49 200.3 309 40.5
ATR0743G139 Amborella trichopoda HOM05D004311 ORTHO05D005145 1.2e-48 198.0 300 41.3
BraA05t19299Z Brassica rapa HOM05D004311 ORTHO05D005145 1.5e-48 197.6 305 40.3
BcaC02g07234 Brassica carinata HOM05D004311 ORTHO05D005145 2.9e-47 193.4 329 38.3
Aa31LG2G1780 Aethionema arabicum HOM05D004311 ORTHO05D005145 3.7e-47 193.0 311 40.5
AT1G54380 Arabidopsis thaliana HOM05D004311 ORTHO05D005145 6.4e-47 192.2 301 42.5
C04p03710 Brassica napus HOM05D004311 ORTHO05D005145 6.4e-47 192.2 306 37.9
BolC4t22005H Brassica oleracea HOM05D004311 ORTHO05D005145 6.4e-47 192.2 306 37.9
Nitab4.5_0004962g0030 Nicotiana tabacum HOM05D004311 ORTHO05D005145 6.4e-47 192.2 289 42.9
C04p69770 Brassica napus HOM05D004311 ORTHO05D005145 8.3e-47 191.8 302 40.1
Os11g0293300 Oryza sativa ssp. japonica HOM05D004311 ORTHO05D005145 1.4e-46 191.0 296 40.2
PSO675G5961 Papaver somniferum HOM05D004311 ORTHO05D005145 1.2e-45 188.0 297 41.1
Dinv22688 Davidia involucrata HOM05D004311 ORTHO05D005145 2.3e-44 183.7 268 42.2
CARHR055450 Cardamine hirsuta HOM05D004311 ORTHO05D005145 2.5e-43 180.3 308 40.3
SEGI_09077 Sequoiadendron giganteum HOM05D004311 ORTHO05D005145 2.8e-42 176.8 308 36.4
PSO017G7323 Papaver somniferum HOM05D004311 ORTHO05D005145 1.1e-41 174.9 297 40.4
Lalb_Chr02g0144311 Lupinus albus HOM05D004311 ORTHO05D005145 2.0e-40 170.6 329 39.2
Haze_00722 Corylus avellana HOM05D001997 ORTHO05D004620 7.5e-40 168.7 191 49.7
Pp3c18_5230 Physcomitrium patens HOM05D004311 ORTHO05D005145 8.3e-39 165.2 360 33.3
TWI60G0507 Tripterygium wilfordii HOM05D004311 ORTHO05D005145 3.0e-36 156.8 192 48.4
BcaB06g29252 Brassica carinata HOM05D004311 ORTHO05D005145 2.0e-32 144.1 281 34.9
BcaNung05216 Brassica carinata HOM05D004311 ORTHO05D005145 2.0e-32 144.1 281 34.9
SMO273G0052 Selaginella moellendorffii HOM05D004311 ORTHO05D005145 7.6e-32 142.1 282 34.4
SMO351G0426 Selaginella moellendorffii HOM05D004311 ORTHO05D005145 7.6e-32 142.1 284 33.8
AagrBONN_evm.TU.Sc2ySwM_228.1282 Anthoceros agrestis HOM05D004311 ORTHO05D005145 9.9e-32 141.7 428 29.7
CBR_g48670 Chara braunii HOM05D004311 ORTHO05D005145 3.5e-29 133.3 406 27.3
SMO174G0256 Selaginella moellendorffii HOM05D004311 ORTHO05D005145 1.3e-28 131.3 299 32.1
Thhalv10017985m.g Eutrema salsugineum HOM05D004311 ORTHO05D005145 3.3e-27 126.7 227 38.3
TWI60G1520 Tripterygium wilfordii HOM05D004311 ORTHO05D005145 2.1e-26 124.0 152 48.7
Oeu007717.1 Olea europaea HOM05D004311 ORTHO05D005145 3.6e-26 123.2 108 56.5
Mapoly0064s0042 Marchantia polymorpha HOM05D004311 ORTHO05D005145 3.1e-17 93.6 99 50.5
BcaNung00544 Brassica carinata HOM05D004311 ORTHO05D005145 5.3e-17 92.8 88 50.0
Prupe.1G188800 Prunus persica HOM05D004311 ORTHO05D005145 9.9e-16 88.6 108 49.1
Duzib151G0942 Durio zibethinus HOM05D004311 ORTHO05D005145 4.2e-14 83.2 58 65.5
MCO03G002 Micromonas commoda HOM05D004311 ORTHO05D005145 1.2e-13 81.6 289 27.0
Nitab4.5_0001049g0080 Nicotiana tabacum HOM05D004311 ORTHO05D005145 1.1e-11 75.1 93 46.2
CARHR137590 Cardamine hirsuta HOM05D004311 ORTHO05D005145 5.6e-11 72.8 53 66.0
BolC4t28477H Brassica oleracea HOM05D004311 ORTHO05D005145 4.0e-09 66.6 52 53.8
SGA_v2.0_scaffold290G47298 Striga asiatica HOM05D002786 ORTHO05D003493 3.4e-08 63.5 59 54.2
Cre09.g405650 Chlamydomonas reinhardtii HOM05D004311 ORTHO05D005145 1.7e-07 61.2 68 44.1
SEGI_08315 Sequoiadendron giganteum HOM05D004311 ORTHO05D005145 4.2e-06 56.6 53 52.8
TAR374G0043 Trochodendron aralioides HOM05D004311 ORTHO05D005145 5.5e-06 56.2 51 54.9


User provided reference genes

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